RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	PAN2	P53010	1115 aa	Predicted RBP	5.97	□□□□□ -1.45
UBS1	YBR165W	SMX3	P54999	86 aa	Predicted RBP	5.97	□□□□□ -1.45
UBS1	YBR165W	MRH1	Q12117	320 aa	Predicted RBP	5.97	□□□□□ -1.45
UBS1	YBR165W	DCS2	Q12123	353 aa		5.97	□□□□□ -1.45
UBS1	YBR165W	PYC1	P11154	1178 aa	Known RBP	5.96	□□□□□ -1.46
UBS1	YBR165W	MVD1	P32377	396 aa	Known RBP	5.96	□□□□□ -1.46
UBS1	YBR165W	APN2	P38207	520 aa		5.96	□□□□□ -1.46
UBS1	YBR165W	FHN1	P53279	174 aa		5.96	□□□□□ -1.46
UBS1	YBR165W	GUD1	Q07729	489 aa		5.96	□□□□□ -1.46
UBS1	YBR165W	PEX1	P24004	1043 aa		5.95	□□□□□ -1.46
UBS1	YBR165W	SFP1	P32432	683 aa		5.95	□□□□□ -1.46
UBS1	YBR165W	AKL1	P38080	1108 aa	Known RBP	5.95	□□□□□ -1.46
UBS1	YBR165W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.95	□□□□□ -1.46	not detected
UBS1	YBR165W	NOP9	P47077	666 aa	Known RBP	5.95	□□□□□ -1.46
UBS1	YBR165W	RGC1	Q06108	1083 aa	Known RBP	5.95	□□□□□ -1.46
UBS1	YBR165W	SFB3	P38810	929 aa		5.94	□□□□□ -1.46
UBS1	YBR165W	DNM1	P54861	757 aa		5.94	□□□□□ -1.46
UBS1	YBR165W	CBR1	P38626	284 aa	Known RBP	5.93	□□□□□ -1.46
UBS1	YBR165W	CRP1	P38845	465 aa	Known RBP	5.93	□□□□□ -1.46
UBS1	YBR165W	SDA1	P53313	767 aa	Known RBP	5.93	□□□□□ -1.46
UBS1	YBR165W	SEC6	P32844	805 aa		5.92	□□□□□ -1.46
UBS1	YBR165W	PHO11	P35842	467 aa		5.92	□□□□□ -1.46
UBS1	YBR165W	MAL31	P38156	614 aa		5.92	□□□□□ -1.46
UBS1	YBR165W	UBS1	P38290	277 aa		5.92	□□□□□ -1.46
UBS1	YBR165W	PHO12	P38693	467 aa		5.92	□□□□□ -1.46
UBS1	YBR165W	BEM4	P39011	633 aa		5.92	□□□□□ -1.46
UBS1	YBR165W	RSC8	P43609	557 aa	Known RBP	5.92	□□□□□ -1.46
UBS1	YBR165W	GPD1	Q00055	391 aa	Known RBP	5.92	□□□□□ -1.46
UBS1	YBR165W	THI22	Q06490	572 aa		5.92	□□□□□ -1.46
UBS1	YBR165W	CLF1	Q12309	687 aa	Predicted RBP	5.92	□□□□□ -1.46
UBS1	YBR165W	YHR202W	P38887	602 aa		5.91	□□□□□ -1.46
UBS1	YBR165W	NDC80	P40460	691 aa		5.91	□□□□□ -1.46
UBS1	YBR165W	DIA2	Q08496	732 aa	Predicted RBP	5.91	□□□□□ -1.46
UBS1	YBR165W	TAF3	Q12297	353 aa		5.91	□□□□□ -1.46
UBS1	YBR165W	ZRT2	Q12436	422 aa		5.91	□□□□□ -1.46
UBS1	YBR165W	CDC43	P18898	376 aa		5.9	□□□□□ -1.46
UBS1	YBR165W	KIN3	P22209	435 aa		5.9	□□□□□ -1.46
UBS1	YBR165W	YPT7	P32939	208 aa		5.9	□□□□□ -1.46
UBS1	YBR165W	CKB2	P38930	258 aa		5.9	□□□□□ -1.46
UBS1	YBR165W	NUG1	P40010	520 aa	Known RBP	5.9	□□□□□ -1.46
UBS1	YBR165W	YNL195C	P40168	261 aa		5.9	□□□□□ -1.46
UBS1	YBR165W	VPS73	P53142	486 aa	Known RBP	5.9	□□□□□ -1.46
UBS1	YBR165W	COX18	P53239	316 aa		5.9	□□□□□ -1.46
UBS1	YBR165W	MLH3	Q12083	715 aa		5.9	□□□□□ -1.46
UBS1	YBR165W	SUT2	Q12286	268 aa		5.9	□□□□□ -1.46
UBS1	YBR165W	ECM3	Q99252	613 aa		5.9	□□□□□ -1.46
UBS1	YBR165W	ADR1	P07248	1323 aa		5.9	□□□□□ -1.47
UBS1	YBR165W	GFA1	P14742	717 aa	Known RBP	5.89	□□□□□ -1.47
UBS1	YBR165W	BIT2	P38346	545 aa		5.89	□□□□□ -1.47
UBS1	YBR165W	ARG2	P40360	574 aa		5.89	□□□□□ -1.47
UBS1	YBR165W	CCT7	P42943	550 aa	Known RBP	5.89	□□□□□ -1.47
UBS1	YBR165W	ATG4	P53867	494 aa		5.89	□□□□□ -1.47
UBS1	YBR165W	ISA1	Q07821	250 aa	Predicted RBP	5.89	□□□□□ -1.47
UBS1	YBR165W	THR1	P17423	357 aa	Known RBP	5.88	□□□□□ -1.47
UBS1	YBR165W	BCS1	P32839	456 aa		5.88	□□□□□ -1.47
UBS1	YBR165W	TDP1	P38319	544 aa		5.88	□□□□□ -1.47
UBS1	YBR165W	YJL206C	P39529	758 aa		5.88	□□□□□ -1.47
UBS1	YBR165W	RET2	P43621	546 aa		5.88	□□□□□ -1.47
UBS1	YBR165W	TAH11	P47112	604 aa		5.88	□□□□□ -1.47
UBS1	YBR165W	CTR1	P49573	406 aa		5.88	□□□□□ -1.47
UBS1	YBR165W	PRP28	P23394	588 aa		5.87	□□□□□ -1.47
UBS1	YBR165W	DMC1	P25453	334 aa		5.87	□□□□□ -1.47
UBS1	YBR165W	PET127	P32606	800 aa		5.87	□□□□□ -1.47
UBS1	YBR165W	GLG1	P36143	616 aa		5.87	□□□□□ -1.47
UBS1	YBR165W	FPR3	P38911	411 aa	Known RBP	5.87	□□□□□ -1.47
UBS1	YBR165W	BDH2	P39713	417 aa		5.87	□□□□□ -1.47
UBS1	YBR165W	YJR096W	P47137	282 aa		5.87	□□□□□ -1.47
UBS1	YBR165W	IMG2	P25642	146 aa	Predicted RBP	5.86	□□□□□ -1.47
UBS1	YBR165W	HLJ1	P48353	224 aa		5.86	□□□□□ -1.47
UBS1	YBR165W	THI73	Q07904	523 aa		5.86	□□□□□ -1.47
UBS1	YBR165W	VHS3	Q08438	674 aa		5.86	□□□□□ -1.47
UBS1	YBR165W	POM34	Q12445	299 aa		5.86	□□□□□ -1.47
UBS1	YBR165W	FRS1	P15624	595 aa	Known RBP	5.85	□□□□□ -1.47
UBS1	YBR165W	HCA4	P20448	770 aa	Known RBP	5.85	□□□□□ -1.47
UBS1	YBR165W	YPT53	P36019	220 aa		5.85	□□□□□ -1.47
UBS1	YBR165W	YKR075C	P36155	307 aa		5.85	□□□□□ -1.47
UBS1	YBR165W	TDA3	P38758	523 aa		5.85	□□□□□ -1.47
UBS1	YBR165W	PIG2	P40187	538 aa		5.85	□□□□□ -1.47
UBS1	YBR165W	CCT5	P40413	562 aa	Known RBP	5.85	□□□□□ -1.47
UBS1	YBR165W	YJR142W	P47173	342 aa		5.85	□□□□□ -1.47
UBS1	YBR165W	VPS36	Q06696	566 aa		5.85	□□□□□ -1.47
UBS1	YBR165W	CHS5	Q12114	671 aa	Known RBP	5.85	□□□□□ -1.47
UBS1	YBR165W	ERG20	P08524	352 aa	Known RBP	5.84	□□□□□ -1.47
UBS1	YBR165W	SWI6	P09959	803 aa		5.84	□□□□□ -1.47
UBS1	YBR165W	YKU70	P32807	602 aa		5.84	□□□□□ -1.47
UBS1	YBR165W	TYS1	P36421	394 aa	Known RBP	5.84	□□□□□ -1.47
UBS1	YBR165W	BIT61	P47041	543 aa		5.84	□□□□□ -1.47
UBS1	YBR165W	YLR407W	Q06070	228 aa		5.84	□□□□□ -1.47
UBS1	YBR165W	USV1	Q12132	391 aa		5.84	□□□□□ -1.47
UBS1	YBR165W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	not detected
UBS1	YBR165W	FEN2	P25621	512 aa	Known RBP	5.83	□□□□□ -1.48
UBS1	YBR165W	SET3	P36124	751 aa		5.83	□□□□□ -1.48
UBS1	YBR165W	YIL166C	P40445	542 aa		5.83	□□□□□ -1.48
UBS1	YBR165W	PMT3	P47190	753 aa		5.83	□□□□□ -1.48
UBS1	YBR165W	YNR029C	P53729	429 aa	Known RBP	5.83	□□□□□ -1.48
UBS1	YBR165W	YMR210W	Q03649	449 aa		5.83	□□□□□ -1.48
UBS1	YBR165W	MTQ2	Q03920	221 aa	Predicted RBP	5.83	□□□□□ -1.48
UBS1	YBR165W	PRP19	P32523	503 aa	Known RBP	5.82	□□□□□ -1.48
UBS1	YBR165W	BFA1	P47113	574 aa		5.82	□□□□□ -1.48
UBS1	YBR165W	DOS2	P54858	310 aa		5.82	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms