RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Prl3d3A0A0M6L0J6 224 aa20.27■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Ehd2Q8BH64 543 aa20.27■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Gm21698A0A087WQP8 267 aa20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Gm29094F6Q785 221 aa20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Gm21671G3UY31 267 aa20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Surf1P09925 306 aa20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 CrklP47941 303 aa20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Samsn1P57725 372 aa20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Atg9aQ68FE2 551 aa20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Frat2Q8K025 231 aa20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Ddx27Q921N6 760 aaKnown RBP20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 MthfsQ9D110 203 aa20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Usp42B2RQC2 1324 aaKnown RBP20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Ms4a1P19437 291 aa20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 NfkbibQ60778 359 aa20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Ppp4r3aQ6P2K6 820 aa20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Kcnq3Q8K3F6 873 aa20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Syde2E9PUP1 1314 aa20.26■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Anks1aP59672 1150 aa20.25■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Nlrp1aQ2LKU9 1182 aa20.25■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Atad2Q8CDM1 1040 aa20.25■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Vmn2r23E9PXI5 849 aa20.25■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Tpm1P58771 284 aa20.25■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Ankle2Q6P1H6 964 aa20.25■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Tmc2Q8R4P4 888 aa20.25■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Efcab2Q9CQ46 164 aa20.25■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Odf2lQ9D478 642 aa20.25■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Shank2Q80Z38 1476 aa20.25■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Nbr1P97432 988 aa20.24■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Ddx17Q501J6 650 aaKnown RBP20.24■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Ints4Q8CIM8 964 aa20.24■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Zkscan5Q9Z1D8 819 aa20.24■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Tns3Q5SSZ5 1440 aa20.24■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Krt25Q8VCW2 446 aa20.24■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Col14a1Q80X19 1797 aa20.24■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Ncaph2Q8BSP2 607 aa20.23■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Kiaa1524Q8BWY9 907 aa20.23■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Mei1Q9D4I2 1268 aa20.23■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Itga6Q61739 1091 aa20.23■□□□□ 0.83
Ckap4-202ENSMUST00000167671 ZyxQ62523 564 aa20.23■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Naa16Q9DBB4 864 aa20.23■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Tjp1P39447 1745 aaKnown RBP20.23■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Fam43aQ8BUP8 424 aa20.23■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Dnm3Q8BZ98 863 aa20.23■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Sptlc2P97363 560 aaKnown RBP20.22■□□□□ 0.83
Ckap4-202ENSMUST00000167671 MpndQ3TV65 487 aa20.22■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Igflr1Q3U4N7 345 aa20.22■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Sh3bp1P55194 680 aa20.22■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Sec62Q8BU14 398 aaKnown RBP20.22■□□□□ 0.83
Ckap4-202ENSMUST00000167671 IncenpQ9WU62 880 aa20.22■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Stxbp4Q9WV89 557 aa20.22■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Tcof1O08784 1320 aaKnown RBP20.21■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Irx2P81066 474 aa20.21■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Mei4Q8BRM6 389 aa20.21■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Pde3aQ9Z0X4 1141 aa20.21■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Zbtb40Q6PCS8 1258 aa20.21■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Zfp202Q8C879 641 aa20.21■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Shisa4Q8CA71 197 aa20.21■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Mrps25Q9D125 171 aaKnown RBP20.21■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Sos2Q02384 1333 aa20.21■□□□□ 0.83
Ckap4-202ENSMUST00000167671 Gm21663A0A0G2JE01 267 aa20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Dnajc25A2ALW5 357 aa20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Gm7361D3Z6R1 267 aa20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 5031410I06RikE9Q4E0 267 aa20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Gm1979E9QAN3 267 aa20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Gm5862K7N5V5 267 aa20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Gm10220K7N660 267 aa20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Morc2aQ69ZX6 1030 aa20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Srek1Q8BZX4 494 aaKnown RBP20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 CoblQ5NBX1 1337 aaKnown RBP20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Gli3Q61602 1583 aa20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Casz1Q9CWL2 1761 aa20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Slc4a1P04919 929 aa20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Tmem59lQ7TNI2 337 aa20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Nop2Q922K7 793 aaKnown RBP20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Stard3nlQ9DCI3 235 aa20.2■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Panx2Q6IMP4 677 aa20.19■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Ttc19Q8CC21 365 aa20.19■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Creld2Q9CYA0 350 aa20.19■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Large1Q9Z1M7 756 aa20.19■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Cdc45Q9Z1X9 566 aa20.19■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Topaz1E5FYH1 1653 aa20.19■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Pfkfb1P70266 471 aa20.19■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Gas2l3Q3UWW6 683 aa20.19■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Flad1Q8R123 492 aa20.19■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Cwc25Q9DBF7 416 aa20.19■□□□□ 0.82
Ckap4-202ENSMUST00000167671 TnksQ6PFX9 1320 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 CebpaP53566 359 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Gsdma2Q32M21 443 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 BcanQ61361 883 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Cep55Q8BT07 462 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Ncoa5Q91W39 579 aaKnown RBP20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Vps33aQ9D2N9 598 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Zbtb21E9Q444 1094 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Eya2O08575 532 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Myd88P22366 296 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Paxbp1P58501 919 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Acnat2Q8BGG9 420 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Rec8Q8C5S7 591 aa20.18■□□□□ 0.82
Ckap4-202ENSMUST00000167671 Lrrc2Q8VDB8 371 aa20.18■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms