RNA–Protein interactions for RNA: ENSMUST00000032487.13

Vamp1-201, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vamp1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-201ENSMUST00000032487 Dhx40Q6PE54 779 aaKnown RBP13.49□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Cbx8Q9QXV1 362 aa13.49□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Nfu1Q9QZ23 255 aa13.49□□□□□ -0.25
Vamp1-201ENSMUST00000032487 CoblQ5NBX1 1337 aaKnown RBP13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Nphp3Q7TNH6 1325 aa13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Exoc3l2D3YUP5 789 aa13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Tnnt1O88346 262 aa13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Klra9Q2TJJ8 266 aa13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Cep63Q3UPP8 700 aa13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Unc5clQ6R653 518 aa13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Tti2Q8BGV4 512 aa13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Zfp113Q8C689 439 aa13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 AvenQ9D9K3 342 aa13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Klra10Q9R1G6 266 aa13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Stk11Q9WTK7 436 aa13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Ubr1O70481 1757 aa13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Pde11aP0C1Q2 933 aa13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Eif3cQ8R1B4 911 aaKnown RBP13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Synpo2Q91YE8 1087 aaKnown RBP13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Add2Q9QYB8 725 aa13.48□□□□□ -0.25
Vamp1-201ENSMUST00000032487 1700006A11RikB9EHI3 544 aa13.47□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Gm6588E9Q3K0 461 aa13.47□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Ncoa7Q6DFV7 943 aa13.47□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Zbtb40Q6PCS8 1258 aa13.47□□□□□ -0.25
Vamp1-201ENSMUST00000032487 LarsQ8BMJ2 1178 aa13.47□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Rsrc2A2RTL5 376 aaKnown RBP13.47□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Cnbd1B1AWM0 430 aa13.47□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Tmed8Q3UHI4 326 aa13.47□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Sgsm2Q80U12 1005 aa13.47□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Prkag3Q8BGM7 489 aa13.47□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Tpx2A2APB8 745 aaKnown RBP13.46□□□□□ -0.25
Vamp1-201ENSMUST00000032487 1700113H08RikE9Q9Q5 327 aa13.46□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Stx1aO35526 288 aa13.46□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Mmp8O70138 465 aa13.46□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Hoxc9P09633 260 aa13.46□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Cfap100Q80VN0 613 aa13.46□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Srgap3Q812A2 1099 aa13.46□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Slx1bQ8BX32 270 aa13.46□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Plcd1Q8R3B1 756 aa13.46□□□□□ -0.25
Vamp1-201ENSMUST00000032487 Rsph10bE9PYQ0 876 aa13.46□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Clec11aO88200 328 aa13.46□□□□□ -0.26
Vamp1-201ENSMUST00000032487 GclcP97494 637 aa13.46□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Klra5Q60652 266 aa13.46□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Bicdl2Q8CHW5 507 aa13.46□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Evc2Q8K1G2 1220 aa13.46□□□□□ -0.26
Vamp1-201ENSMUST00000032487 SarnpQ9D1J3 210 aaKnown RBP13.46□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Pard3Q99NH2 1333 aa13.45□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Lig3P97386 1015 aa13.45□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Ppp1r42Q8R1Z4 357 aa13.45□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Smc1bQ920F6 1248 aa13.45□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Map2P20357 1828 aa13.45□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Lnx1O70263 728 aa13.45□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Sgsm1Q8BPQ7 1093 aa13.45□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Trim66Q924W6 1242 aa13.45□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Cabp2Q9JLK4 216 aa13.45□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Ccdc129Q14B48 1034 aa13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Hspa4Q61316 841 aa13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Ccne1Q61457 408 aa13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Ccdc40Q8BI79 1192 aa13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Krt85Q9Z2T6 507 aa13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Tbc1d2B1AVH7 922 aa13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Eef2kO08796 724 aa13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Hnrnph1O35737 449 aaKnown RBP13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Gnai2P08752 355 aaKnown RBP13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 F2rP30558 430 aa13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Hnrnph2P70333 449 aaKnown RBP13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Evi5P97366 809 aa13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Ccdc33Q3ULW6 985 aa13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 RgmbQ7TQ33 436 aa13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Baiap3Q80TT2 1134 aa13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Ubxn4Q8VCH8 506 aa13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Abcb6Q9DC29 842 aa13.44□□□□□ -0.26
Vamp1-201ENSMUST00000032487 A0A1L1SQF0 893 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Ppfia4B8QI36 1187 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Lrrc6O88978 473 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Mdh1P14152 334 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Ddx49Q4FZF3 480 aaKnown RBP13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Calcoco1Q8CGU1 691 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Pcdhb15Q91Y04 786 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 MicalclQ9D5U9 680 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Aox1O54754 1333 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Trim25Q61510 634 aaKnown RBP13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Hoxa7P02830 229 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Ppp1r15aP17564 657 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Cdc37Q61081 379 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 HrQ61645 1182 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Q66JV7 365 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Erlin2Q8BFZ9 340 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Q8BZJ8 459 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Q8C1R3 189 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Q9D9S1 216 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Xpo4Q9ESJ0 1151 aa13.43□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Prim1P20664 417 aa13.42□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Map2k1P31938 393 aa13.42□□□□□ -0.26
Vamp1-201ENSMUST00000032487 CrklP47941 303 aa13.42□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Fbxw10Q5SUS0 1030 aa13.42□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Trerf1Q8BXJ2 1205 aa13.42□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Wdr60Q8C761 999 aa13.42□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Ccdc186Q8C9S4 917 aa13.42□□□□□ -0.26
Vamp1-201ENSMUST00000032487 Golph3lQ8R088 285 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms