RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Nsfl1cQ9CZ44 370 aaKnown RBP11.47□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Atp1a2Q6PIE5 1020 aa11.46□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Atp6v0a4Q920R6 833 aa11.46□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Slc8a1P70414 970 aa11.46□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Sun3Q5SS91 320 aa11.46□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Hirip3Q8BLH7 601 aa11.46□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Pabpn1Q8CCS6 302 aaKnown RBP11.46□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Haus2Q9CQS9 234 aa11.46□□□□□ -0.57
Ubr1-201ENSMUST00000028728 IkQ9Z1M8 557 aaKnown RBP11.46□□□□□ -0.57
Ubr1-201ENSMUST00000028728 ByslO54825 436 aaKnown RBP11.46□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Agbl1Q09M05 972 aa11.46□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Gapvd1Q6PAR5 1458 aa11.46□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Hand2Q61039 217 aa11.46□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Lrrc8aQ80WG5 810 aa11.46□□□□□ -0.57
Ubr1-201ENSMUST00000028728 Supt6hQ62383 1726 aaKnown RBP11.46□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Lman1Q9D0F3 517 aa11.46□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Xpo4Q9ESJ0 1151 aa11.46□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Grm8P47743 908 aa11.46□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Spa17Q62252 149 aa11.46□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Vps37dQ810I0 261 aa11.46□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Apol7cQ8C6E1 369 aa11.46□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Zfp213E9QAW0 468 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Serpinc1P32261 465 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Ppfia3P60469 1194 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Ubash3aQ3V3E1 624 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Cnot6lQ8VEG6 555 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Apol7aB2RT54 418 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 GnaqP21279 359 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 FanccP50652 591 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Ncaph2Q8BSP2 607 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Nup133Q8R0G9 1155 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Tbc1d7Q9D0K0 293 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 ChmQ9QXG2 665 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Q3UJC8 639 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 4933428M09RikQ9D3X3 192 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Lztfl1Q9JHQ5 299 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Irx1P81068 480 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Pak2Q8CIN4 524 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Terf2ipQ91VL8 393 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 DesP31001 469 aaKnown RBP11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Cpsf2O35218 782 aaKnown RBP11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Calm1P0DP26 149 aaKnown RBP11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Calm2P0DP27 149 aaKnown RBP11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Calm3P0DP28 149 aaKnown RBP11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Acsbg1Q99PU5 721 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Amotl1Q9D4H4 968 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Mapk8ip1Q9WVI9 707 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Thoc2B1AZI6 1594 aaKnown RBP11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Lrrc9Q8CDN9 1456 aa11.45□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Ankrd35E9Q9D8 996 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Ccne1Q61457 408 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Asic3Q6X1Y6 530 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Cct5P80316 541 aaKnown RBP11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Ttll12Q3UDE2 639 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Zbtb21E9Q444 1094 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Myd88P22366 296 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Pabpn1lQ5XFR0 273 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Klhl40Q9D783 621 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Krt7Q9DCV7 457 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Letm1Q9Z2I0 738 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Cbfa2t2O70374 594 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Krt77Q6IFZ6 572 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Gbp9Q8BTS3 619 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Grin2aP35436 1464 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Kiaa1211Q5PR69 1207 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Cyp4f39Q8BGU0 532 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Bicdl2Q8CHW5 507 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Cwc25Q9DBF7 416 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Pde4bB1AWC9 736 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Kcnh3Q9WVJ0 1095 aa11.44□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Sox13Q04891 613 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Prm3Q62100 101 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 BC005561E9Q5E2 1589 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Speer4dL7N216 212 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Ublcp1Q8BGR9 318 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Mdm2P23804 489 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Ano9P86044 747 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Mcm10Q0VBD2 885 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Swap70Q6A028 585 aaKnown RBP11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Hgh1Q8C3I8 393 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Pde5aQ8CG03 865 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 DymQ8CHY3 669 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Ccdc14Q8K2J4 934 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 PtprgQ05909 1442 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Klhdc4Q921I2 584 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Angptl3Q9R182 455 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Myom2Q14BI5 1463 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 F2rP30558 430 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Ctnna2Q61301 953 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Ncoa3O09000 1398 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Rfc1P35601 1131 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Kiaa1328Q6NZK5 612 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Zfp202Q8C879 641 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 ZgpatQ8VDM1 511 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Cib2Q9Z309 187 aa11.43□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Edc4Q3UJB9 1406 aaKnown RBP11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Tmx1Q8VBT0 278 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Mlh1Q9JK91 760 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Cep63Q3UPP8 700 aa11.42□□□□□ -0.58
Ubr1-201ENSMUST00000028728 Cacna2d4Q5RJF7 1116 aa11.42□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms