RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Smc4Q8CG47 1286 aa21.6■■□□□ 1.05
Trim47-202ENSMUST00000106441 Bag3Q9JLV1 577 aaKnown RBP21.6■■□□□ 1.05
Trim47-202ENSMUST00000106441 Cd22P35329 862 aa21.59■■□□□ 1.05
Trim47-202ENSMUST00000106441 EappQ5BU09 281 aa21.59■■□□□ 1.05
Trim47-202ENSMUST00000106441 Greb1lB9EJV3 1913 aa21.59■■□□□ 1.05
Trim47-202ENSMUST00000106441 Pkp1P97350 728 aaKnown RBP21.58■■□□□ 1.05
Trim47-202ENSMUST00000106441 BcanQ61361 883 aa21.58■■□□□ 1.05
Trim47-202ENSMUST00000106441 Fbxo2Q80UW2 297 aa21.58■■□□□ 1.05
Trim47-202ENSMUST00000106441 Ttc27Q8CD92 847 aa21.58■■□□□ 1.05
Trim47-202ENSMUST00000106441 Bloc1s2Q9CWG9 143 aa21.58■■□□□ 1.05
Trim47-202ENSMUST00000106441 Tbc1d4Q8BYJ6 1307 aa21.58■■□□□ 1.05
Trim47-202ENSMUST00000106441 VirmaA2AIV2 1811 aaKnown RBP21.58■■□□□ 1.04
Trim47-202ENSMUST00000106441 MecomP14404 1042 aa21.58■■□□□ 1.04
Trim47-202ENSMUST00000106441 Mcm3P25206 812 aaKnown RBP21.58■■□□□ 1.04
Trim47-202ENSMUST00000106441 Esyt1Q3U7R1 1092 aaKnown RBP21.58■■□□□ 1.04
Trim47-202ENSMUST00000106441 Arid3aQ62431 601 aa21.58■■□□□ 1.04
Trim47-202ENSMUST00000106441 Cyp7a1Q64505 503 aa21.58■■□□□ 1.04
Trim47-202ENSMUST00000106441 Cep57l1Q8VDS7 400 aa21.58■■□□□ 1.04
Trim47-202ENSMUST00000106441 Dhx30Q99PU8 1217 aaKnown RBP21.58■■□□□ 1.04
Trim47-202ENSMUST00000106441 Irx4Q9QY61 515 aa21.58■■□□□ 1.04
Trim47-202ENSMUST00000106441 Add3Q9QYB5 706 aaKnown RBP21.58■■□□□ 1.04
Trim47-202ENSMUST00000106441 Hmg20bQ9Z104 317 aa21.58■■□□□ 1.04
Trim47-202ENSMUST00000106441 Plcb3P51432 1234 aaKnown RBP21.57■■□□□ 1.04
Trim47-202ENSMUST00000106441 Cfap157Q0VFX2 523 aa21.57■■□□□ 1.04
Trim47-202ENSMUST00000106441 1810065E05RikQ5NC41 235 aa21.57■■□□□ 1.04
Trim47-202ENSMUST00000106441 Kiaa0753Q6A000 959 aa21.57■■□□□ 1.04
Trim47-202ENSMUST00000106441 Ccdc66Q6NS45 935 aa21.57■■□□□ 1.04
Trim47-202ENSMUST00000106441 Col23a1Q8K4G2 532 aa21.57■■□□□ 1.04
Trim47-202ENSMUST00000106441 Slc26a8Q8R0C3 999 aa21.57■■□□□ 1.04
Trim47-202ENSMUST00000106441 Usp25P57080 1055 aa21.57■■□□□ 1.04
Trim47-202ENSMUST00000106441 PhaxQ9JJT9 385 aaKnown RBP21.57■■□□□ 1.04
Trim47-202ENSMUST00000106441 Sytl4Q9R0Q1 673 aa21.57■■□□□ 1.04
Trim47-202ENSMUST00000106441 Ptgs1P22437 602 aa21.56■■□□□ 1.04
Trim47-202ENSMUST00000106441 F2rP30558 430 aa21.56■■□□□ 1.04
Trim47-202ENSMUST00000106441 Mrpl50Q8VDT9 159 aaKnown RBP21.56■■□□□ 1.04
Trim47-202ENSMUST00000106441 Dbndd1Q9CZ00 160 aa21.56■■□□□ 1.04
Trim47-202ENSMUST00000106441 Mmel1Q9JLI3 765 aa21.56■■□□□ 1.04
Trim47-202ENSMUST00000106441 Zkscan7E9PVW1 718 aa21.55■■□□□ 1.04
Trim47-202ENSMUST00000106441 FanccP50652 591 aa21.55■■□□□ 1.04
Trim47-202ENSMUST00000106441 Nol10Q5RJG1 687 aaKnown RBP21.55■■□□□ 1.04
Trim47-202ENSMUST00000106441 Rps6kb1Q8BSK8 525 aa21.55■■□□□ 1.04
Trim47-202ENSMUST00000106441 Foxo3Q9WVH4 672 aa21.55■■□□□ 1.04
Trim47-202ENSMUST00000106441 Sp8Q8BMJ8 486 aa21.55■■□□□ 1.04
Trim47-202ENSMUST00000106441 Polr3dQ91WD1 398 aa21.55■■□□□ 1.04
Trim47-202ENSMUST00000106441 Il1rapl2Q9ERS6 686 aa21.55■■□□□ 1.04
Trim47-202ENSMUST00000106441 IncenpQ9WU62 880 aa21.55■■□□□ 1.04
Trim47-202ENSMUST00000106441 Kif13bA0A286YCV9 1847 aa21.55■■□□□ 1.04
Trim47-202ENSMUST00000106441 Nucb2P81117 420 aa21.54■■□□□ 1.04
Trim47-202ENSMUST00000106441 RubcnlQ3TD16 648 aa21.54■■□□□ 1.04
Trim47-202ENSMUST00000106441 Adora1Q60612 326 aa21.54■■□□□ 1.04
Trim47-202ENSMUST00000106441 Trim34bJ3QNR8 485 aa21.54■■□□□ 1.04
Trim47-202ENSMUST00000106441 Zbtb38Q3LR78 1197 aa21.54■■□□□ 1.04
Trim47-202ENSMUST00000106441 Oxsr1Q6P9R2 527 aa21.54■■□□□ 1.04
Trim47-202ENSMUST00000106441 Bmp2kQ91Z96 1138 aa21.54■■□□□ 1.04
Trim47-202ENSMUST00000106441 Ugt1a5B2RT14 529 aa21.53■■□□□ 1.04
Trim47-202ENSMUST00000106441 Babam1Q3UI43 333 aa21.53■■□□□ 1.04
Trim47-202ENSMUST00000106441 Zfp251Q6PCX8 632 aa21.53■■□□□ 1.04
Trim47-202ENSMUST00000106441 Plcd3Q8K2J0 785 aa21.53■■□□□ 1.04
Trim47-202ENSMUST00000106441 Slurp2P0DP59 97 aa21.53■■□□□ 1.04
Trim47-202ENSMUST00000106441 Wdhd1P59328 1117 aa21.53■■□□□ 1.04
Trim47-202ENSMUST00000106441 Cnnm3Q32NY4 713 aa21.53■■□□□ 1.04
Trim47-202ENSMUST00000106441 Togaram1Q6A070 1776 aaKnown RBP21.53■■□□□ 1.04
Trim47-202ENSMUST00000106441 Snx13Q6PHS6 957 aa21.53■■□□□ 1.04
Trim47-202ENSMUST00000106441 AtrnQ9WU60 1428 aa21.52■■□□□ 1.04
Trim47-202ENSMUST00000106441 Cavin1O54724 392 aa21.52■■□□□ 1.04
Trim47-202ENSMUST00000106441 Adam1bQ8R534 806 aa21.52■■□□□ 1.04
Trim47-202ENSMUST00000106441 Prdm11A2AGX3 565 aa21.51■■□□□ 1.03
Trim47-202ENSMUST00000106441 Gm973E9Q295 1059 aa21.51■■□□□ 1.03
Trim47-202ENSMUST00000106441 Mdm2P23804 489 aa21.51■■□□□ 1.03
Trim47-202ENSMUST00000106441 ErfeQ6PGN1 340 aa21.51■■□□□ 1.03
Trim47-202ENSMUST00000106441 Edc3Q8K2D3 508 aaKnown RBP21.51■■□□□ 1.03
Trim47-202ENSMUST00000106441 Nop14Q8R3N1 860 aaKnown RBP21.51■■□□□ 1.03
Trim47-202ENSMUST00000106441 Ttc14Q9CSP9 761 aa21.51■■□□□ 1.03
Trim47-202ENSMUST00000106441 Zbtb22Q9Z0G7 638 aa21.51■■□□□ 1.03
Trim47-202ENSMUST00000106441 Fbxl16A2RT62 479 aa21.51■■□□□ 1.03
Trim47-202ENSMUST00000106441 Prl3d2F6R3P9 224 aa21.51■■□□□ 1.03
Trim47-202ENSMUST00000106441 Zbtb45Q52KG4 520 aa21.51■■□□□ 1.03
Trim47-202ENSMUST00000106441 Hmgn5Q9JL35 406 aa21.51■■□□□ 1.03
Trim47-202ENSMUST00000106441 Rab3gap1Q80UJ7 981 aa21.5■■□□□ 1.03
Trim47-202ENSMUST00000106441 R3hcc1Q8BSI6 488 aa21.5■■□□□ 1.03
Trim47-202ENSMUST00000106441 Plcd1Q8R3B1 756 aa21.5■■□□□ 1.03
Trim47-202ENSMUST00000106441 Emilin1Q99K41 1017 aa21.5■■□□□ 1.03
Trim47-202ENSMUST00000106441 Trpc5Q9QX29 975 aa21.5■■□□□ 1.03
Trim47-202ENSMUST00000106441 Krt85Q9Z2T6 507 aa21.5■■□□□ 1.03
Trim47-202ENSMUST00000106441 Ets1P27577 440 aa21.5■■□□□ 1.03
Trim47-202ENSMUST00000106441 Prom2Q3UUY6 835 aa21.5■■□□□ 1.03
Trim47-202ENSMUST00000106441 Tmem87bQ8BKU8 555 aa21.5■■□□□ 1.03
Trim47-202ENSMUST00000106441 Ndufa8Q9DCJ5 172 aa21.5■■□□□ 1.03
Trim47-202ENSMUST00000106441 IbspQ61711 324 aa21.49■■□□□ 1.03
Trim47-202ENSMUST00000106441 Jarid2Q62315 1234 aa21.49■■□□□ 1.03
Trim47-202ENSMUST00000106441 Tsr2Q8C8T8 191 aa21.49■■□□□ 1.03
Trim47-202ENSMUST00000106441 Tyro3P55144 880 aa21.48■■□□□ 1.03
Trim47-202ENSMUST00000106441 Fam13bQ8K2H3 851 aa21.48■■□□□ 1.03
Trim47-202ENSMUST00000106441 StrbpQ91WM1 672 aaKnown RBP21.48■■□□□ 1.03
Trim47-202ENSMUST00000106441 Srgap1Q91Z69 1062 aa21.48■■□□□ 1.03
Trim47-202ENSMUST00000106441 CgnP59242 1191 aa21.48■■□□□ 1.03
Trim47-202ENSMUST00000106441 TnmdQ9EP64 317 aa21.48■■□□□ 1.03
Trim47-202ENSMUST00000106441 Ppp1r10Q80W00 888 aaKnown RBP21.47■■□□□ 1.03
Trim47-202ENSMUST00000106441 St5Q924W7 1134 aa21.47■■□□□ 1.03
Trim47-202ENSMUST00000106441 ZwintQ9CQU5 252 aa21.47■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms