RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W DAM1P53267 343 aa5.85□□□□□ -1.47
RER1YCL001W YDL124WQ07551 312 aaKnown RBP5.85□□□□□ -1.47
RER1YCL001W THI21Q08975 551 aa5.85□□□□□ -1.47
RER1YCL001W RSF2P46974 1380 aa5.84□□□□□ -1.47
RER1YCL001W SIC1P38634 284 aa5.84□□□□□ -1.47
RER1YCL001W RSC3Q06639 885 aa5.84□□□□□ -1.47
RER1YCL001W BDF2Q07442 638 aa5.84□□□□□ -1.47
RER1YCL001W SLM3Q12093 417 aa5.84□□□□□ -1.47
RER1YCL001W TIM54P47045 478 aa5.83□□□□□ -1.48
RER1YCL001W YGR125WP53273 1036 aa5.83□□□□□ -1.48
RER1YCL001W LGE1Q02796 332 aaKnown RBP5.83□□□□□ -1.48
RER1YCL001W REH1Q06709 432 aa5.83□□□□□ -1.48
RER1YCL001W GPR1Q12361 961 aa5.83□□□□□ -1.48
RER1YCL001W ROM2P51862 1356 aaKnown RBP5.82□□□□□ -1.48
RER1YCL001W TOM70P07213 617 aaKnown RBP5.82□□□□□ -1.48
RER1YCL001W LAT1P12695 482 aaKnown RBP5.82□□□□□ -1.48
RER1YCL001W SET5P38890 526 aaKnown RBP5.82□□□□□ -1.48
RER1YCL001W HUL4P40985 892 aa5.82□□□□□ -1.48
RER1YCL001W IRC13Q08630 104 aa5.82□□□□□ -1.48
RER1YCL001W TGL5Q12043 749 aa5.82□□□□□ -1.48
RER1YCL001W NDJ1Q12366 352 aa5.82□□□□□ -1.48
RER1YCL001W URB1P34241 1764 aaKnown RBP5.81□□□□□ -1.48
RER1YCL001W GFA1P14742 717 aaKnown RBP5.81□□□□□ -1.48
RER1YCL001W SAP190P36123 1033 aa5.81□□□□□ -1.48
RER1YCL001W YHR020WP38708 688 aaKnown RBP5.81□□□□□ -1.48
RER1YCL001W PCL5P38794 229 aa5.81□□□□□ -1.48
RER1YCL001W HSV2P50079 448 aaPredicted RBP5.81□□□□□ -1.48
RER1YCL001W SUT2Q12286 268 aa5.81□□□□□ -1.48
RER1YCL001W RPS24AP0CX31 135 aaKnown RBP5.8□□□□□ -1.48
RER1YCL001W RPS24BP0CX32 135 aaKnown RBP5.8□□□□□ -1.48
RER1YCL001W YEF3P16521 1044 aaKnown RBP5.8□□□□□ -1.48
RER1YCL001W BET3P36149 193 aa5.8□□□□□ -1.48
RER1YCL001W DOT5P40553 215 aa5.8□□□□□ -1.48
RER1YCL001W ALG2P43636 503 aa5.8□□□□□ -1.48
RER1YCL001W YJL049WP47048 450 aa5.8□□□□□ -1.48
RER1YCL001W ATP25Q03153 612 aa5.8□□□□□ -1.48
RER1YCL001W SGO1Q08490 590 aa5.8□□□□□ -1.48
RER1YCL001W ATG11Q12527 1178 aa5.8□□□□□ -1.48
RER1YCL001W TDP1P38319 544 aa5.79□□□□□ -1.48
RER1YCL001W FMP52P40008 231 aa5.79□□□□□ -1.48
RER1YCL001W HOS4P40480 1083 aa5.79□□□□□ -1.48
RER1YCL001W YDR514CQ04408 483 aa5.79□□□□□ -1.48
RER1YCL001W FLC1Q08967 793 aa5.79□□□□□ -1.48
RER1YCL001W YBR182C-AQ8TGU6 64 aa5.79□□□□□ -1.48
RER1YCL001W CDC43P18898 376 aa5.78□□□□□ -1.48
RER1YCL001W BCD1P38772 366 aa5.78□□□□□ -1.48
RER1YCL001W TAH11P47112 604 aa5.78□□□□□ -1.48
RER1YCL001W HXT16P47185 567 aa5.78□□□□□ -1.48
RER1YCL001W VPS73P53142 486 aaKnown RBP5.78□□□□□ -1.48
RER1YCL001W ASM4Q05166 528 aa5.78□□□□□ -1.48
RER1YCL001W MET7Q08645 548 aa5.78□□□□□ -1.48
RER1YCL001W YBR259WP38338 688 aa5.77□□□□□ -1.49
RER1YCL001W TEL2P53038 688 aa5.77□□□□□ -1.49
RER1YCL001W ZIP2P53061 704 aa5.77□□□□□ -1.49
RER1YCL001W ORC1P54784 914 aaPredicted RBP5.77□□□□□ -1.49
RER1YCL001W TAP42Q04372 366 aa5.77□□□□□ -1.49
RER1YCL001W YRF1-3P0CX14 1859 aa5.77□□□□□ -1.49
RER1YCL001W YRF1-7P0CX15 1859 aa5.77□□□□□ -1.49
RER1YCL001W YRF1-6P53819 1859 aa5.77□□□□□ -1.49
RER1YCL001W APC1P53886 1748 aa5.77□□□□□ -1.49
RER1YCL001W YIL177CP40434 1758 aa5.76□□□□□ -1.49
RER1YCL001W YJL225CP40889 1758 aa5.76□□□□□ -1.49
RER1YCL001W HCA4P20448 770 aaKnown RBP5.76□□□□□ -1.49
RER1YCL001W HIS7P33734 552 aaKnown RBP5.76□□□□□ -1.49
RER1YCL001W BAP3P41815 604 aa5.76□□□□□ -1.49
RER1YCL001W RPN11P43588 306 aaKnown RBP5.76□□□□□ -1.49
RER1YCL001W MTR3P48240 250 aaPredicted RBP5.76□□□□□ -1.49
RER1YCL001W MHP1P43638 1398 aa5.76□□□□□ -1.49
RER1YCL001W FKS3Q04952 1785 aa5.75□□□□□ -1.49
RER1YCL001W KIN3P22209 435 aa5.75□□□□□ -1.49
RER1YCL001W GRX4P32642 244 aa5.75□□□□□ -1.49
RER1YCL001W SPC29P33419 253 aa5.75□□□□□ -1.49
RER1YCL001W YKL133CP36066 463 aa5.75□□□□□ -1.49
RER1YCL001W ECM1P39715 212 aa5.75□□□□□ -1.49
RER1YCL001W RLP7P40693 322 aaKnown RBP5.75□□□□□ -1.49
RER1YCL001W ZDS1P50111 915 aaKnown RBP5.75□□□□□ -1.49
RER1YCL001W UBC11P52492 156 aa5.75□□□□□ -1.49
RER1YCL001W RTA1P53047 317 aa5.75□□□□□ -1.49
RER1YCL001W SSL2Q00578 843 aa5.75□□□□□ -1.49
RER1YCL001W SIR4P11978 1358 aa5.75□□□□□ -1.49
RER1YCL001W DIF1O13577 133 aa5.74□□□□□ -1.49
RER1YCL001W NPR2P39923 615 aa5.74□□□□□ -1.49
RER1YCL001W RSP5P39940 809 aaKnown RBP5.74□□□□□ -1.49
RER1YCL001W SHR5P41912 237 aa5.74□□□□□ -1.49
RER1YCL001W AUS1Q08409 1394 aa5.74□□□□□ -1.49
RER1YCL001W CAN1P04817 590 aa5.73□□□□□ -1.49
RER1YCL001W PHR1P05066 565 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
RER1YCL001W PPZ2P33329 710 aa5.73□□□□□ -1.49
RER1YCL001W YKR075CP36155 307 aa5.73□□□□□ -1.49
RER1YCL001W ENP1P38333 483 aaKnown RBP5.73□□□□□ -1.49
RER1YCL001W TY4A-JP47023 414 aa5.73□□□□□ -1.49
RER1YCL001W HUL5P53119 910 aa5.73□□□□□ -1.49
RER1YCL001W TEX1P53851 422 aaKnown RBP5.73□□□□□ -1.49
RER1YCL001W SMX3P54999 86 aaPredicted RBP5.73□□□□□ -1.49
RER1YCL001W GAD1Q04792 585 aa5.73□□□□□ -1.49
RER1YCL001W SEC3P33332 1336 aaKnown RBP5.73□□□□□ -1.49
RER1YCL001W MET6P05694 767 aaKnown RBP5.72□□□□□ -1.49
RER1YCL001W TUB1P09733 447 aaKnown RBP5.72□□□□□ -1.49
RER1YCL001W HIR1P32479 840 aa5.72□□□□□ -1.49
RER1YCL001W PEX2P32800 271 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms