RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W YDR476CQ03362 224 aa7.5□□□□□ -1.21
TOD6YBL054W ADY3Q07732 790 aa7.5□□□□□ -1.21
TOD6YBL054W RIX7Q07844 837 aaKnown RBP7.5□□□□□ -1.21
TOD6YBL054W YOR389WQ08912 624 aa7.5□□□□□ -1.21
TOD6YBL054W YPL277CQ08989 487 aa7.5□□□□□ -1.21
TOD6YBL054W PGK1P00560 416 aaKnown RBP7.49□□□□□ -1.21
TOD6YBL054W NPP1P25353 742 aa7.49□□□□□ -1.21
TOD6YBL054W SRO9P25567 434 aaKnown RBP7.49□□□□□ -1.21
TOD6YBL054W KAR4P25583 335 aa7.49□□□□□ -1.21
TOD6YBL054W RRN6P32786 894 aa7.49□□□□□ -1.21
TOD6YBL054W CUE2P36075 443 aaKnown RBP7.49□□□□□ -1.21
TOD6YBL054W UTP22P53254 1237 aaPredicted RBP7.49□□□□□ -1.21
TOD6YBL054W KTR5P53966 522 aaPredicted RBP7.49□□□□□ -1.21
TOD6YBL054W FOX2Q02207 900 aaKnown RBP7.49□□□□□ -1.21
TOD6YBL054W MUB1Q03162 620 aa7.49□□□□□ -1.21
TOD6YBL054W YDR179W-AQ03983 463 aa7.49□□□□□ -1.21
TOD6YBL054W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21not detected
TOD6YBL054W YLR053CQ12026 108 aa7.49□□□□□ -1.21
TOD6YBL054W RRD2Q12461 358 aa7.49□□□□□ -1.21
TOD6YBL054W SEM1O94742 89 aa7.48□□□□□ -1.21
TOD6YBL054W ILV1P00927 576 aaKnown RBP7.48□□□□□ -1.21
TOD6YBL054W MPH2P0CD99 609 aa7.48□□□□□ -1.21
TOD6YBL054W SNT1P25357 1226 aa7.48□□□□□ -1.21
TOD6YBL054W PHO87P25360 923 aa7.48□□□□□ -1.21
TOD6YBL054W RRT12P25381 491 aa7.48□□□□□ -1.21
TOD6YBL054W MGT1P26188 188 aa7.48□□□□□ -1.21
TOD6YBL054W SPT16P32558 1035 aaKnown RBP7.48□□□□□ -1.21
TOD6YBL054W BCK2P33306 851 aa7.48□□□□□ -1.21
TOD6YBL054W PRK1P40494 810 aa7.48□□□□□ -1.21
TOD6YBL054W CAB2P40506 365 aa7.48□□□□□ -1.21
TOD6YBL054W NSG2P53898 299 aa7.48□□□□□ -1.21
TOD6YBL054W FUS2Q05670 677 aa7.48□□□□□ -1.21
TOD6YBL054W BCP1Q06338 283 aa7.48□□□□□ -1.21
TOD6YBL054W DIA2Q08496 732 aaPredicted RBP7.48□□□□□ -1.21
TOD6YBL054W ENV9Q08651 330 aa7.48□□□□□ -1.21
TOD6YBL054W FKS1P38631 1876 aaKnown RBP7.48□□□□□ -1.21
TOD6YBL054W CDC33P07260 213 aaKnown RBP7.47□□□□□ -1.21
TOD6YBL054W SSC1P0CS90 654 aaKnown RBP7.47□□□□□ -1.21
TOD6YBL054W CLB2P24869 491 aa7.47□□□□□ -1.21
TOD6YBL054W DGR2P32330 852 aa7.47□□□□□ -1.21
TOD6YBL054W YEL1P34225 687 aa7.47□□□□□ -1.21
TOD6YBL054W SLM4P38247 162 aa7.47□□□□□ -1.21
TOD6YBL054W UBP9P39967 754 aa7.47□□□□□ -1.21
TOD6YBL054W MAM33P40513 266 aa7.47□□□□□ -1.21
TOD6YBL054W YGR111WP53265 400 aa7.47□□□□□ -1.21
TOD6YBL054W DCP2P53550 970 aaKnown RBP7.47□□□□□ -1.21
TOD6YBL054W RSM24Q03976 319 aa7.47□□□□□ -1.21
TOD6YBL054W UFO1Q04511 668 aa7.47□□□□□ -1.21
TOD6YBL054W NFI1Q12216 726 aa7.47□□□□□ -1.21
TOD6YBL054W CHS2P14180 963 aa7.46□□□□□ -1.21
TOD6YBL054W RPL8AP17076 256 aaKnown RBP7.46□□□□□ -1.21
TOD6YBL054W SFL1P20134 766 aa7.46□□□□□ -1.21
TOD6YBL054W DBP5P20449 482 aaKnown RBP7.46□□□□□ -1.21
TOD6YBL054W MCM5P29496 775 aaKnown RBP7.46□□□□□ -1.21
TOD6YBL054W DBP7P36120 742 aaKnown RBP7.46□□□□□ -1.21
TOD6YBL054W TGL4P36165 910 aa7.46□□□□□ -1.21
TOD6YBL054W DUG2P38149 878 aa7.46□□□□□ -1.21
TOD6YBL054W DIA4P38705 446 aaPredicted RBP7.46□□□□□ -1.21
TOD6YBL054W ETP1P38748 585 aaKnown RBP7.46□□□□□ -1.21
TOD6YBL054W RLP7P40693 322 aaKnown RBP7.46□□□□□ -1.21
TOD6YBL054W JJJ2P46997 583 aa7.46□□□□□ -1.21
TOD6YBL054W RSM26P47141 266 aa7.46□□□□□ -1.21
TOD6YBL054W YGL108CP53139 140 aa7.46□□□□□ -1.21
TOD6YBL054W SNX3Q08826 162 aaKnown RBP7.46□□□□□ -1.21
TOD6YBL054W KEL3Q08979 651 aaPredicted RBP7.46□□□□□ -1.21
TOD6YBL054W DBP10Q12389 995 aaKnown RBP7.46□□□□□ -1.21
TOD6YBL054W SPE4Q12455 300 aa7.46□□□□□ -1.21
TOD6YBL054W PCK1P10963 549 aa7.46□□□□□ -1.22
TOD6YBL054W PMS1P14242 873 aa7.46□□□□□ -1.22
TOD6YBL054W VMA2P16140 517 aaKnown RBP7.46□□□□□ -1.22
TOD6YBL054W CNA1P23287 553 aa7.46□□□□□ -1.22
TOD6YBL054W PEX2P32800 271 aa7.46□□□□□ -1.22
TOD6YBL054W TSC10P38342 320 aa7.46□□□□□ -1.22
TOD6YBL054W FRT2P39734 528 aa7.46□□□□□ -1.22
TOD6YBL054W YTA12P40341 825 aa7.46□□□□□ -1.22
TOD6YBL054W ASG1P40467 964 aa7.46□□□□□ -1.22
TOD6YBL054W DOT5P40553 215 aa7.46□□□□□ -1.22
TOD6YBL054W LAM5P43560 674 aa7.46□□□□□ -1.22
TOD6YBL054W RFX1P48743 811 aa7.46□□□□□ -1.22
TOD6YBL054W PAN2P53010 1115 aaPredicted RBP7.46□□□□□ -1.22
TOD6YBL054W TIM11P81449 96 aaPredicted RBP7.46□□□□□ -1.22
TOD6YBL054W ULP1Q02724 621 aa7.46□□□□□ -1.22
TOD6YBL054W SPO71Q03868 1245 aa7.46□□□□□ -1.22
TOD6YBL054W SYF1Q04048 859 aaPredicted RBP7.46□□□□□ -1.22
TOD6YBL054W YPR202WQ08993 238 aa7.46□□□□□ -1.22
TOD6YBL054W PSF3Q12146 194 aa7.46□□□□□ -1.22
TOD6YBL054W HKR1P41809 1802 aa7.45□□□□□ -1.22
TOD6YBL054W FLO11P08640 1367 aa7.45□□□□□ -1.22
TOD6YBL054W ATR1P13090 542 aa7.45□□□□□ -1.22
TOD6YBL054W MEF1P25039 761 aa7.45□□□□□ -1.22
TOD6YBL054W ICL1P28240 557 aaPredicted RBP7.45□□□□□ -1.22
TOD6YBL054W RAD14P28519 371 aa7.45□□□□□ -1.22
TOD6YBL054W CHS3P29465 1165 aa7.45□□□□□ -1.22
TOD6YBL054W SMF2P38778 549 aa7.45□□□□□ -1.22
TOD6YBL054W PCF11P39081 626 aaPredicted RBP7.45□□□□□ -1.22
TOD6YBL054W STL1P39932 569 aa7.45□□□□□ -1.22
TOD6YBL054W IRR1P40541 1150 aa7.45□□□□□ -1.22
TOD6YBL054W LCB2P40970 561 aa7.45□□□□□ -1.22
TOD6YBL054W STB2P46679 850 aa7.45□□□□□ -1.22
TOD6YBL054W NMA2P53204 395 aa7.45□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms