RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 TMA10Q06177 86 aa10.07□□□□□ -0.8
NME1NME1 ISA1Q07821 250 aaPredicted RBP10.07□□□□□ -0.8
NME1NME1 TOP1P04786 769 aa10.06□□□□□ -0.8
NME1NME1 LST4P34239 828 aa10.06□□□□□ -0.8
NME1NME1 EXG2P52911 562 aa10.06□□□□□ -0.8
NME1NME1 ENB1Q08299 606 aa10.06□□□□□ -0.8
NME1NME1 RPS17AP02407 136 aaKnown RBP10.05□□□□□ -0.8
NME1NME1 GLN4P13188 809 aaKnown RBP10.05□□□□□ -0.8
NME1NME1 RPS17BP14127 136 aaKnown RBP10.05□□□□□ -0.8
NME1NME1 VID28P40547 921 aa10.05□□□□□ -0.8
NME1NME1 PRE10P21242 288 aaKnown RBP RIP-Chip data10.04□□□□□ -0.8not detected
NME1NME1 STE11P23561 717 aa10.04□□□□□ -0.8
NME1NME1 TRZ1P36159 838 aaPredicted RBP10.04□□□□□ -0.8
NME1NME1 DUN1P39009 513 aa10.04□□□□□ -0.8
NME1NME1 MET14Q02196 202 aa10.04□□□□□ -0.8
NME1NME1 GAD1Q04792 585 aa10.04□□□□□ -0.8
NME1NME1 ECM38Q05902 660 aaPredicted RBP10.04□□□□□ -0.8
NME1NME1 VHS3Q08438 674 aa10.04□□□□□ -0.8
NME1NME1 YHR112CP38716 378 aa10.03□□□□□ -0.8
NME1NME1 COX18P53239 316 aa10.03□□□□□ -0.8
NME1NME1 SGO1Q08490 590 aa10.03□□□□□ -0.8
NME1NME1 YLR358CO13565 187 aa10.02□□□□□ -0.81
NME1NME1 HOL1P53389 586 aa10.02□□□□□ -0.81
NME1NME1 PET127P32606 800 aa10.01□□□□□ -0.81
NME1NME1 YKL133CP36066 463 aa10.01□□□□□ -0.81
NME1NME1 FKH2P41813 862 aa10.01□□□□□ -0.81
NME1NME1 PIP2P52960 996 aa10.01□□□□□ -0.81
NME1NME1 TAN1P53072 289 aaPredicted RBP10.01□□□□□ -0.81
NME1NME1 MRPS35P53292 345 aa10.01□□□□□ -0.81
NME1NME1 RGA2Q06407 1009 aa10.01□□□□□ -0.81
NME1NME1 TGL5Q12043 749 aa10.01□□□□□ -0.81
NME1NME1 ATP12P22135 325 aa10□□□□□ -0.81
NME1NME1 IES1P43579 692 aa10□□□□□ -0.81
NME1NME1 ENP2P48234 707 aaKnown RBP10□□□□□ -0.81
NME1NME1 MCM6P53091 1017 aaKnown RBP10□□□□□ -0.81
NME1NME1 YPS7Q06325 596 aa10□□□□□ -0.81
NME1NME1 KCC4P25389 1037 aa9.99□□□□□ -0.81
NME1NME1 MNN10P50108 393 aaKnown RBP9.99□□□□□ -0.81
NME1NME1 TEX1P53851 422 aaKnown RBP9.99□□□□□ -0.81
NME1NME1 HMO1Q03973 246 aaKnown RBP9.99□□□□□ -0.81
NME1NME1 GAL1P04385 528 aa9.98□□□□□ -0.81
NME1NME1 CDC26P14724 124 aa9.98□□□□□ -0.81
NME1NME1 FRS1P15624 595 aaKnown RBP9.98□□□□□ -0.81
NME1NME1 RNQ1P25367 405 aa9.98□□□□□ -0.81
NME1NME1 PTP2P29461 750 aa9.98□□□□□ -0.81
NME1NME1 DGR2P32330 852 aa9.98□□□□□ -0.81
NME1NME1 RSC8P43609 557 aaKnown RBP9.98□□□□□ -0.81
NME1NME1 VMS1Q04311 632 aaKnown RBP9.98□□□□□ -0.81
NME1NME1 MLC2Q06580 163 aa9.98□□□□□ -0.81
NME1NME1 NGL1Q08213 363 aaKnown RBP9.98□□□□□ -0.81
NME1NME1 RNR1P21524 888 aaKnown RBP9.97□□□□□ -0.81
NME1NME1 SRP68P38687 599 aaKnown RBP9.97□□□□□ -0.81
NME1NME1 CTK1Q03957 528 aaKnown RBP9.97□□□□□ -0.81
NME1NME1 ATG11Q12527 1178 aa9.97□□□□□ -0.81
NME1NME1 ERG20P08524 352 aaKnown RBP9.96□□□□□ -0.82
NME1NME1 PFK1P16861 987 aaKnown RBP9.96□□□□□ -0.82
NME1NME1 HXT4P32467 576 aa9.96□□□□□ -0.82
NME1NME1 RIM4P38741 713 aa9.96□□□□□ -0.82
NME1NME1 AVT1P47082 602 aa9.96□□□□□ -0.82
NME1NME1 ERG5P54781 538 aa9.96□□□□□ -0.82
NME1NME1 ELM1P32801 640 aa9.95□□□□□ -0.82
NME1NME1 YNL195CP40168 261 aa9.95□□□□□ -0.82
NME1NME1 CNM67P53865 581 aaKnown RBP9.95□□□□□ -0.82
NME1NME1 VBA4Q04602 768 aaKnown RBP9.95□□□□□ -0.82
NME1NME1 STP4Q07351 490 aa9.95□□□□□ -0.82
NME1NME1 CWC2Q12046 339 aaPredicted RBP9.95□□□□□ -0.82
NME1NME1 LAS17Q12446 633 aa9.95□□□□□ -0.82
NME1NME1 TRP4P07285 380 aaPredicted RBP9.94□□□□□ -0.82
NME1NME1 MET3P08536 511 aa9.94□□□□□ -0.82
NME1NME1 ACO1P19414 778 aaKnown RBP RIP-Chip data9.94□□□□□ -0.82not detected
NME1NME1 PWP2P25635 923 aaKnown RBP9.94□□□□□ -0.82
NME1NME1 PMC1P38929 1173 aaPredicted RBP9.94□□□□□ -0.82
NME1NME1 AMA1P50082 593 aa9.94□□□□□ -0.82
NME1NME1 UBX4P54730 416 aa9.94□□□□□ -0.82
NME1NME1 PPN1Q04119 674 aa9.94□□□□□ -0.82
NME1NME1 VPS36Q06696 566 aa9.94□□□□□ -0.82
NME1NME1 RRP6Q12149 733 aaKnown RBP9.94□□□□□ -0.82
NME1NME1 MF(ALPHA)2P32435 120 aa9.93□□□□□ -0.82
NME1NME1 THI80P35202 319 aa9.93□□□□□ -0.82
NME1NME1 VPS24P36095 224 aaKnown RBP9.93□□□□□ -0.82
NME1NME1 YIR042CP40586 236 aa9.93□□□□□ -0.82
NME1NME1 PXA1P41909 870 aa9.93□□□□□ -0.82
NME1NME1 RCR2Q03446 210 aaKnown RBP9.93□□□□□ -0.82
NME1NME1 NSE5Q03718 556 aa9.93□□□□□ -0.82
NME1NME1 DLT1Q04216 342 aa9.93□□□□□ -0.82
NME1NME1 DIA2Q08496 732 aaPredicted RBP9.93□□□□□ -0.82
NME1NME1 LAT1P12695 482 aaKnown RBP9.92□□□□□ -0.82
NME1NME1 DCG1P32460 244 aa9.92□□□□□ -0.82
NME1NME1 OMS1Q06668 471 aa9.92□□□□□ -0.82
NME1NME1 ECM3Q99252 613 aa9.92□□□□□ -0.82
NME1NME1 HRP1Q99383 534 aaKnown RBP9.92□□□□□ -0.82
NME1NME1 IME1P21190 360 aa9.91□□□□□ -0.82
NME1NME1 PRP22P24384 1145 aaKnown RBP9.91□□□□□ -0.82
NME1NME1 ERG6P25087 383 aaKnown RBP9.91□□□□□ -0.82
NME1NME1 MPT5P39016 859 aaKnown RBP RIP-Chip data9.91□□□□□ -0.82not detected
NME1NME1 IRC5P43610 853 aa9.91□□□□□ -0.82
NME1NME1 NOP9P47077 666 aaKnown RBP9.91□□□□□ -0.82
NME1NME1 TAF4P50105 388 aa9.91□□□□□ -0.82
NME1NME1 CAF20P12962 161 aaKnown RBP9.9□□□□□ -0.82
NME1NME1 BIT61P47041 543 aa9.9□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms