RNA–Protein interactions for RNA: ENST00000511822.1

CDH9-204, Transcript of cadherin 9, humanhuman

TSL 4

Gene CDH9, Length 532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-204ENST00000511822 SKIP12755 728 aa9.51□□□□□ -0.89
CDH9-204ENST00000511822 FOXR1Q6PIV2 292 aa9.51□□□□□ -0.89
CDH9-204ENST00000511822 GTPBP3Q969Y2 492 aaKnown RBP9.51□□□□□ -0.89
CDH9-204ENST00000511822 NUDT16Q96DE0 195 aaKnown RBP9.51□□□□□ -0.89
CDH9-204ENST00000511822 SYT17Q9BSW7 474 aa9.51□□□□□ -0.89
CDH9-204ENST00000511822 MTFR1LQ9H019 292 aa9.51□□□□□ -0.89
CDH9-204ENST00000511822 TRAK1Q9UPV9 953 aa9.51□□□□□ -0.89
CDH9-204ENST00000511822 BRD4O60885 1362 aaPredicted RBP9.5□□□□□ -0.89
CDH9-204ENST00000511822 EML3Q32P44 896 aa9.5□□□□□ -0.89
CDH9-204ENST00000511822 PPARGC1BQ86YN6 1023 aaKnown RBP9.5□□□□□ -0.89
CDH9-204ENST00000511822 ADAMTS19Q8TE59 1207 aa9.5□□□□□ -0.89
CDH9-204ENST00000511822 RHBDD1Q8TEB9 315 aa9.5□□□□□ -0.89
CDH9-204ENST00000511822 WHAMMQ8TF30 809 aa9.5□□□□□ -0.89
CDH9-204ENST00000511822 PDGFDQ9GZP0 370 aaPredicted RBP9.5□□□□□ -0.89
CDH9-204ENST00000511822 NUCKS1Q9H1E3 243 aaKnown RBP9.5□□□□□ -0.89
CDH9-204ENST00000511822 THBS1P07996 1170 aa9.49□□□□□ -0.89
CDH9-204ENST00000511822 SRSF11Q05519 484 aaKnown RBP9.49□□□□□ -0.89
CDH9-204ENST00000511822 GPAMQ9HCL2 828 aa9.49□□□□□ -0.89
CDH9-204ENST00000511822 PCDHGA11Q9Y5H2 935 aa9.49□□□□□ -0.89
CDH9-204ENST00000511822 SLIT3O75094 1523 aa9.48□□□□□ -0.89
CDH9-204ENST00000511822 TMEM229AB2RXF0 380 aa9.48□□□□□ -0.89
CDH9-204ENST00000511822 LZTS3O60299 673 aaPredicted RBP9.48□□□□□ -0.89
CDH9-204ENST00000511822 GCP02774 474 aa9.48□□□□□ -0.89
CDH9-204ENST00000511822 SLC15A2Q16348 729 aa9.48□□□□□ -0.89
CDH9-204ENST00000511822 DDB1Q16531 1140 aa9.48□□□□□ -0.89
CDH9-204ENST00000511822 NUTM2GQ5VZR2 741 aa9.48□□□□□ -0.89
CDH9-204ENST00000511822 SVOPQ8N4V2 548 aa9.48□□□□□ -0.89
CDH9-204ENST00000511822 MBIPQ9NS73 344 aa9.48□□□□□ -0.89
CDH9-204ENST00000511822 STK32BQ9NY57 414 aa9.48□□□□□ -0.89
CDH9-204ENST00000511822 ACEP12821 1306 aa9.48□□□□□ -0.89
CDH9-204ENST00000511822 ARHGEF28Q8N1W1 1705 aaKnown RBP9.48□□□□□ -0.89
CDH9-204ENST00000511822 SMTNP53814 917 aa9.47□□□□□ -0.89
CDH9-204ENST00000511822 NCOA4Q13772 614 aa9.47□□□□□ -0.89
CDH9-204ENST00000511822 NLRP13Q86W25 1043 aa9.47□□□□□ -0.89
CDH9-204ENST00000511822 ABTB2Q8N961 1025 aa9.47□□□□□ -0.89
CDH9-204ENST00000511822 TRERF1Q96PN7 1200 aa9.47□□□□□ -0.89
CDH9-204ENST00000511822 NOD1Q9Y239 953 aa9.47□□□□□ -0.89
CDH9-204ENST00000511822 SBF2Q86WG5 1849 aa9.47□□□□□ -0.89
CDH9-204ENST00000511822 PAPPAQ13219 1627 aa9.46□□□□□ -0.89
CDH9-204ENST00000511822 USP17L5A8MUK1 530 aa9.46□□□□□ -0.9
CDH9-204ENST00000511822 MSX1P28360 303 aa9.46□□□□□ -0.9
CDH9-204ENST00000511822 TXNRD1Q16881 649 aa9.46□□□□□ -0.9
CDH9-204ENST00000511822 PTF1AQ7RTS3 328 aa9.46□□□□□ -0.9
CDH9-204ENST00000511822 SLC4A9Q96Q91 983 aa9.46□□□□□ -0.9
CDH9-204ENST00000511822 SERTAD1Q9UHV2 236 aa9.46□□□□□ -0.9
CDH9-204ENST00000511822 CHD4Q14839 1912 aa9.46□□□□□ -0.9
CDH9-204ENST00000511822 ARHGEF15O94989 841 aa9.45□□□□□ -0.9
CDH9-204ENST00000511822 PLA2G4AP47712 749 aa9.45□□□□□ -0.9
CDH9-204ENST00000511822 GTF2IP78347 998 aa9.45□□□□□ -0.9
CDH9-204ENST00000511822 MARCH10Q8NA82 808 aaPredicted RBP9.45□□□□□ -0.9
CDH9-204ENST00000511822 CLUAP1Q96AJ1 413 aa9.45□□□□□ -0.9
CDH9-204ENST00000511822 UCN2Q96RP3 112 aa9.45□□□□□ -0.9
CDH9-204ENST00000511822 CDK19Q9BWU1 502 aa9.45□□□□□ -0.9
CDH9-204ENST00000511822 ADAMTS8Q9UP79 889 aa9.45□□□□□ -0.9
CDH9-204ENST00000511822 WDR17Q8IZU2 1322 aa9.45□□□□□ -0.9
CDH9-204ENST00000511822 TNS2Q63HR2 1409 aa9.45□□□□□ -0.9
CDH9-204ENST00000511822 WNK3Q9BYP7 1800 aa9.45□□□□□ -0.9
CDH9-204ENST00000511822 LBRQ14739 615 aaKnown RBP9.44□□□□□ -0.9
CDH9-204ENST00000511822 MTFR1Q15390 333 aa9.44□□□□□ -0.9
CDH9-204ENST00000511822 HDGFL1Q5TGJ6 251 aa9.44□□□□□ -0.9
CDH9-204ENST00000511822 LYPD4Q6UWN0 246 aa9.44□□□□□ -0.9
CDH9-204ENST00000511822 ZNF295-AS1Q8N0V1 137 aa9.44□□□□□ -0.9
CDH9-204ENST00000511822 DEPDC4Q8N2C3 294 aa9.44□□□□□ -0.9
CDH9-204ENST00000511822 RUBCNLQ9H714 662 aa9.44□□□□□ -0.9
CDH9-204ENST00000511822 SHANK3Q9BYB0 1731 aa9.43□□□□□ -0.9
CDH9-204ENST00000511822 ABCC6O95255 1503 aa9.43□□□□□ -0.9
CDH9-204ENST00000511822 USP6P35125 1406 aa9.43□□□□□ -0.9
CDH9-204ENST00000511822 CPSF1Q10570 1443 aaKnown RBP9.43□□□□□ -0.9
CDH9-204ENST00000511822 CSB-PGBD3P0DP91 1061 aa9.43□□□□□ -0.9
CDH9-204ENST00000511822 UBAP2LQ14157 1087 aaKnown RBP9.43□□□□□ -0.9
CDH9-204ENST00000511822 TOM1L2Q6ZVM7 507 aa9.43□□□□□ -0.9
CDH9-204ENST00000511822 PLEKHM2Q8IWE5 1019 aa9.43□□□□□ -0.9
CDH9-204ENST00000511822 PGBD3Q8N328 593 aa9.43□□□□□ -0.9
CDH9-204ENST00000511822 NIFKQ9BYG3 293 aaKnown RBP9.43□□□□□ -0.9
CDH9-204ENST00000511822 IQSEC3Q9UPP2 1182 aaPredicted RBP9.43□□□□□ -0.9
CDH9-204ENST00000511822 CEP350Q5VT06 3117 aa9.43□□□□□ -0.9
CDH9-204ENST00000511822 TRPM1Q7Z4N2 1603 aa9.42□□□□□ -0.9
CDH9-204ENST00000511822 PPIP5K1Q6PFW1 1433 aa9.42□□□□□ -0.9
CDH9-204ENST00000511822 A6NJY4 79 aa9.42□□□□□ -0.9
CDH9-204ENST00000511822 CDK2AP1O14519 115 aa9.42□□□□□ -0.9
CDH9-204ENST00000511822 TBC1D9Q6ZT07 1266 aa9.42□□□□□ -0.9
CDH9-204ENST00000511822 CARD10Q9BWT7 1032 aa9.42□□□□□ -0.9
CDH9-204ENST00000511822 CFHR5Q9BXR6 569 aa9.42□□□□□ -0.9
CDH9-204ENST00000511822 COL18A1P39060 1754 aa9.42□□□□□ -0.9
CDH9-204ENST00000511822 NHSQ6T4R5 1651 aa9.42□□□□□ -0.9
CDH9-204ENST00000511822 CCDC7Q96M83 1385 aa9.41□□□□□ -0.9
CDH9-204ENST00000511822 USP17L3A6NCW0 530 aa9.41□□□□□ -0.9
CDH9-204ENST00000511822 USP17L4A6NCW7 530 aa9.41□□□□□ -0.9
CDH9-204ENST00000511822 CELA2BP08218 269 aaPredicted RBP9.41□□□□□ -0.9
CDH9-204ENST00000511822 MX2P20592 715 aa9.41□□□□□ -0.9
CDH9-204ENST00000511822 ATP4AP20648 1035 aa9.41□□□□□ -0.9
CDH9-204ENST00000511822 GPR162Q16538 588 aa9.41□□□□□ -0.9
CDH9-204ENST00000511822 USP17L2Q6R6M4 530 aa9.41□□□□□ -0.9
CDH9-204ENST00000511822 ERICH6Q7L0X2 663 aa9.41□□□□□ -0.9
CDH9-204ENST00000511822 USP17L1Q7RTZ2 530 aa9.41□□□□□ -0.9
CDH9-204ENST00000511822 CRISPLD1Q9H336 500 aa9.41□□□□□ -0.9
CDH9-204ENST00000511822 USP3Q9Y6I4 520 aa9.41□□□□□ -0.9
CDH9-204ENST00000511822 AKAP12Q02952 1782 aa9.4□□□□□ -0.9
CDH9-204ENST00000511822 BACH1O14867 736 aa9.4□□□□□ -0.9
CDH9-204ENST00000511822 ATP9BO43861 1147 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms