RNA–Protein interactions for RNA: ENSMUST00000221654.1

Rnf220-212, Transcript of E3 ubiquitin-protein ligase Rnf220, mousemouse

TSL 1 (best) BASIC

Gene Rnf220, Length 1,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220-212ENSMUST00000221654 NischQ80TM9 1593 aa50.59■■■■■ 5.69
Rnf220-212ENSMUST00000221654 Gm35339A0A140LHH9 1649 aa50.29■■■■■ 5.64
Rnf220-212ENSMUST00000221654 Abcc9P70170 1546 aa49.2■■■■■ 5.47
Rnf220-212ENSMUST00000221654 Abcc8B2RUS7 1588 aa48.3■■■■■ 5.32
Rnf220-212ENSMUST00000221654 Rhox8Q6VSS7 320 aa45.82■■■■■ 4.93
Rnf220-212ENSMUST00000221654 ScribQ80U72 1612 aa45.33■■■■■ 4.85
Rnf220-212ENSMUST00000221654 Dcaf1Q80TR8 1506 aa45.1■■■■■ 4.81
Rnf220-212ENSMUST00000221654 Rtl1Q7M732 1744 aa45.06■■■■■ 4.8
Rnf220-212ENSMUST00000221654 Kdm5dQ62240 1548 aa44.33■■■■■ 4.69
Rnf220-212ENSMUST00000221654 Rb1cc1Q9ESK9 1588 aa44.27■■■■■ 4.68
Rnf220-212ENSMUST00000221654 NacadQ5SWP3 1504 aa44.12■■■■■ 4.65
Rnf220-212ENSMUST00000221654 Ccdc180J3QNE4 1664 aa44.04■■■■■ 4.64
Rnf220-212ENSMUST00000221654 Baz1aO88379 1555 aa43.81■■■■■ 4.6
Rnf220-212ENSMUST00000221654 Zcchc6Q5BLK4 1491 aaKnown RBP43.59■■■■■ 4.57
Rnf220-212ENSMUST00000221654 Crybg2B7ZCC2 1516 aa43.28■■■■■ 4.52
Rnf220-212ENSMUST00000221654 Sycp2Q9CUU3 1500 aa43.18■■■■■ 4.5
Rnf220-212ENSMUST00000221654 Smarca2Q6DIC0 1577 aa42.78■■■■■ 4.44
Rnf220-212ENSMUST00000221654 Ccdc136Q3TVA9 1136 aa42.55■■■■■ 4.4
Rnf220-212ENSMUST00000221654 BicraF8VPZ9 1578 aa42.26■■■■■ 4.36
Rnf220-212ENSMUST00000221654 HrcG5E8J6 738 aa41.98■■■■■ 4.31
Rnf220-212ENSMUST00000221654 Trim41Q5NCC3 630 aa41.95■■■■■ 4.31
Rnf220-212ENSMUST00000221654 Cecr2E9Q2Z1 1453 aa41.77■■■■■ 4.28
Rnf220-212ENSMUST00000221654 Brd4Q9ESU6 1400 aaKnown RBP41.66■■■■■ 4.26
Rnf220-212ENSMUST00000221654 Synj1Q8CHC4 1574 aa41.34■■■■■ 4.21
Rnf220-212ENSMUST00000221654 CftrP26361 1476 aa41.19■■■■■ 4.18
Rnf220-212ENSMUST00000221654 Smarca4Q3TKT4 1613 aaKnown RBP41.16■■■■■ 4.18
Rnf220-212ENSMUST00000221654 Cttnbp2B9EJA2 1648 aa41.06■■■■■ 4.16
Rnf220-212ENSMUST00000221654 Golga3P55937 1487 aa41■■■■■ 4.15
Rnf220-212ENSMUST00000221654 Cep164Q5DU05 1446 aa40.99■■■■■ 4.15
Rnf220-212ENSMUST00000221654 Cngb1E1AZ71 1325 aa40.78■■■■■ 4.12
Rnf220-212ENSMUST00000221654 Top2bQ64511 1612 aa40.69■■■■■ 4.1
Rnf220-212ENSMUST00000221654 Rsf1E9PWW9 1441 aaKnown RBP40.68■■■■■ 4.1
Rnf220-212ENSMUST00000221654 Iqgap2Q3UQ44 1575 aa40.64■■■■■ 4.1
Rnf220-212ENSMUST00000221654 Atad2bE9Q166 1460 aaKnown RBP40.64■■■■■ 4.1
Rnf220-212ENSMUST00000221654 Esf1Q3V1V3 845 aaKnown RBP40.56■■■■■ 4.08
Rnf220-212ENSMUST00000221654 Pds5bQ4VA53 1446 aaKnown RBP40.55■■■■■ 4.08
Rnf220-212ENSMUST00000221654 Ccdc88bQ4QRL3 1481 aa40.51■■■■■ 4.07
Rnf220-212ENSMUST00000221654 Chic1Q8CBW7 227 aa40.49■■■■■ 4.07
Rnf220-212ENSMUST00000221654 Cc2d2aQ8CFW7 1633 aa40.18■■■■■ 4.02
Rnf220-212ENSMUST00000221654 Fmn1Q05860 1466 aa40.08■■■■■ 4.01
Rnf220-212ENSMUST00000221654 Wdr62Q3U3T8 1523 aa39.96■■■■□ 3.99
Rnf220-212ENSMUST00000221654 Rpgrip1Q9EPQ2 1331 aa39.94■■■■□ 3.98
Rnf220-212ENSMUST00000221654 Frmpd1A2AKB4 1549 aa39.93■■■■□ 3.98
Rnf220-212ENSMUST00000221654 Gab3Q8BSM5 595 aa39.85■■■■□ 3.97
Rnf220-212ENSMUST00000221654 Top2aQ01320 1528 aaKnown RBP39.79■■■■□ 3.96
Rnf220-212ENSMUST00000221654 Ehmt2Q9Z148 1263 aaKnown RBP39.77■■■■□ 3.96
Rnf220-212ENSMUST00000221654 Ercc6F8VPZ5 1481 aa39.76■■■■□ 3.95
Rnf220-212ENSMUST00000221654 Acin1Q9JIX8 1338 aaKnown RBP39.73■■■■□ 3.95
Rnf220-212ENSMUST00000221654 TnnQ80Z71 1560 aa39.7■■■■□ 3.95
Rnf220-212ENSMUST00000221654 Rapgef2Q8CHG7 1496 aa39.51■■■■□ 3.92
Rnf220-212ENSMUST00000221654 Lamc3Q9R0B6 1581 aa39.48■■■■□ 3.91
Rnf220-212ENSMUST00000221654 Unc13aQ4KUS2 1712 aa39.48■■■■□ 3.91
Rnf220-212ENSMUST00000221654 Thoc2B1AZI6 1594 aaKnown RBP39.43■■■■□ 3.9
Rnf220-212ENSMUST00000221654 Kif15Q6P9L6 1387 aa39.19■■■■□ 3.86
Rnf220-212ENSMUST00000221654 Phldb1Q6PDH0 1371 aaKnown RBP39.15■■■■□ 3.86
Rnf220-212ENSMUST00000221654 Cep162Q6ZQ06 1403 aa39.14■■■■□ 3.86
Rnf220-212ENSMUST00000221654 Eif4g1Q6NZJ6 1600 aaKnown RBP39.03■■■■□ 3.84
Rnf220-212ENSMUST00000221654 Camsap1A2AHC3 1581 aa39.02■■■■□ 3.84
Rnf220-212ENSMUST00000221654 Fam135aQ6NS59 1506 aa38.97■■■■□ 3.83
Rnf220-212ENSMUST00000221654 NrkQ9R0G8 1455 aa38.85■■■■□ 3.81
Rnf220-212ENSMUST00000221654 Ccdc18Q640L5 1455 aa38.84■■■■□ 3.81
Rnf220-212ENSMUST00000221654 Npm2Q80W85 207 aa38.83■■■■□ 3.81
Rnf220-212ENSMUST00000221654 PtprkP35822 1457 aa38.78■■■■□ 3.8
Rnf220-212ENSMUST00000221654 Shroom4Q1W617 1475 aa38.74■■■■□ 3.79
Rnf220-212ENSMUST00000221654 Grin2bQ01097 1482 aa38.7■■■■□ 3.79
Rnf220-212ENSMUST00000221654 Ubl4bQ9CQ84 188 aa38.69■■■■□ 3.78
Rnf220-212ENSMUST00000221654 Arhgap35Q91YM2 1499 aa38.69■■■■□ 3.78
Rnf220-212ENSMUST00000221654 Il27Q8K3I6 234 aa38.69■■■■□ 3.78
Rnf220-212ENSMUST00000221654 Cux2P70298 1426 aa38.69■■■■□ 3.78
Rnf220-212ENSMUST00000221654 Myt1lP97500 1187 aa38.62■■■■□ 3.77
Rnf220-212ENSMUST00000221654 Map3k1P53349 1493 aa38.53■■■■□ 3.76
Rnf220-212ENSMUST00000221654 Baz1bQ9Z277 1479 aa38.46■■■■□ 3.75
Rnf220-212ENSMUST00000221654 Npm1Q61937 292 aaKnown RBP38.39■■■■□ 3.74
Rnf220-212ENSMUST00000221654 Clip1Q922J3 1391 aa38.35■■■■□ 3.73
Rnf220-212ENSMUST00000221654 LrpprcQ6PB66 1392 aaKnown RBP38.34■■■■□ 3.73
Rnf220-212ENSMUST00000221654 Mroh2bQ7M6Y6 1581 aa38.34■■■■□ 3.73
Rnf220-212ENSMUST00000221654 Efcab5A0JP43 1406 aa38.31■■■■□ 3.72
Rnf220-212ENSMUST00000221654 PogzQ8BZH4 1409 aaKnown RBP38.3■■■■□ 3.72
Rnf220-212ENSMUST00000221654 Mier1Q5UAK0 511 aa38.24■■■■□ 3.71
Rnf220-212ENSMUST00000221654 AqrQ8CFQ3 1481 aaKnown RBP38.2■■■■□ 3.71
Rnf220-212ENSMUST00000221654 Eea1Q8BL66 1411 aa38.18■■■■□ 3.7
Rnf220-212ENSMUST00000221654 Duox2A2AQ99 1517 aa38.18■■■■□ 3.7
Rnf220-212ENSMUST00000221654 Arap1Q4LDD4 1452 aa38.08■■■■□ 3.69
Rnf220-212ENSMUST00000221654 Mrc2Q64449 1479 aa38.07■■■■□ 3.69
Rnf220-212ENSMUST00000221654 UbtfP25976 765 aaKnown RBP38.04■■■■□ 3.68
Rnf220-212ENSMUST00000221654 Zeb1Q64318 1117 aa38.04■■■■□ 3.68
Rnf220-212ENSMUST00000221654 Dhx29Q6PGC1 1365 aaKnown RBP38.03■■■■□ 3.68
Rnf220-212ENSMUST00000221654 NefmP08553 848 aa38■■■■□ 3.67
Rnf220-212ENSMUST00000221654 Arhgef5E9Q7D5 1581 aa37.99■■■■□ 3.67
Rnf220-212ENSMUST00000221654 Setd5Q5XJV7 1441 aa37.99■■■■□ 3.67
Rnf220-212ENSMUST00000221654 Erich3F6QRE9 1637 aa37.98■■■■□ 3.67
Rnf220-212ENSMUST00000221654 Dnajc5bQ9CQ94 199 aa37.96■■■■□ 3.67
Rnf220-212ENSMUST00000221654 Carmil1Q6EDY6 1374 aa37.94■■■■□ 3.66
Rnf220-212ENSMUST00000221654 Ankrd26Q811D2 1581 aa37.94■■■■□ 3.66
Rnf220-212ENSMUST00000221654 Samd9lQ69Z37 1561 aa37.93■■■■□ 3.66
Rnf220-212ENSMUST00000221654 Kif21aQ9QXL2 1672 aa37.91■■■■□ 3.66
Rnf220-212ENSMUST00000221654 Plekhg3Q4VAC9 1341 aa37.88■■■■□ 3.66
Rnf220-212ENSMUST00000221654 SynmQ70IV5 1561 aa37.88■■■■□ 3.65
Rnf220-212ENSMUST00000221654 Crocc2F6XLV1 1638 aa37.86■■■■□ 3.65
Rnf220-212ENSMUST00000221654 Tiam1Q60610 1591 aa37.76■■■■□ 3.64
Retrieved 100 of 22,080 RNA–protein pairs in 97.7 ms