RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Syce1Q9D495 329 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Gm3409A0A0G2JE67 319 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Lrriq3Q14DL3 633 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Cnga4Q3UW12 575 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ccdc89Q9DA73 370 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Plcb1Q9Z1B3 1216 aa10.49□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Dnajc8Q6NZB0 253 aaKnown RBP10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ndufab1Q9CR21 156 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Taf4E9QAP7 1042 aaKnown RBP10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Q7TT23 1179 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Spata16Q8C636 571 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Plekhg2Q6KAU7 1340 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ccdc13D3YV10 709 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 P2rx5Q3UYI1 455 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Krt18P05784 423 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Dnm1P39053 867 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Slc4a8Q8JZR6 1089 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ubac1Q8VDI7 409 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Msantd4Q91YU3 345 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Calm1P0DP26 149 aaKnown RBP10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Calm2P0DP27 149 aaKnown RBP10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Calm3P0DP28 149 aaKnown RBP10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Cers3Q1A3B0 383 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Tbc1d8bA3KGB4 1114 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Gm2030D3Z7C4 212 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Mier3Q3UHF3 551 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 4930572O03RikQ8C5Y0 211 aa10.48□□□□□ -0.73
Col6a5-201ENSMUST00000165165 EvcP57680 1005 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Spc25Q3UA16 226 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Rab11fip4Q8BQP8 635 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 PpanQ91YU8 470 aaKnown RBP10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Pdcd6ipQ9WU78 869 aaKnown RBP10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Gimap8Q75N62 688 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Rabep2Q91WG2 554 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Cc2d2bA0A286YDU8 1405 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Kifap3P70188 793 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Srek1ip1Q4V9W2 153 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Tbc1d31Q6NXY1 996 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 NsmfQ99NF2 532 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Tubb4aQ9D6F9 444 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Sbno1Q689Z5 1390 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Slc1a4O35874 532 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 GfapP03995 430 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Fbln2P37889 1221 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Cfap157Q0VFX2 523 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Scaf1Q5U4C3 1256 aaKnown RBP10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Tpd52Q62393 224 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Cplx3Q8R1B5 158 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ncf2O70145 525 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Myo1bP46735 1107 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Zfp397Q7TNK4 527 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Znf18Q810A1 556 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Micall1Q8BGT6 870 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Larp6Q8BN59 492 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Parp10Q8CIE4 960 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Fam50bQ9WTJ8 334 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 HdxQ14B70 692 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Asic1Q6NXK8 526 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Sept8Q8CHH9 429 aa10.47□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Tubb5P99024 444 aaKnown RBP10.46□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Luc7l2Q7TNC4 392 aaKnown RBP10.46□□□□□ -0.73
Col6a5-201ENSMUST00000165165 GopcQ8BH60 463 aa10.46□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Becn2P0DM65 447 aa10.46□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Zbtb3Q91X45 518 aa10.46□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Dcaf17Q3TUL7 519 aa10.46□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Atp1a2Q6PIE5 1020 aa10.46□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Ccdc113Q8C5T8 377 aa10.46□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Q9D9H8 365 aa10.46□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Chmp2aQ9DB34 222 aa10.46□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Il1rapl2Q9ERS6 686 aa10.46□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Tbc1d8Q9Z1A9 1134 aa10.46□□□□□ -0.73
Col6a5-201ENSMUST00000165165 Gm45140A0A0N4SUM8 220 aa10.46□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ift81O35594 676 aa10.46□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Igbp1Q61249 340 aa10.46□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Mterf4Q8BVN4 346 aa10.46□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Sh3gl3Q62421 347 aa10.46□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Zfp91Q62511 572 aa10.46□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Tacc2Q9JJG0 1149 aa10.46□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ncapd3Q6ZQK0 1506 aa10.46□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ppp1r21Q3TDD9 780 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ulk3Q3U3Q1 472 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Iqgap2Q3UQ44 1575 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Hdac9Q99N13 588 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Flot1O08917 428 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Q3TYL0 343 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Cage1Q5IR70 849 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Ift20Q61025 132 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Exoc3Q6KAR6 755 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Tmtc4Q8BG19 741 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 St13Q99L47 371 aaKnown RBP10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Hmgb1P63158 215 aaKnown RBP10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Efcc1Q9JJF6 558 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Pik3r4Q8VD65 1358 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Svs3aF2Z472 265 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Cetn3O35648 167 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Atp2a3Q64518 1038 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Serpinb13Q8CDC0 389 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Atf7Q8R0S1 413 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 1700013H16RikQ9DAC5 291 aa10.45□□□□□ -0.74
Col6a5-201ENSMUST00000165165 Atp1a4Q9WV27 1032 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 74.7 ms