RNA–Protein interactions for RNA: ENST00000473007.7

UBE2D4-210, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-210ENST00000473007 SEPT9Q9UHD8 586 aaPredicted RBP5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 THRAP3Q9Y2W1 955 aaKnown RBP5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 DHX57Q6P158 1386 aaKnown RBP5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 PIK3C2GO75747 1445 aa5.37□□□□□ -1.55
UBE2D4-210ENST00000473007 A0A1W2PRU2 124 aa5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 EIF1AYO14602 144 aaKnown RBP5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 OPLAHO14841 1288 aa5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 USP5P45974 858 aa5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 SETQ01105 290 aaPredicted RBP5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 ORC1Q13415 861 aa5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 FAM26DQ5JW98 314 aa5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 MEI1Q5TIA1 1274 aa5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 LILRB2Q8N423 598 aa5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 NKX2-3Q8TAU0 364 aa5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 ZBED2Q9BTP6 218 aa5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 COPRSQ9NQ92 184 aa5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 LAS1LQ9Y4W2 734 aaKnown RBP5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 EID1Q9Y6B2 187 aa5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 TECPR2O15040 1411 aa5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 XIRP1Q702N8 1843 aaKnown RBP5.36□□□□□ -1.55
UBE2D4-210ENST00000473007 TRPM1Q7Z4N2 1603 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 DLC1Q96QB1 1528 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 NPHP4O75161 1426 aaPredicted RBP5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 PTCH1Q13635 1447 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 RIMS2Q9UQ26 1411 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 ESYT3A0FGR9 886 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 NASPP49321 788 aaPredicted RBP5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 EPHA4P54764 986 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 UBE4AQ14139 1066 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 FAM98CQ17RN3 349 aaKnown RBP5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 MAP9Q49MG5 647 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 ZFYVE27Q5T4F4 411 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 HOMER1Q86YM7 354 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 TRPM4Q8TD43 1214 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 TRIM52Q96A61 297 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 THAP11Q96EK4 314 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 CEP89Q96ST8 783 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 TSPAN10Q9H1Z9 355 aaPredicted RBP5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 ZSWIM6Q9HCJ5 1215 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 HOMER2Q9NSB8 354 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 CNTN3Q9P232 1028 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 PNMA2Q9UL42 364 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 LRFN2Q9ULH4 789 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 MRVI1Q9Y6F6 885 aa5.35□□□□□ -1.55
UBE2D4-210ENST00000473007 STRCP1A6NGW2 1772 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 ALKQ9UM73 1620 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 DCCP43146 1447 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 A0A0U1RQG5 324 aaPredicted RBP5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 BACH1O14867 736 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 GIPC1O14908 333 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 NR1I2O75469 434 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 VIL1P09327 827 aaKnown RBP5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 HCLS1P14317 486 aaPredicted RBP5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 ST13P50502 369 aaKnown RBP5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 DOK7Q18PE1 504 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 LONRF3Q496Y0 759 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 CCSAPQ6IQ19 270 aaPredicted RBP5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 SH3RF1Q7Z6J0 888 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 C11orf96Q7Z7L8 435 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 PGBD3Q8N328 593 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 HNRNPLLQ8WVV9 542 aaKnown RBP5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 RELTQ969Z4 430 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 NUDT12Q9BQG2 462 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 SPON2Q9BUD6 331 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 CARD14Q9BXL6 1004 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 OSBPL7Q9BZF2 842 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 DNAJC25Q9H1X3 360 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 TCEAL9Q9UHQ7 104 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 RABGEF1Q9UJ41 708 aa5.34□□□□□ -1.55
UBE2D4-210ENST00000473007 ADGRB2O60241 1585 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 ADAMTS13Q76LX8 1427 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 ERBB3P21860 1342 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 MAGEB6P1A0A0J9YX57 407 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 PPP1R12BO60237 982 aaPredicted RBP5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 GABBR2O75899 941 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 MYCP01106 439 aaPredicted RBP5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 PDGFAP04085 211 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 HOXB3P14651 431 aaPredicted RBP5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 EVA1CP58658 441 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 DNM1Q05193 864 aaKnown RBP5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 ERFEQ4G0M1 354 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 SCUBE3Q8IX30 993 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 RAVER1Q8IY67 606 aaKnown RBP5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 SEPT12Q8IYM1 358 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 STAG2Q8N3U4 1231 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 EDEM1Q92611 657 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 MYO19Q96H55 970 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 KCNK17Q96T54 332 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 DNAJC7Q99615 494 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 C2orf49Q9BVC5 232 aaPredicted RBP5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 CCDC113Q9H0I3 377 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 QTRT2Q9H974 415 aaKnown RBP5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 STRIP2Q9ULQ0 834 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 EFR3BQ9Y2G0 817 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 ARHGEF28Q8N1W1 1705 aaKnown RBP5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 ADGRB1O14514 1584 aa5.33□□□□□ -1.56
UBE2D4-210ENST00000473007 FAM135BQ49AJ0 1406 aa5.32□□□□□ -1.56
UBE2D4-210ENST00000473007 GPRASP1Q5JY77 1395 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms