RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 GphnQ8BUV3 769 aaKnown RBP12.09□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Trappc8E9PWG2 1437 aa12.09□□□□□ -0.47
Nipbl-201ENSMUST00000052965 AatfQ9JKX4 526 aaKnown RBP12.09□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Becn2P0DM65 447 aa12.09□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Mug2P28666 1451 aa12.09□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Ccdc160Q3UYG1 323 aa12.09□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Maip1Q8BHE8 291 aa12.09□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Surf6P70279 355 aaKnown RBP12.08□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Hoxb7P09024 217 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Hmgb1P63158 215 aaKnown RBP12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Ccdc122Q8BVN0 290 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 SphkapQ6NSW3 1687 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Kdm5cP41230 1554 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Utp18Q5SSI6 552 aaKnown RBP12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Nlrp3Q8R4B8 1033 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 AmfrQ9R049 643 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Ankrd35E9Q9D8 996 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Ublcp1Q8BGR9 318 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Gbp6A0A0G2JDV3 611 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Gm43302L7N1X8 611 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 DesP31001 469 aaKnown RBP12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Znf287Q9EQB9 759 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Zfp42P22227 288 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Ppp1r12cQ3UMT1 782 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Ankrd40Q5SUE8 363 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Aldh1l2Q8K009 923 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Wdr7Q920I9 1489 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Cpsf1Q9EPU4 1441 aaKnown RBP12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Serpinb1cQ5SV42 375 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Idi2Q8BFZ6 227 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Rnf41Q8BH75 317 aa12.08□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Nol11Q8BJW5 723 aaKnown RBP12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Frat2Q8K025 231 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Saal1Q9D2C2 474 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Atp10dQ8K2X1 1416 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Zkscan16A2ALW2 728 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 GpkowQ56A08 488 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Lrrc8aQ80WG5 810 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Drc1Q3USS3 753 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Gm21985Q6P6P5 1106 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Matr3Q8K310 846 aaKnown RBP12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Mphosph6Q9D1Q1 161 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Klhl10Q9D5V2 608 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Metap2O08663 478 aaKnown RBP12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Ccdc174Q3U155 467 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Q3UJC8 639 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Igbp1Q61249 340 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Exoc1Q8R3S6 894 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Rsph3bQ9DA80 389 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Lrrc23O35125 340 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 NapbP28663 298 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Tbc1d2bQ3U0J8 965 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Gkap1Q9JMB0 366 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 IkQ9Z1M8 557 aaKnown RBP12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Adgrl2Q8JZZ7 1487 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Nfxl1E9Q8I7 918 aaKnown RBP12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Capza3P70190 299 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Cfap69Q8BH53 942 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Tshz3Q8CGV9 1081 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Pak2Q8CIN4 524 aa12.07□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Krt7Q9DCV7 457 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Prpf40aQ9R1C7 953 aaKnown RBP12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Ssh2Q5SW75 1423 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Heatr4E9Q357 955 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Sf3b2Q3UJB0 878 aaKnown RBP12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Fhdc1Q3ULZ2 1149 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Sh3gl3Q62421 347 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Spats2lQ91WJ7 558 aaKnown RBP12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Mxra7Q9CZH7 178 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 ChmQ9QXG2 665 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Rufy3Q9D394 469 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 AdnpQ9Z103 1108 aaKnown RBP12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Krt90E9Q1Z0 538 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Evi5P97366 809 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Atp8b1Q148W0 1251 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Efhd1Q9D4J1 240 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Trove2O08848 538 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Osbpl1aQ91XL9 950 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Pkd2l2Q9JLG4 621 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Igsf3Q6ZQA6 1194 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Cfap100Q80VN0 613 aa12.06□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Myh10Q61879 1976 aaKnown RBP12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Ess2O70279 479 aa12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Vps41Q5KU39 853 aa12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Tmx1Q8VBT0 278 aa12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Rrs1Q9CYH6 365 aaKnown RBP12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Tmco5aQ9D9D5 303 aa12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Olr1Q9EQ09 363 aa12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Cep152A2AUM9 1736 aaKnown RBP12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Pdzrn3Q69ZS0 1063 aa12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Filip1Q9CS72 1211 aa12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Cyp27a1Q9DBG1 533 aa12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Skint5A7XUY5 1461 aa12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 CltaO08585 235 aa12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Hmgb2P30681 210 aaKnown RBP12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Asic3Q6X1Y6 530 aa12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Rnf168Q80XJ2 565 aa12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Ppm1fQ8CGA0 452 aa12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Gpr161B2RPY5 545 aa12.05□□□□□ -0.48
Nipbl-201ENSMUST00000052965 Actn3O88990 900 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms