RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Ugt1a5B2RT14 529 aa10.87□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Atp1a3Q6PIC6 1013 aa10.87□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Triml1Q8BVP1 470 aa10.87□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Letm1Q9Z2I0 738 aa10.87□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Dctn1O08788 1281 aa10.87□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Itga6Q61739 1091 aa10.87□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Tmem119Q8R138 280 aa10.87□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Ttc37F8VPK0 1563 aa10.87□□□□□ -0.67
Ldlr-202ENSMUST00000213114 RereQ80TZ9 1558 aa10.87□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Vgll3P85442 326 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Traf3ip1Q149C2 625 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Cep112Q5PR68 954 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Nlrp9aQ66X03 949 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Esco1Q69Z69 843 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Phldb2Q8K1N2 1249 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Cdca7Q9D0M2 382 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 CpvlQ9D3S9 478 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Col1a2Q01149 1372 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 PtpruB1AUH1 1446 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Tbc1d8bA3KGB4 1114 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Zscan25B2RX31 543 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 DbnlQ62418 436 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Ift122Q6NWV3 1182 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Plcd1Q8R3B1 756 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 SdsQ8VBT2 327 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Krt23Q99PS0 422 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Cnpy2Q9QXT0 182 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Api5O35841 504 aaKnown RBP10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Pip4k2aO70172 405 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 ArsiQ32KI9 573 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Zbtb40Q6PCS8 1258 aa10.86□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Pkp1P97350 728 aaKnown RBP10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Gzf1Q4VBD9 706 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Eno4Q8C042 619 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Pm20d1Q8C165 503 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 9230110C19RikQ8CC70 267 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Appbp2Q9DAX9 585 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Cnnm2Q3TWN3 875 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Secisbp2lQ6A098 1086 aaKnown RBP10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Sde2Q8K1J5 448 aaKnown RBP10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Kif2cQ922S8 721 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Ttc5Q99LG4 440 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Uhrf1bp1B2KF50 1429 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 1700006A11RikB9EHI3 544 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 RtcbQ99LF4 505 aaKnown RBP10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Ccdc96Q9CR92 584 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 TrdnE9Q9K5 693 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Slc1a4O35874 532 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Ccdc162pQ0VG85 912 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Hdgfl1Q2VPR5 283 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Uri1Q3TLD5 531 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Sycp1Q62209 993 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Morc2aQ69ZX6 1030 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Cep135Q6P5D4 1140 aa10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Snw1Q9CSN1 536 aaKnown RBP10.85□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Snrpa1P57784 255 aaKnown RBP10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Zkscan4Q5SZT6 480 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Spag5Q7TME2 1165 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Adck5Q80V03 582 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Znf131Q8K3J5 619 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Tbc1d8Q9Z1A9 1134 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Aox1O54754 1333 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Ktn1Q61595 1327 aaKnown RBP10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Ftl2P49945 183 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Vps37dQ810I0 261 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Ncoa5Q91W39 579 aaKnown RBP10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Homer1Q9Z2Y3 366 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Mast3Q3U214 1321 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Cep170bQ80U49 1574 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Nlrp1aQ2LKU9 1182 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Zfp51Q3U4L8 781 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Abcf1Q6P542 837 aaKnown RBP10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 RgmbQ7TQ33 436 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Rufy1Q8BIJ7 712 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Ncaph2Q8BSP2 607 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Abcc4E9Q236 1325 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Itsn2Q9Z0R6 1659 aa10.84□□□□□ -0.67
Ldlr-202ENSMUST00000213114 Myo1bP46735 1107 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Tbc1d5Q80XQ2 815 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Wdr24Q8CFJ9 790 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Dydc2Q9D3X8 139 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Kcnn1Q9EQR3 537 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 AdgbG3UZ78 1657 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Zscan22Q8BGS5 496 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Znf428Q8C1M2 176 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Brms1Q99N20 246 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ahdc1Q6PAL7 1594 aaKnown RBP10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Ces1aE9PYP1 563 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Pafah1b1P63005 410 aaKnown RBP10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Jdp2P97875 163 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Lrrc43Q3V0L5 667 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 NfkbibQ60778 359 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Glg1Q61543 1175 aaKnown RBP10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Zrsr2Q62377 462 aaKnown RBP10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Rtn1Q8K0T0 780 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Atp7bQ64446 1462 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Iqgap3F8VQ29 1632 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 HmmrQ00547 794 aaKnown RBP10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Iqsec3Q3TES0 1195 aa10.83□□□□□ -0.68
Ldlr-202ENSMUST00000213114 Vps18Q8R307 973 aa10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms