RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.02□□□□□ -1.61
HERC4-204ENST00000395198 CUX2O14529 1486 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 AGR2O95994 175 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 NUCB1Q02818 461 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 IL31Q6EBC2 164 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 VPS52Q8N1B4 723 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 PPHLN1Q8NEY8 458 aaKnown RBP5.01□□□□□ -1.61
HERC4-204ENST00000395198 NACC2Q96BF6 587 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 PCDHGB3Q9Y5G1 929 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 IKBKGQ9Y6K9 419 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 BRD4O60885 1362 aaPredicted RBP5.01□□□□□ -1.61
HERC4-204ENST00000395198 GNPATO15228 680 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 ST13P50502 369 aaKnown RBP5.01□□□□□ -1.61
HERC4-204ENST00000395198 CLDN10P78369 228 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 PPP2R5CQ13362 524 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 ZNF211Q13398 564 aaPredicted RBP5.01□□□□□ -1.61
HERC4-204ENST00000395198 ELOAQ14241 798 aaKnown RBP5.01□□□□□ -1.61
HERC4-204ENST00000395198 PKN1Q16512 942 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 ALFQ53S48 1182 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 B4GALNT3Q6L9W6 998 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 CCDC129Q6ZRS4 1044 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 MAGED1Q9Y5V3 778 aaPredicted RBP5.01□□□□□ -1.61
HERC4-204ENST00000395198 NEK3P51956 506 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 PIP4K2BP78356 416 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 ROR1Q01973 937 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 PTPN14Q15678 1187 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 CCDC158Q5M9N0 1113 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 EFCC1Q9HA90 598 aa5.01□□□□□ -1.61
HERC4-204ENST00000395198 RAB27AP51159 221 aa5□□□□□ -1.61
HERC4-204ENST00000395198 IRGCQ6NXR0 463 aa5□□□□□ -1.61
HERC4-204ENST00000395198 MTHFD1LQ6UB35 978 aa5□□□□□ -1.61
HERC4-204ENST00000395198 KIAA0907Q7Z7F0 614 aaPredicted RBP5□□□□□ -1.61
HERC4-204ENST00000395198 C17orf50Q8WW18 174 aa5□□□□□ -1.61
HERC4-204ENST00000395198 MRFAP1L1Q96HT8 127 aa5□□□□□ -1.61
HERC4-204ENST00000395198 KCNH8Q96L42 1107 aa5□□□□□ -1.61
HERC4-204ENST00000395198 YIPF2Q9BWQ6 316 aa5□□□□□ -1.61
HERC4-204ENST00000395198 TEX13AQ9BXU3 409 aaPredicted RBP5□□□□□ -1.61
HERC4-204ENST00000395198 KLRG2A4D1S0 409 aaPredicted RBP5□□□□□ -1.61
HERC4-204ENST00000395198 SMTNL1A8MU46 457 aa5□□□□□ -1.61
HERC4-204ENST00000395198 MAPK1P28482 360 aa5□□□□□ -1.61
HERC4-204ENST00000395198 ARID5AQ03989 594 aa5□□□□□ -1.61
HERC4-204ENST00000395198 TRIM29Q14134 588 aa5□□□□□ -1.61
HERC4-204ENST00000395198 GALNT17Q6IS24 598 aa5□□□□□ -1.61
HERC4-204ENST00000395198 MMTAG2Q9BU76 263 aaKnown RBP5□□□□□ -1.61
HERC4-204ENST00000395198 TBC1D7Q9P0N9 293 aa5□□□□□ -1.61
HERC4-204ENST00000395198 CCDC196A0A1B0GTZ2 297 aa5□□□□□ -1.61
HERC4-204ENST00000395198 KIF3CO14782 793 aa5□□□□□ -1.61
HERC4-204ENST00000395198 SGTAO43765 313 aa5□□□□□ -1.61
HERC4-204ENST00000395198 RAC2P15153 192 aa5□□□□□ -1.61
HERC4-204ENST00000395198 DNAJB2P25686 324 aa5□□□□□ -1.61
HERC4-204ENST00000395198 MORC3Q14149 939 aa5□□□□□ -1.61
HERC4-204ENST00000395198 ARHGAP27Q6ZUM4 889 aa5□□□□□ -1.61
HERC4-204ENST00000395198 TRIM74Q86UV6 250 aa5□□□□□ -1.61
HERC4-204ENST00000395198 TRIM73Q86UV7 250 aa5□□□□□ -1.61
HERC4-204ENST00000395198 ATXN2LQ8WWM7 1075 aaKnown RBP5□□□□□ -1.61
HERC4-204ENST00000395198 RRAGDQ9NQL2 400 aaPredicted RBP5□□□□□ -1.61
HERC4-204ENST00000395198 GPHNQ9NQX3 736 aaPredicted RBP5□□□□□ -1.61
HERC4-204ENST00000395198 SPG7Q9UQ90 795 aa5□□□□□ -1.61
HERC4-204ENST00000395198 ESYT3A0FGR9 886 aa5□□□□□ -1.61
HERC4-204ENST00000395198 ANKRD18BA2A2Z9 1011 aa5□□□□□ -1.61
HERC4-204ENST00000395198 FAM25EA8MYX2 175 aa5□□□□□ -1.61
HERC4-204ENST00000395198 HALP42357 657 aa5□□□□□ -1.61
HERC4-204ENST00000395198 NBPF8Q3BBV2 869 aa5□□□□□ -1.61
HERC4-204ENST00000395198 GPATCH4Q5T3I0 446 aaKnown RBP5□□□□□ -1.61
HERC4-204ENST00000395198 PPP2R2DQ66LE6 453 aa5□□□□□ -1.61
HERC4-204ENST00000395198 SLC4A10Q6U841 1118 aa5□□□□□ -1.61
HERC4-204ENST00000395198 C1orf122Q6ZSJ8 110 aa5□□□□□ -1.61
HERC4-204ENST00000395198 ARL10Q8N8L6 244 aa5□□□□□ -1.61
HERC4-204ENST00000395198 ANKRD42Q8N9B4 389 aa5□□□□□ -1.61
HERC4-204ENST00000395198 CECR2Q9BXF3 1484 aa5□□□□□ -1.61
HERC4-204ENST00000395198 ZMAT5Q9UDW3 170 aaKnown RBP5□□□□□ -1.61
HERC4-204ENST00000395198 NOVA2Q9UNW9 492 aaKnown RBP5□□□□□ -1.61
HERC4-204ENST00000395198 BAZ1AQ9NRL2 1556 aaPredicted RBP4.99□□□□□ -1.61
HERC4-204ENST00000395198 TOR1BO14657 336 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 PPFIA2O75334 1257 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 ATF3P18847 181 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 CLK2P49760 499 aaKnown RBP4.99□□□□□ -1.61
HERC4-204ENST00000395198 ARHGAP4P98171 946 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 MYBPC3Q14896 1274 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 NLRP13Q86W25 1043 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 ASIC4Q96FT7 647 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 GTPBP4Q9BZE4 634 aaKnown RBP4.99□□□□□ -1.61
HERC4-204ENST00000395198 RBSNQ9H1K0 784 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 EPB41L4AQ9HCS5 686 aaPredicted RBP4.99□□□□□ -1.61
HERC4-204ENST00000395198 PPP1R9AQ9ULJ8 1098 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 CEP131Q9UPN4 1083 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 RASA4BC9J798 803 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 STXBP3O00186 592 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 NR1I2O75469 434 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 EAPPQ56P03 285 aaPredicted RBP4.99□□□□□ -1.61
HERC4-204ENST00000395198 THEMISQ8N1K5 641 aaPredicted RBP4.99□□□□□ -1.61
HERC4-204ENST00000395198 RNF34Q969K3 372 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 EIF2AK1Q9BQI3 630 aaKnown RBP4.99□□□□□ -1.61
HERC4-204ENST00000395198 MED4Q9NPJ6 270 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 DDX49Q9Y6V7 483 aaKnown RBP4.99□□□□□ -1.61
HERC4-204ENST00000395198 GOLGA6L3A6NEY3 463 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 CCDC159P0C7I6 412 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 IDEP14735 1019 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 KCNA6P17658 529 aa4.99□□□□□ -1.61
HERC4-204ENST00000395198 INF2Q27J81 1249 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms