RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 1700029H14RikE9PY36 240 aa11.26□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Gm4340L7N2C4 268 aa11.26□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Dbndd1Q9CZ00 160 aa11.26□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Gadd45bP22339 160 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Sept1P42209 366 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Limch1Q3UH68 1057 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Pla2g4fQ50L41 855 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ankrd13dQ6PD24 605 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Tsr2Q8C8T8 191 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Mrpl50Q8VDT9 159 aaKnown RBP11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Kcnq5Q9JK45 933 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Sytl4Q9R0Q1 673 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Izumo3A6PWV3 263 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Pram1Q6BCL1 675 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Nyap1Q6PFX7 833 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Abtb2Q7TQI7 1024 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Cep55Q8BT07 462 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ptcd1Q8C2E4 695 aaKnown RBP11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Setdb1O88974 1307 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Cct2P80314 535 aaKnown RBP11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Cnnm3Q32NY4 713 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ccdc66Q6NS45 935 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Lmod1Q8BVA4 595 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Kiaa0319lQ8K135 1048 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 IncenpQ9WU62 880 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 FanccP50652 591 aa11.25□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 IntuQ059U7 942 aa11.24□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Tmx3Q8BXZ1 456 aa11.24□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 MypopQ8R4U1 393 aa11.24□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Krt84Q99M73 603 aa11.24□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 CpvlQ9D3S9 478 aa11.24□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Marf1Q8BJ34 1730 aaKnown RBP11.24□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Me1P06801 572 aa11.24□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 NapbP28663 298 aa11.24□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Cplx2P84086 134 aa11.24□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Sptlc3Q8BG54 563 aa11.24□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Usp44Q8C2S0 711 aa11.24□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Gm7347D3YYI9 267 aa11.24□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ube4aE9Q735 1028 aa11.24□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Speer4aF8VPX6 267 aa11.24□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Gm13023A2A8N2 498 aa11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Casp1P29452 402 aa11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Trim56Q80VI1 734 aaKnown RBP11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 SowahdQ8BY98 327 aa11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Cnot6lQ8VEG6 555 aa11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Sema6bO54951 886 aa11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Rbm26Q6NZN0 1012 aaKnown RBP11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Sde2Q8K1J5 448 aaKnown RBP11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 BrapQ99MP8 591 aa11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Pde3aQ9Z0X4 1141 aa11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ssc5dQ8BV57 1371 aa11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Syce3B5KM66 88 aa11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Afg3l2Q8JZQ2 802 aaKnown RBP11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Kcnb2A6H8H5 907 aa11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 RubcnlQ3TD16 648 aa11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Cfap69Q8BH53 942 aa11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 CrebrfQ8CDG5 640 aaKnown RBP11.23□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Cfap99A0A140LIX9 648 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Gm29094F6Q785 221 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ncaph2Q8BSP2 607 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 MthfsQ9D110 203 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Clstn1Q9EPL2 979 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Aox1O54754 1333 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Col4a1P02463 1669 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Dhx16G3X8X0 1044 aaKnown RBP11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Snai1Q02085 264 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ell2Q3UKU1 639 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ccdc178Q8CDV0 866 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Emilin1Q99K41 1017 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Mast3Q3U214 1321 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ppp1r21Q3TDD9 780 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Atad2Q8CDM1 1040 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Nup88Q8CEC0 753 aaKnown RBP11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ccar2Q8VDP4 922 aaKnown RBP11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ccer1Q9CQL2 403 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 4931400O07RikQ9D4M5 137 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Irs4Q9Z0Y7 1216 aa11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Usp42B2RQC2 1324 aaKnown RBP11.22□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Med4Q9CQA5 270 aa11.21□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Naa16Q9DBB4 864 aa11.21□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Krt85Q9Z2T6 507 aa11.21□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Ric1Q69ZJ7 1422 aa11.21□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 GabrdP22933 449 aa11.21□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Wdr93Q402B2 695 aa11.21□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Srp68Q8BMA6 625 aaKnown RBP11.21□□□□□ -0.61
Sh3rf1-202ENSMUST00000209611 Srek1Q8BZX4 494 aaKnown RBP11.21□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Slc14a2Q8R4T9 930 aa11.21□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Bicd2Q921C5 820 aa11.21□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Mrpl44Q9CY73 333 aaKnown RBP11.21□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Zbtb43Q9DAI4 467 aa11.21□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Igbp1bQ9QZ29 343 aa11.21□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Abl1P00520 1123 aa11.21□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Cyp2d10P24456 504 aa11.21□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Ube2hP62257 183 aa11.21□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Samm50Q8BGH2 469 aa11.21□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Arhgap33Q80YF9 1305 aa11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 GakQ99KY4 1305 aa11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Ppfia3P60469 1194 aa11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 ZyxQ62523 564 aa11.2□□□□□ -0.62
Sh3rf1-202ENSMUST00000209611 Map10Q8BJS7 891 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms