RNA–Protein interactions for RNA: ENST00000573319.1

BCAR4-204, Transcript of breast cancer anti-estrogen resistance 4, humanhuman

TSL 5 BASIC

Gene BCAR4, Length 1,273 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR4-204ENST00000573319 TGIF2Q9GZN2 237 aa7.93□□□□□ -1.14
BCAR4-204ENST00000573319 DNAJB12Q9NXW2 375 aaKnown RBP7.93□□□□□ -1.14
BCAR4-204ENST00000573319 TMA7Q9Y2S6 64 aaKnown RBP7.93□□□□□ -1.14
BCAR4-204ENST00000573319 TREHO43280 583 aa7.92□□□□□ -1.14
BCAR4-204ENST00000573319 NDUFB5O43674 189 aa7.92□□□□□ -1.14
BCAR4-204ENST00000573319 LILRB5O75023 590 aa7.92□□□□□ -1.14
BCAR4-204ENST00000573319 MICAL2O94851 1124 aa7.92□□□□□ -1.14
BCAR4-204ENST00000573319 ARSDP51689 593 aa7.92□□□□□ -1.14
BCAR4-204ENST00000573319 FKBP5Q13451 457 aaPredicted RBP7.92□□□□□ -1.14
BCAR4-204ENST00000573319 COL9A3Q14050 684 aaPredicted RBP7.92□□□□□ -1.14
BCAR4-204ENST00000573319 C11orf91Q3C1V1 193 aa7.92□□□□□ -1.14
BCAR4-204ENST00000573319 C9orf131Q5VYM1 1079 aa7.92□□□□□ -1.14
BCAR4-204ENST00000573319 TMC7Q7Z402 723 aa7.92□□□□□ -1.14
BCAR4-204ENST00000573319 METTL16Q86W50 562 aaKnown RBP7.92□□□□□ -1.14
BCAR4-204ENST00000573319 NT5DC4Q86YG4 428 aa7.92□□□□□ -1.14
BCAR4-204ENST00000573319 TMEM87AQ8NBN3 555 aa7.92□□□□□ -1.14
BCAR4-204ENST00000573319 TINF2Q9BSI4 451 aa7.92□□□□□ -1.14
BCAR4-204ENST00000573319 JPH1Q9HDC5 661 aaPredicted RBP7.92□□□□□ -1.14
BCAR4-204ENST00000573319 PRDM6Q9NQX0 595 aa7.92□□□□□ -1.14
BCAR4-204ENST00000573319 BRPF3Q9ULD4 1205 aa7.92□□□□□ -1.14
BCAR4-204ENST00000573319 VPS8Q8N3P4 1428 aa7.92□□□□□ -1.14
BCAR4-204ENST00000573319 TARBP1Q13395 1621 aaKnown RBP7.92□□□□□ -1.14
BCAR4-204ENST00000573319 K7ELQ4 463 aaPredicted RBP7.91□□□□□ -1.14
BCAR4-204ENST00000573319 PRPF40AO75400 957 aaKnown RBP7.91□□□□□ -1.14
BCAR4-204ENST00000573319 NID1P14543 1247 aa7.91□□□□□ -1.14
BCAR4-204ENST00000573319 ATP2B1P20020 1258 aa7.91□□□□□ -1.14
BCAR4-204ENST00000573319 C20orf204Q6ZNR8 217 aa7.91□□□□□ -1.14
BCAR4-204ENST00000573319 RNF34Q969K3 372 aa7.91□□□□□ -1.14
BCAR4-204ENST00000573319 MYO19Q96H55 970 aa7.91□□□□□ -1.14
BCAR4-204ENST00000573319 LNPKQ9C0E8 428 aa7.91□□□□□ -1.14
BCAR4-204ENST00000573319 EFCC1Q9HA90 598 aa7.91□□□□□ -1.14
BCAR4-204ENST00000573319 MRS2Q9HD23 443 aa7.91□□□□□ -1.14
BCAR4-204ENST00000573319 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.91□□□□□ -1.14
BCAR4-204ENST00000573319 PRKAG2Q9UGJ0 569 aa7.91□□□□□ -1.14
BCAR4-204ENST00000573319 LRFN2Q9ULH4 789 aa7.91□□□□□ -1.14
BCAR4-204ENST00000573319 USP20Q9Y2K6 914 aa7.91□□□□□ -1.14
BCAR4-204ENST00000573319 THOC2Q8NI27 1593 aaKnown RBP7.91□□□□□ -1.14
BCAR4-204ENST00000573319 WDR97A6NE52 1622 aa7.91□□□□□ -1.14
BCAR4-204ENST00000573319 CUL7Q14999 1698 aa7.91□□□□□ -1.14
BCAR4-204ENST00000573319 ABCA5Q8WWZ7 1642 aa7.9□□□□□ -1.14
BCAR4-204ENST00000573319 TRIM28Q13263 835 aaKnown RBP7.9□□□□□ -1.14
BCAR4-204ENST00000573319 GNL2Q13823 731 aaKnown RBP7.9□□□□□ -1.14
BCAR4-204ENST00000573319 TRAPPC3LQ5T215 181 aa7.9□□□□□ -1.14
BCAR4-204ENST00000573319 PSAPL1Q6NUJ1 521 aa7.9□□□□□ -1.14
BCAR4-204ENST00000573319 TMC4Q7Z404 712 aa7.9□□□□□ -1.14
BCAR4-204ENST00000573319 IFT43Q96FT9 208 aa7.9□□□□□ -1.14
BCAR4-204ENST00000573319 MKNK1Q9BUB5 465 aa7.9□□□□□ -1.14
BCAR4-204ENST00000573319 CCSER2Q9H7U1 834 aa7.9□□□□□ -1.14
BCAR4-204ENST00000573319 NAGPAQ9UK23 515 aa7.9□□□□□ -1.14
BCAR4-204ENST00000573319 AQRO60306 1485 aaKnown RBP eCLIP7.89□□□□□ -1.15
BCAR4-204ENST00000573319 SORBS3O60504 671 aa7.89□□□□□ -1.15
BCAR4-204ENST00000573319 APBA3O96018 575 aa7.89□□□□□ -1.15
BCAR4-204ENST00000573319 TARSP26639 723 aaKnown RBP7.89□□□□□ -1.15
BCAR4-204ENST00000573319 MTMR3Q13615 1198 aa7.89□□□□□ -1.15
BCAR4-204ENST00000573319 DOC2BQ14184 412 aa7.89□□□□□ -1.15
BCAR4-204ENST00000573319 DMRTB1Q96MA1 342 aa7.89□□□□□ -1.15
BCAR4-204ENST00000573319 GMLQ99445 158 aa7.89□□□□□ -1.15
BCAR4-204ENST00000573319 ZFATQ9P243 1243 aa7.89□□□□□ -1.15
BCAR4-204ENST00000573319 GRIN2BQ13224 1484 aa7.88□□□□□ -1.15
BCAR4-204ENST00000573319 FHAD1B1AJZ9 1412 aa7.88□□□□□ -1.15
BCAR4-204ENST00000573319 TLDC2A0PJX2 215 aa7.88□□□□□ -1.15
BCAR4-204ENST00000573319 SASH3O75995 380 aa7.88□□□□□ -1.15
BCAR4-204ENST00000573319 LDHBP07195 334 aaKnown RBP7.88□□□□□ -1.15
BCAR4-204ENST00000573319 RARAP10276 462 aa7.88□□□□□ -1.15
BCAR4-204ENST00000573319 CPB1P15086 417 aa7.88□□□□□ -1.15
BCAR4-204ENST00000573319 GATA4P43694 442 aa7.88□□□□□ -1.15
BCAR4-204ENST00000573319 FANCCQ00597 558 aa7.88□□□□□ -1.15
BCAR4-204ENST00000573319 MLLT1Q03111 559 aaPredicted RBP7.88□□□□□ -1.15
BCAR4-204ENST00000573319 DSC3Q14574 896 aa7.88□□□□□ -1.15
BCAR4-204ENST00000573319 GRIK4Q16099 956 aa7.88□□□□□ -1.15
BCAR4-204ENST00000573319 COX20Q5RI15 118 aa7.88□□□□□ -1.15
BCAR4-204ENST00000573319 FAM35AQ86V20 835 aa7.88□□□□□ -1.15
BCAR4-204ENST00000573319 TREML1Q86YW5 311 aa7.88□□□□□ -1.15
BCAR4-204ENST00000573319 DNAJC2Q99543 621 aaKnown RBP7.88□□□□□ -1.15
BCAR4-204ENST00000573319 PARP2Q9UGN5 583 aa7.88□□□□□ -1.15
BCAR4-204ENST00000573319 ARHGAP35Q9NRY4 1499 aa7.87□□□□□ -1.15
BCAR4-204ENST00000573319 OPLAHO14841 1288 aa7.87□□□□□ -1.15
BCAR4-204ENST00000573319 RGS9O75916 674 aaPredicted RBP7.87□□□□□ -1.15
BCAR4-204ENST00000573319 DAB2P98082 770 aa7.87□□□□□ -1.15
BCAR4-204ENST00000573319 PLCB3Q01970 1234 aa7.87□□□□□ -1.15
BCAR4-204ENST00000573319 SOGA3Q5TF21 947 aa7.87□□□□□ -1.15
BCAR4-204ENST00000573319 DHX32Q7L7V1 743 aaKnown RBP7.87□□□□□ -1.15
BCAR4-204ENST00000573319 CMTR1Q8N1G2 835 aaKnown RBP7.87□□□□□ -1.15
BCAR4-204ENST00000573319 CWC22Q9HCG8 908 aaKnown RBP7.87□□□□□ -1.15
BCAR4-204ENST00000573319 RTCBQ9Y3I0 505 aaKnown RBP7.87□□□□□ -1.15
BCAR4-204ENST00000573319 ARAP1Q96P48 1450 aa7.87□□□□□ -1.15
BCAR4-204ENST00000573319 ZNF76P36508 570 aa7.86□□□□□ -1.15
BCAR4-204ENST00000573319 AFF1P51825 1210 aaKnown RBP7.86□□□□□ -1.15
BCAR4-204ENST00000573319 POLR3GLQ9BT43 218 aa7.86□□□□□ -1.15
BCAR4-204ENST00000573319 SAP130Q9H0E3 1048 aa7.86□□□□□ -1.15
BCAR4-204ENST00000573319 CAPN10Q9HC96 672 aa7.86□□□□□ -1.15
BCAR4-204ENST00000573319 ZNF608Q9ULD9 1512 aaPredicted RBP7.85□□□□□ -1.15
BCAR4-204ENST00000573319 MAP3K6O95382 1288 aa7.85□□□□□ -1.15
BCAR4-204ENST00000573319 ATP2B2Q01814 1243 aa7.85□□□□□ -1.15
BCAR4-204ENST00000573319 NAA30Q147X3 362 aaPredicted RBP7.85□□□□□ -1.15
BCAR4-204ENST00000573319 ALKBH2Q6NS38 261 aa7.85□□□□□ -1.15
BCAR4-204ENST00000573319 C16orf46Q6P387 395 aa7.85□□□□□ -1.15
BCAR4-204ENST00000573319 CAPN12Q6ZSI9 719 aa7.85□□□□□ -1.15
BCAR4-204ENST00000573319 DUSP9Q99956 384 aaKnown RBP7.85□□□□□ -1.15
BCAR4-204ENST00000573319 RIMBP3CA6NJZ7 1639 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms