RNA–Protein interactions for RNA: ENSMUST00000221654.1

Rnf220-212, Transcript of E3 ubiquitin-protein ligase Rnf220, mousemouse

TSL 1 (best) BASIC

Gene Rnf220, Length 1,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220-212ENSMUST00000221654 Afg3l2Q8JZQ2 802 aaKnown RBP29.55■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Gimap8Q75N62 688 aa29.55■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Ncaph2Q8BSP2 607 aa29.55■■■□□ 2.32
Rnf220-212ENSMUST00000221654 BrapQ99MP8 591 aa29.55■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Kif4P33174 1231 aa29.54■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Shisa4Q8CA71 197 aa29.54■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Scn11aQ9R053 1765 aa29.54■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Me3Q8BMF3 604 aa29.53■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Stox1B2RQL2 990 aa29.53■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Sema6bO54951 886 aa29.53■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Atp1b3P97370 278 aa29.53■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Alx1Q8C8B0 326 aa29.53■■■□□ 2.32
Rnf220-212ENSMUST00000221654 ImmtQ8CAQ8 757 aaKnown RBP29.53■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Cntnap1O54991 1385 aa29.52■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Cyp2d34L7N463 504 aa29.52■■■□□ 2.32
Rnf220-212ENSMUST00000221654 MypopQ8R4U1 393 aa29.52■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Ube4aE9Q735 1028 aa29.51■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Cyp2d9P11714 504 aa29.51■■■□□ 2.32
Rnf220-212ENSMUST00000221654 GabrdP22933 449 aa29.51■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Spty2d1Q68FG3 682 aa29.51■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Tmem143Q8VD26 458 aa29.51■■■□□ 2.32
Rnf220-212ENSMUST00000221654 Pald1P70261 859 aa29.51■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Smarcc2Q6PDG5 1213 aa29.51■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Pcdhb9E9Q5G2 828 aa29.5■■■□□ 2.31
Rnf220-212ENSMUST00000221654 CltaO08585 235 aa29.5■■■□□ 2.31
Rnf220-212ENSMUST00000221654 VeztQ3ZK22 780 aa29.5■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Iffo2Q8R2V2 512 aa29.5■■■□□ 2.31
Rnf220-212ENSMUST00000221654 ZwintQ9CQU5 252 aa29.5■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Mroh6V9GX81 722 aa29.5■■■□□ 2.31
Rnf220-212ENSMUST00000221654 CoblQ5NBX1 1337 aaKnown RBP29.5■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Duox1A2AQ92 1551 aa29.5■■■□□ 2.31
Rnf220-212ENSMUST00000221654 1700029H14RikE9PY36 240 aa29.49■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Ppfibp2O35711 882 aa29.49■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Ube2hP62257 183 aa29.49■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Ccdc66Q6NS45 935 aa29.49■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Slc39a11Q8BWY7 342 aa29.49■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Ccdc178Q8CDV0 866 aa29.49■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Sf3b3Q921M3 1217 aaKnown RBP29.49■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Mad1l1Q9WTX8 717 aaKnown RBP29.49■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Atp8b3Q6UQ17 1335 aa29.49■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Pms1Q8K119 917 aa29.49■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Foxo3Q9WVH4 672 aa29.49■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Syce3B5KM66 88 aa29.48■■■□□ 2.31
Rnf220-212ENSMUST00000221654 ErmnQ5EBJ4 281 aa29.48■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Znf496Q5SXI5 585 aa29.48■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Ufl1Q8CCJ3 793 aaKnown RBP29.48■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Gm29094F6Q785 221 aa29.47■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Limch1Q3UH68 1057 aa29.47■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Hand2Q61039 217 aa29.47■■■□□ 2.31
Rnf220-212ENSMUST00000221654 MthfsQ9D110 203 aa29.47■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Igbp1bQ9QZ29 343 aa29.47■■■□□ 2.31
Rnf220-212ENSMUST00000221654 EappQ5BU09 281 aa29.47■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Lrit1Q8K099 624 aa29.47■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Zcrb1Q9CZ96 217 aaKnown RBP29.47■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Znfx1Q8R151 1909 aaKnown RBP29.46■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Taok3Q8BYC6 898 aa29.46■■■□□ 2.31
Rnf220-212ENSMUST00000221654 HmcesQ8R1M0 353 aaKnown RBP29.46■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Sept12Q9D451 317 aa29.46■■■□□ 2.31
Rnf220-212ENSMUST00000221654 TrdnE9Q9K5 693 aa29.45■■■□□ 2.31
Rnf220-212ENSMUST00000221654 SlkO54988 1233 aa29.45■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Phf14Q9D4H9 881 aa29.45■■■□□ 2.31
Rnf220-212ENSMUST00000221654 Ercc3P49135 783 aa29.45■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Pes1Q9EQ61 584 aaKnown RBP29.45■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Pde4bB1AWC9 736 aa29.44■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Pla2g4fQ50L41 855 aa29.44■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Nap1l3Q794H2 544 aa29.43■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Mast3Q3U214 1321 aa29.43■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Arhgap33Q80YF9 1305 aa29.43■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Q8BT18 775 aa29.43■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Rufy2Q8R4C2 606 aa29.43■■■□□ 2.3
Rnf220-212ENSMUST00000221654 HdlbpQ8VDJ3 1268 aaKnown RBP29.43■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Med4Q9CQA5 270 aa29.43■■■□□ 2.3
Rnf220-212ENSMUST00000221654 FliiQ9JJ28 1271 aa29.42■■■□□ 2.3
Rnf220-212ENSMUST00000221654 PtmaP26350 111 aa29.41■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Cd22P35329 862 aa29.41■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Ano1Q8BHY3 960 aa29.41■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Gja10Q9WUS4 505 aa29.41■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Esyt1Q3U7R1 1092 aaKnown RBP29.41■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Babam1Q3UI43 333 aa29.41■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Ube3cQ80U95 1083 aa29.41■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Pcdhb22Q91XZ8 794 aa29.41■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Trim59Q922Y2 403 aa29.41■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Myh3P13541 1940 aa29.41■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Kcnq3Q8K3F6 873 aa29.4■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Fsd1Q7TPM6 496 aa29.39■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Nxf7Q80SZ6 620 aaKnown RBP29.39■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Cnot6lQ8VEG6 555 aa29.39■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Mrpl44Q9CY73 333 aaKnown RBP29.39■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Frmd7A2AD83 703 aa29.39■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Cct2P80314 535 aaKnown RBP29.39■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Wdr19Q3UGF1 1341 aa29.39■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Pram1Q6BCL1 675 aa29.39■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Nup98Q6PFD9 1816 aaKnown RBP29.39■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Srp68Q8BMA6 625 aaKnown RBP29.39■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Nup88Q8CEC0 753 aaKnown RBP29.39■■■□□ 2.3
Rnf220-212ENSMUST00000221654 Cyp3a59D3Z2W7 503 aa29.38■■■□□ 2.29
Rnf220-212ENSMUST00000221654 Nyap1Q6PFX7 833 aa29.38■■■□□ 2.29
Rnf220-212ENSMUST00000221654 Cep55Q8BT07 462 aa29.38■■■□□ 2.29
Rnf220-212ENSMUST00000221654 Dbndd1Q9CZ00 160 aa29.38■■■□□ 2.29
Rnf220-212ENSMUST00000221654 Zscan22Q8BGS5 496 aa29.37■■■□□ 2.29
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms