RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 RNF187Q5TA31 235 aaPredicted RBP12.22□□□□□ -0.45
TRERF1-203ENST00000372917 B4GALNT2Q8NHY0 566 aa12.22□□□□□ -0.45
TRERF1-203ENST00000372917 LARP6Q9BRS8 491 aaKnown RBP12.22□□□□□ -0.45
TRERF1-203ENST00000372917 KLC4Q9NSK0 619 aa12.22□□□□□ -0.45
TRERF1-203ENST00000372917 ERVK-7P63135 1459 aa12.21□□□□□ -0.45
TRERF1-203ENST00000372917 ABCC11Q96J66 1382 aa12.21□□□□□ -0.45
TRERF1-203ENST00000372917 STX6O43752 255 aa12.21□□□□□ -0.45
TRERF1-203ENST00000372917 NEFHP12036 1026 aa12.21□□□□□ -0.45
TRERF1-203ENST00000372917 CDC25BP30305 580 aa12.21□□□□□ -0.45
TRERF1-203ENST00000372917 CUL4AQ13619 759 aa12.21□□□□□ -0.45
TRERF1-203ENST00000372917 BRD3Q15059 726 aa12.21□□□□□ -0.45
TRERF1-203ENST00000372917 RSRC1Q96IZ7 334 aaKnown RBP12.21□□□□□ -0.45
TRERF1-203ENST00000372917 RNF40O75150 1001 aa12.21□□□□□ -0.45
TRERF1-203ENST00000372917 MAGEA8P43361 318 aa12.21□□□□□ -0.45
TRERF1-203ENST00000372917 GSDMDP57764 484 aa12.21□□□□□ -0.45
TRERF1-203ENST00000372917 LMBR1Q8WVP7 490 aa12.21□□□□□ -0.45
TRERF1-203ENST00000372917 AATKQ6ZMQ8 1374 aa12.21□□□□□ -0.46
TRERF1-203ENST00000372917 FCHSD2O94868 740 aa12.21□□□□□ -0.46
TRERF1-203ENST00000372917 DBN1Q16643 649 aa12.21□□□□□ -0.46
TRERF1-203ENST00000372917 VPS53Q5VIR6 699 aa12.21□□□□□ -0.46
TRERF1-203ENST00000372917 RABGGTAQ92696 567 aa12.21□□□□□ -0.46
TRERF1-203ENST00000372917 EZH1Q92800 747 aaPredicted RBP12.21□□□□□ -0.46
TRERF1-203ENST00000372917 CAVIN2O95810 425 aa12.2□□□□□ -0.46
TRERF1-203ENST00000372917 F13A1P00488 732 aa12.2□□□□□ -0.46
TRERF1-203ENST00000372917 DDX20Q9UHI6 824 aaKnown RBP12.2□□□□□ -0.46
TRERF1-203ENST00000372917 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRERF1-203ENST00000372917 UHRF1BP1LA0JNW5 1464 aa12.2□□□□□ -0.46
TRERF1-203ENST00000372917 TTC41PQ6P2S7 1318 aa12.2□□□□□ -0.46
TRERF1-203ENST00000372917 ADGRF5Q8IZF2 1346 aa12.2□□□□□ -0.46
TRERF1-203ENST00000372917 TXLNAP40222 546 aa12.2□□□□□ -0.46
TRERF1-203ENST00000372917 C16orf71Q8IYS4 520 aaPredicted RBP12.2□□□□□ -0.46
TRERF1-203ENST00000372917 IRX2Q9BZI1 471 aaPredicted RBP12.2□□□□□ -0.46
TRERF1-203ENST00000372917 TSGA10Q9BZW7 698 aa12.2□□□□□ -0.46
TRERF1-203ENST00000372917 GNAI3P08754 354 aa12.2□□□□□ -0.46
TRERF1-203ENST00000372917 ALDH1L2Q3SY69 923 aa12.2□□□□□ -0.46
TRERF1-203ENST00000372917 IL16Q14005 1332 aa12.2□□□□□ -0.46
TRERF1-203ENST00000372917 PHLPP2Q6ZVD8 1323 aa12.2□□□□□ -0.46
TRERF1-203ENST00000372917 GNG11P61952 73 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 TTC22Q5TAA0 569 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 TMC6Q7Z403 805 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 KIAA0825Q8IV33 1275 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 ARHGEF1Q92888 912 aaKnown RBP12.19□□□□□ -0.46
TRERF1-203ENST00000372917 THUMPD2Q9BTF0 503 aaKnown RBP12.19□□□□□ -0.46
TRERF1-203ENST00000372917 BLOC1S6Q9UL45 172 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 CAPRIN2Q6IMN6 1127 aaKnown RBP12.19□□□□□ -0.46
TRERF1-203ENST00000372917 ABCB6Q9NP58 842 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 PCDHGA4Q9Y5G9 962 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 PSDA5PKW4 1024 aaPredicted RBP12.19□□□□□ -0.46
TRERF1-203ENST00000372917 HMMRO75330 724 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 TUBB4AP04350 444 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 SYT1P21579 422 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 NCAPG2Q86XI2 1143 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 PLEKHM2Q8IWE5 1019 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 ATL2Q8NHH9 583 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 RILPL2Q969X0 211 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 TSPYL2Q9H2G4 693 aaPredicted RBP12.19□□□□□ -0.46
TRERF1-203ENST00000372917 PUF60Q9UHX1 559 aaKnown RBP12.19□□□□□ -0.46
TRERF1-203ENST00000372917 TPCN1Q9ULQ1 816 aa12.19□□□□□ -0.46
TRERF1-203ENST00000372917 SDSP20132 328 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 PARP3Q9Y6F1 533 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 RBM47A0AV96 593 aaKnown RBP12.18□□□□□ -0.46
TRERF1-203ENST00000372917 PDHBP11177 359 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 CASP8Q14790 479 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 SNCBQ16143 134 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 SPATA21Q7Z572 469 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 BICD2Q8TD16 824 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 CCDC114Q96M63 670 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 TSPAN18Q96SJ8 248 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 YIPF2Q9BWQ6 316 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 RPAP1Q9BWH6 1393 aaPredicted RBP12.18□□□□□ -0.46
TRERF1-203ENST00000372917 RHOXF2BP0C7M4 288 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 TRIM42Q8IWZ5 723 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 RHOXF2Q9BQY4 288 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 ZCWPW1Q9H0M4 648 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.18□□□□□ -0.46
TRERF1-203ENST00000372917 RPGRIP1LQ68CZ1 1315 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 NSD2O96028 1365 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 TRPM2O94759 1503 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 BEND6Q5SZJ8 279 aaPredicted RBP12.18□□□□□ -0.46
TRERF1-203ENST00000372917 WLSQ5T9L3 541 aa12.18□□□□□ -0.46
TRERF1-203ENST00000372917 RRP12Q5JTH9 1297 aaKnown RBP12.17□□□□□ -0.46
TRERF1-203ENST00000372917 AKNAD1Q5T1N1 836 aa12.17□□□□□ -0.46
TRERF1-203ENST00000372917 BICD1Q96G01 975 aa12.17□□□□□ -0.46
TRERF1-203ENST00000372917 EHD4Q9H223 541 aa12.17□□□□□ -0.46
TRERF1-203ENST00000372917 CDC42BPBQ9Y5S2 1711 aa12.17□□□□□ -0.46
TRERF1-203ENST00000372917 SBNO2Q9Y2G9 1366 aa12.17□□□□□ -0.46
TRERF1-203ENST00000372917 GOLGA6CA6NDK9 693 aa12.17□□□□□ -0.46
TRERF1-203ENST00000372917 GOLGA6BA6NDN3 693 aa12.17□□□□□ -0.46
TRERF1-203ENST00000372917 GOLGA6DP0CG33 693 aa12.17□□□□□ -0.46
TRERF1-203ENST00000372917 PRKAR2BP31323 418 aa12.17□□□□□ -0.46
TRERF1-203ENST00000372917 CEBPZQ03701 1054 aaKnown RBP12.17□□□□□ -0.46
TRERF1-203ENST00000372917 ANO2Q9NQ90 1003 aa12.17□□□□□ -0.46
TRERF1-203ENST00000372917 GOLGA6AQ9NYA3 693 aa12.17□□□□□ -0.46
TRERF1-203ENST00000372917 PTPRTO14522 1441 aa12.17□□□□□ -0.46
TRERF1-203ENST00000372917 MEX3CQ5U5Q3 659 aaKnown RBP12.17□□□□□ -0.46
TRERF1-203ENST00000372917 FERMT3Q86UX7 667 aa12.17□□□□□ -0.46
TRERF1-203ENST00000372917 FMNL1O95466 1100 aaPredicted RBP12.16□□□□□ -0.46
TRERF1-203ENST00000372917 CCDC40Q4G0X9 1142 aa12.16□□□□□ -0.46
TRERF1-203ENST00000372917 SLC30A9Q6PML9 568 aa12.16□□□□□ -0.46
TRERF1-203ENST00000372917 NECTIN2Q92692 538 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms