RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Foxo3Q9WVH4 672 aa27.3■■□□□ 1.96
Cln6-201ENSMUST00000034776 Arhgap33Q80YF9 1305 aa27.3■■□□□ 1.96
Cln6-201ENSMUST00000034776 Nol12Q8BG17 217 aa27.29■■□□□ 1.96
Cln6-201ENSMUST00000034776 HmcesQ8R1M0 353 aaKnown RBP27.29■■□□□ 1.96
Cln6-201ENSMUST00000034776 Sf3b3Q921M3 1217 aaKnown RBP27.29■■□□□ 1.96
Cln6-201ENSMUST00000034776 Duox1A2AQ92 1551 aa27.29■■□□□ 1.96
Cln6-201ENSMUST00000034776 GabrdP22933 449 aa27.29■■□□□ 1.96
Cln6-201ENSMUST00000034776 Cyp2d9P11714 504 aa27.28■■□□□ 1.96
Cln6-201ENSMUST00000034776 Wdr93Q402B2 695 aa27.28■■□□□ 1.96
Cln6-201ENSMUST00000034776 Znf496Q5SXI5 585 aa27.28■■□□□ 1.96
Cln6-201ENSMUST00000034776 Shisa4Q8CA71 197 aa27.28■■□□□ 1.96
Cln6-201ENSMUST00000034776 Gm9992B2RWK3 458 aa27.28■■□□□ 1.96
Cln6-201ENSMUST00000034776 1700029H14RikE9PY36 240 aa27.28■■□□□ 1.96
Cln6-201ENSMUST00000034776 Usp48Q3V0C5 1052 aa27.28■■□□□ 1.96
Cln6-201ENSMUST00000034776 Unc93aQ710D3 458 aa27.28■■□□□ 1.96
Cln6-201ENSMUST00000034776 Glipr1l2Q9CQ35 332 aa27.28■■□□□ 1.96
Cln6-201ENSMUST00000034776 Bloc1s2Q9CWG9 143 aa27.28■■□□□ 1.96
Cln6-201ENSMUST00000034776 Pde3aQ9Z0X4 1141 aa27.28■■□□□ 1.96
Cln6-201ENSMUST00000034776 Pde4bB1AWC9 736 aa27.27■■□□□ 1.96
Cln6-201ENSMUST00000034776 DpydQ8CHR6 1025 aa27.27■■□□□ 1.96
Cln6-201ENSMUST00000034776 Adam1bQ8R534 806 aa27.27■■□□□ 1.96
Cln6-201ENSMUST00000034776 Alx1Q8C8B0 326 aa27.26■■□□□ 1.96
Cln6-201ENSMUST00000034776 Pcdhb9E9Q5G2 828 aa27.26■■□□□ 1.95
Cln6-201ENSMUST00000034776 Cyp2d34L7N463 504 aa27.26■■□□□ 1.95
Cln6-201ENSMUST00000034776 EappQ5BU09 281 aa27.26■■□□□ 1.95
Cln6-201ENSMUST00000034776 Zfp113Q8C689 439 aa27.26■■□□□ 1.95
Cln6-201ENSMUST00000034776 Mroh6V9GX81 722 aa27.26■■□□□ 1.95
Cln6-201ENSMUST00000034776 Ufl1Q8CCJ3 793 aaKnown RBP27.25■■□□□ 1.95
Cln6-201ENSMUST00000034776 Cep57l1Q8VDS7 400 aa27.25■■□□□ 1.95
Cln6-201ENSMUST00000034776 NaspQ99MD9 773 aaKnown RBP27.25■■□□□ 1.95
Cln6-201ENSMUST00000034776 Srp68Q8BMA6 625 aaKnown RBP27.25■■□□□ 1.95
Cln6-201ENSMUST00000034776 Sept12Q9D451 317 aa27.25■■□□□ 1.95
Cln6-201ENSMUST00000034776 Gja10Q9WUS4 505 aa27.24■■□□□ 1.95
Cln6-201ENSMUST00000034776 Ppp6r1Q7TSI3 856 aa27.23■■□□□ 1.95
Cln6-201ENSMUST00000034776 Ncaph2Q8BSP2 607 aa27.23■■□□□ 1.95
Cln6-201ENSMUST00000034776 Myh3P13541 1940 aa27.23■■□□□ 1.95
Cln6-201ENSMUST00000034776 Nup98Q6PFD9 1816 aaKnown RBP27.23■■□□□ 1.95
Cln6-201ENSMUST00000034776 Spty2d1Q68FG3 682 aa27.23■■□□□ 1.95
Cln6-201ENSMUST00000034776 Me3Q8BMF3 604 aa27.23■■□□□ 1.95
Cln6-201ENSMUST00000034776 Pald1P70261 859 aa27.22■■□□□ 1.95
Cln6-201ENSMUST00000034776 ImmtQ8CAQ8 757 aaKnown RBP27.22■■□□□ 1.95
Cln6-201ENSMUST00000034776 BrapQ99MP8 591 aa27.22■■□□□ 1.95
Cln6-201ENSMUST00000034776 Ercc3P49135 783 aa27.22■■□□□ 1.95
Cln6-201ENSMUST00000034776 Hand2Q61039 217 aa27.22■■□□□ 1.95
Cln6-201ENSMUST00000034776 RtcbQ99LF4 505 aaKnown RBP27.22■■□□□ 1.95
Cln6-201ENSMUST00000034776 Dbndd1Q9CZ00 160 aa27.22■■□□□ 1.95
Cln6-201ENSMUST00000034776 Popdc2Q9ES82 367 aa27.22■■□□□ 1.95
Cln6-201ENSMUST00000034776 Il4rP16382 810 aa27.21■■□□□ 1.95
Cln6-201ENSMUST00000034776 Leo1Q5XJE5 667 aa27.21■■□□□ 1.95
Cln6-201ENSMUST00000034776 Pla2g4fQ50L41 855 aa27.2■■□□□ 1.95
Cln6-201ENSMUST00000034776 Lgr5Q9Z1P4 907 aa27.2■■□□□ 1.95
Cln6-201ENSMUST00000034776 Gm29094F6Q785 221 aa27.2■■□□□ 1.94
Cln6-201ENSMUST00000034776 Kcnq3Q8K3F6 873 aa27.2■■□□□ 1.94
Cln6-201ENSMUST00000034776 MthfsQ9D110 203 aa27.2■■□□□ 1.94
Cln6-201ENSMUST00000034776 Vsig10D3YX43 558 aa27.19■■□□□ 1.94
Cln6-201ENSMUST00000034776 Smarcc2Q6PDG5 1213 aa27.19■■□□□ 1.94
Cln6-201ENSMUST00000034776 Ube3cQ80U95 1083 aa27.19■■□□□ 1.94
Cln6-201ENSMUST00000034776 HdlbpQ8VDJ3 1268 aaKnown RBP27.19■■□□□ 1.94
Cln6-201ENSMUST00000034776 Pms1Q8K119 917 aa27.19■■□□□ 1.94
Cln6-201ENSMUST00000034776 Iffo2Q8R2V2 512 aa27.19■■□□□ 1.94
Cln6-201ENSMUST00000034776 Tktl2Q9D4D4 627 aa27.19■■□□□ 1.94
Cln6-201ENSMUST00000034776 4931400O07RikQ9D4M5 137 aa27.19■■□□□ 1.94
Cln6-201ENSMUST00000034776 Ubn2Q80WC1 1314 aa27.18■■□□□ 1.94
Cln6-201ENSMUST00000034776 Pram1Q6BCL1 675 aa27.17■■□□□ 1.94
Cln6-201ENSMUST00000034776 ZwintQ9CQU5 252 aa27.17■■□□□ 1.94
Cln6-201ENSMUST00000034776 FliiQ9JJ28 1271 aa27.17■■□□□ 1.94
Cln6-201ENSMUST00000034776 Ccdc66Q6NS45 935 aa27.17■■□□□ 1.94
Cln6-201ENSMUST00000034776 Mast3Q3U214 1321 aa27.16■■□□□ 1.94
Cln6-201ENSMUST00000034776 ErmnQ5EBJ4 281 aa27.16■■□□□ 1.94
Cln6-201ENSMUST00000034776 Mad1l1Q9WTX8 717 aaKnown RBP27.16■■□□□ 1.94
Cln6-201ENSMUST00000034776 Zfyve9A2A8R0 1397 aa27.16■■□□□ 1.94
Cln6-201ENSMUST00000034776 Limch1Q3UH68 1057 aa27.16■■□□□ 1.94
Cln6-201ENSMUST00000034776 CpvlQ9D3S9 478 aa27.15■■□□□ 1.94
Cln6-201ENSMUST00000034776 Cypt2Q6P924 180 aa27.14■■□□□ 1.94
Cln6-201ENSMUST00000034776 Lmod1Q8BVA4 595 aa27.14■■□□□ 1.94
Cln6-201ENSMUST00000034776 McamQ8R2Y2 648 aaKnown RBP27.14■■□□□ 1.94
Cln6-201ENSMUST00000034776 Tbc1d7Q9D0K0 293 aa27.14■■□□□ 1.94
Cln6-201ENSMUST00000034776 Pes1Q9EQ61 584 aaKnown RBP27.14■■□□□ 1.94
Cln6-201ENSMUST00000034776 Myh15E9Q264 1925 aa27.14■■□□□ 1.93
Cln6-201ENSMUST00000034776 GalcP54818 684 aa27.14■■□□□ 1.93
Cln6-201ENSMUST00000034776 Osbpl5Q9ER64 874 aa27.14■■□□□ 1.93
Cln6-201ENSMUST00000034776 Frmd7A2AD83 703 aa27.13■■□□□ 1.93
Cln6-201ENSMUST00000034776 IntuQ059U7 942 aa27.13■■□□□ 1.93
Cln6-201ENSMUST00000034776 Ccdc178Q8CDV0 866 aa27.13■■□□□ 1.93
Cln6-201ENSMUST00000034776 Dnttip2Q8R2M2 758 aaKnown RBP27.13■■□□□ 1.93
Cln6-201ENSMUST00000034776 Rufy2Q8R4C2 606 aa27.13■■□□□ 1.93
Cln6-201ENSMUST00000034776 Sh3bp5lQ99LH9 392 aa27.13■■□□□ 1.93
Cln6-201ENSMUST00000034776 IcoslgQ9JHJ8 322 aa27.13■■□□□ 1.93
Cln6-201ENSMUST00000034776 Kif4P33174 1231 aa27.13■■□□□ 1.93
Cln6-201ENSMUST00000034776 Eva1cP58659 440 aa27.13■■□□□ 1.93
Cln6-201ENSMUST00000034776 Amhr2Q8K592 568 aa27.13■■□□□ 1.93
Cln6-201ENSMUST00000034776 Pcdhb22Q91XZ8 794 aa27.13■■□□□ 1.93
Cln6-201ENSMUST00000034776 Cyp3a59D3Z2W7 503 aa27.12■■□□□ 1.93
Cln6-201ENSMUST00000034776 Rhbdl3P58873 404 aa27.12■■□□□ 1.93
Cln6-201ENSMUST00000034776 Ube2hP62257 183 aa27.12■■□□□ 1.93
Cln6-201ENSMUST00000034776 Washc4Q3UMB9 1173 aa27.12■■□□□ 1.93
Cln6-201ENSMUST00000034776 Fnbp4Q6ZQ03 1031 aa27.12■■□□□ 1.93
Cln6-201ENSMUST00000034776 Cnot6lQ8VEG6 555 aa27.12■■□□□ 1.93
Cln6-201ENSMUST00000034776 ParvgQ9ERD8 331 aa27.12■■□□□ 1.93
Cln6-201ENSMUST00000034776 Atp8b3Q6UQ17 1335 aa27.12■■□□□ 1.93
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms