RNA–Protein interactions for RNA: ENST00000473007.7

UBE2D4-210, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-210ENST00000473007 CHIC1Q5VXU3 224 aa11.37□□□□□ -0.59
UBE2D4-210ENST00000473007 AEBP2Q6ZN18 517 aaPredicted RBP10.89□□□□□ -0.67
UBE2D4-210ENST00000473007 PHF23Q9BUL5 403 aaPredicted RBP10.12□□□□□ -0.79
UBE2D4-210ENST00000473007 EHMT2Q96KQ7 1210 aa9.59□□□□□ -0.87
UBE2D4-210ENST00000473007 PLPPR3Q6T4P5 718 aa9.56□□□□□ -0.88
UBE2D4-210ENST00000473007 SLC24A1O60721 1099 aa9.33□□□□□ -0.92
UBE2D4-210ENST00000473007 KCNA4P22459 653 aa9.25□□□□□ -0.93
UBE2D4-210ENST00000473007 SENP3Q9H4L4 574 aaPredicted RBP9.25□□□□□ -0.93
UBE2D4-210ENST00000473007 CSRNP3Q8WYN3 585 aa9.15□□□□□ -0.94
UBE2D4-210ENST00000473007 ADRA2BP18089 450 aa8.97□□□□□ -0.97
UBE2D4-210ENST00000473007 SLC4A1APQ9BWU0 796 aaKnown RBP8.93□□□□□ -0.98
UBE2D4-210ENST00000473007 NISCHQ9Y2I1 1504 aa8.92□□□□□ -0.98
UBE2D4-210ENST00000473007 RTN4Q9NQC3 1192 aaKnown RBP8.88□□□□□ -0.99
UBE2D4-210ENST00000473007 AMER1Q5JTC6 1135 aaPredicted RBP8.83□□□□□ -1
UBE2D4-210ENST00000473007 PPP6R1Q9UPN7 881 aa8.68□□□□□ -1.02
UBE2D4-210ENST00000473007 ZBTB22O15209 634 aa8.55□□□□□ -1.04
UBE2D4-210ENST00000473007 PPP4R3CPQ6ZMV5 832 aa8.54□□□□□ -1.04
UBE2D4-210ENST00000473007 NCBP3Q53F19 620 aaKnown RBP8.51□□□□□ -1.05
UBE2D4-210ENST00000473007 NPM3O75607 178 aaKnown RBP8.43□□□□□ -1.06
UBE2D4-210ENST00000473007 FOXD1Q16676 465 aa8.34□□□□□ -1.07
UBE2D4-210ENST00000473007 FOXD4L1Q9NU39 408 aa8.27□□□□□ -1.09
UBE2D4-210ENST00000473007 FKBP8Q14318 412 aa8.19□□□□□ -1.1
UBE2D4-210ENST00000473007 PRKCSHP14314 528 aaPredicted RBP8.18□□□□□ -1.1
UBE2D4-210ENST00000473007 PLCB2Q00722 1185 aa8.11□□□□□ -1.11
UBE2D4-210ENST00000473007 CNKSR2Q8WXI2 1034 aa8.11□□□□□ -1.11
UBE2D4-210ENST00000473007 BCANQ96GW7 911 aa8.09□□□□□ -1.11
UBE2D4-210ENST00000473007 TAOK2Q9UL54 1235 aa8.08□□□□□ -1.12
UBE2D4-210ENST00000473007 DNAJC5BQ9UF47 199 aa8.07□□□□□ -1.12
UBE2D4-210ENST00000473007 CCDC180Q9P1Z9 1646 aa8.06□□□□□ -1.12
UBE2D4-210ENST00000473007 PIAS4Q8N2W9 510 aaPredicted RBP8.02□□□□□ -1.13
UBE2D4-210ENST00000473007 DAXXQ9UER7 740 aaPredicted RBP8□□□□□ -1.13
UBE2D4-210ENST00000473007 HAP1P54257 671 aaPredicted RBP7.99□□□□□ -1.13
UBE2D4-210ENST00000473007 TPRNQ4KMQ1 711 aa7.93□□□□□ -1.14
UBE2D4-210ENST00000473007 ATXN8OSP0DMR3 200 aa7.91□□□□□ -1.14
UBE2D4-210ENST00000473007 VSIG10Q8N0Z9 540 aa7.91□□□□□ -1.14
UBE2D4-210ENST00000473007 SCAF1Q9H7N4 1312 aaKnown RBP7.89□□□□□ -1.15
UBE2D4-210ENST00000473007 MSH5O43196 834 aa7.89□□□□□ -1.15
UBE2D4-210ENST00000473007 ARXQ96QS3 562 aa7.86□□□□□ -1.15
UBE2D4-210ENST00000473007 TIMELESSQ9UNS1 1208 aa7.85□□□□□ -1.15
UBE2D4-210ENST00000473007 SLC4A2P04920 1241 aa7.79□□□□□ -1.16
UBE2D4-210ENST00000473007 TULP1O00294 542 aaPredicted RBP7.78□□□□□ -1.16
UBE2D4-210ENST00000473007 RNF216Q9NWF9 866 aaPredicted RBP7.76□□□□□ -1.17
UBE2D4-210ENST00000473007 KDM2AQ9Y2K7 1162 aa7.75□□□□□ -1.17
UBE2D4-210ENST00000473007 MYCNP04198 464 aaPredicted RBP7.74□□□□□ -1.17
UBE2D4-210ENST00000473007 DCAF8L2P0C7V8 631 aa7.72□□□□□ -1.17
UBE2D4-210ENST00000473007 GTF3C3Q9Y5Q9 886 aa7.69□□□□□ -1.18
UBE2D4-210ENST00000473007 FBLN2P98095 1184 aa7.68□□□□□ -1.18
UBE2D4-210ENST00000473007 MAPK8IP2Q13387 824 aaPredicted RBP7.67□□□□□ -1.18
UBE2D4-210ENST00000473007 ERICH6Q7L0X2 663 aa7.66□□□□□ -1.18
UBE2D4-210ENST00000473007 FBXO3Q9UK99 471 aa7.65□□□□□ -1.18
UBE2D4-210ENST00000473007 HOMEZQ8IX15 550 aa7.64□□□□□ -1.19
UBE2D4-210ENST00000473007 ABCC9O60706 1549 aa7.62□□□□□ -1.19
UBE2D4-210ENST00000473007 MYO15BQ96JP2 1530 aa7.59□□□□□ -1.19
UBE2D4-210ENST00000473007 PKD2Q13563 968 aa7.59□□□□□ -1.19
UBE2D4-210ENST00000473007 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.59□□□□□ -1.19
UBE2D4-210ENST00000473007 BBXQ8WY36 941 aaPredicted RBP7.58□□□□□ -1.2
UBE2D4-210ENST00000473007 PAXIP1Q6ZW49 1069 aaPredicted RBP7.56□□□□□ -1.2
UBE2D4-210ENST00000473007 DCAF1Q9Y4B6 1507 aa7.54□□□□□ -1.2
UBE2D4-210ENST00000473007 VASPP50552 380 aaPredicted RBP7.54□□□□□ -1.2
UBE2D4-210ENST00000473007 HOXD11P31277 338 aaPredicted RBP7.53□□□□□ -1.2
UBE2D4-210ENST00000473007 TMEM132AQ24JP5 1023 aa7.53□□□□□ -1.2
UBE2D4-210ENST00000473007 IFNLR1Q8IU57 520 aaPredicted RBP7.53□□□□□ -1.2
UBE2D4-210ENST00000473007 CFAP44Q96MT7 982 aa7.53□□□□□ -1.2
UBE2D4-210ENST00000473007 ATF5Q9Y2D1 282 aaPredicted RBP7.53□□□□□ -1.2
UBE2D4-210ENST00000473007 NPM1P06748 294 aaKnown RBP eCLIP7.51□□□□□ -1.21
UBE2D4-210ENST00000473007 DNAJC5Q9H3Z4 198 aa7.51□□□□□ -1.21
UBE2D4-210ENST00000473007 NACADO15069 1562 aa7.5□□□□□ -1.21
UBE2D4-210ENST00000473007 TSHZ2Q9NRE2 1034 aa7.49□□□□□ -1.21
UBE2D4-210ENST00000473007 NBR1Q14596 966 aa7.47□□□□□ -1.21
UBE2D4-210ENST00000473007 ZCCHC6Q5VYS8 1495 aaKnown RBP7.47□□□□□ -1.21
UBE2D4-210ENST00000473007 C14orf37Q86TY3 774 aa7.45□□□□□ -1.22
UBE2D4-210ENST00000473007 RB1CC1Q8TDY2 1594 aa7.45□□□□□ -1.22
UBE2D4-210ENST00000473007 PROM2Q8N271 834 aa7.44□□□□□ -1.22
UBE2D4-210ENST00000473007 SPRYD3Q8NCJ5 442 aa7.44□□□□□ -1.22
UBE2D4-210ENST00000473007 SPDYE4A6NLX3 237 aa7.42□□□□□ -1.22
UBE2D4-210ENST00000473007 RANGAP1P46060 587 aaPredicted RBP7.37□□□□□ -1.23
UBE2D4-210ENST00000473007 DMRT2Q9Y5R5 561 aa7.37□□□□□ -1.23
UBE2D4-210ENST00000473007 ECM2O94769 699 aaPredicted RBP7.36□□□□□ -1.23
UBE2D4-210ENST00000473007 PODXL2Q9NZ53 605 aa7.34□□□□□ -1.23
UBE2D4-210ENST00000473007 SHROOM4Q9ULL8 1493 aa7.31□□□□□ -1.24
UBE2D4-210ENST00000473007 SAMD1Q6SPF0 538 aaPredicted RBP7.31□□□□□ -1.24
UBE2D4-210ENST00000473007 UNC13AQ9UPW8 1703 aa7.31□□□□□ -1.24
UBE2D4-210ENST00000473007 RGL2O15211 777 aa7.29□□□□□ -1.24
UBE2D4-210ENST00000473007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.28□□□□□ -1.24
UBE2D4-210ENST00000473007 HNRNPUL2Q1KMD3 747 aaKnown RBP7.28□□□□□ -1.24
UBE2D4-210ENST00000473007 SPOCK2Q92563 424 aa7.28□□□□□ -1.24
UBE2D4-210ENST00000473007 ZNF219Q9P2Y4 722 aaPredicted RBP7.28□□□□□ -1.24
UBE2D4-210ENST00000473007 SUPT5HO00267 1087 aaKnown RBP7.26□□□□□ -1.25
UBE2D4-210ENST00000473007 MKRN4PQ13434 485 aaPredicted RBP7.24□□□□□ -1.25
UBE2D4-210ENST00000473007 CHGAP10645 457 aaKnown RBP7.23□□□□□ -1.25
UBE2D4-210ENST00000473007 KLHL34Q8N239 644 aa7.23□□□□□ -1.25
UBE2D4-210ENST00000473007 BICRAQ9NZM4 1560 aa7.17□□□□□ -1.26
UBE2D4-210ENST00000473007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.16□□□□□ -1.26
UBE2D4-210ENST00000473007 U3KPZ7 1027 aaPredicted RBP7.15□□□□□ -1.26
UBE2D4-210ENST00000473007 TRIM26Q12899 539 aaPredicted RBP7.14□□□□□ -1.27
UBE2D4-210ENST00000473007 NPM2Q86SE8 214 aaKnown RBP7.14□□□□□ -1.27
UBE2D4-210ENST00000473007 UBTFP17480 764 aaKnown RBP7.13□□□□□ -1.27
UBE2D4-210ENST00000473007 BRPF1P55201 1214 aaPredicted RBP7.11□□□□□ -1.27
UBE2D4-210ENST00000473007 HS6ST3Q8IZP7 471 aa7.11□□□□□ -1.27
UBE2D4-210ENST00000473007 SCRIBQ14160 1630 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms