RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 TP63Q9H3D4 680 aaPredicted RBP20.65■□□□□ 0.9
SLIT3-204ENST00000518140 ACKR4Q9NPB9 350 aa20.65■□□□□ 0.9
SLIT3-204ENST00000518140 PRRC2CQ9Y520 2896 aaKnown RBP20.65■□□□□ 0.9
SLIT3-204ENST00000518140 TMCC2O75069 709 aa20.65■□□□□ 0.9
SLIT3-204ENST00000518140 SRSF10O75494 262 aaKnown RBP20.65■□□□□ 0.9
SLIT3-204ENST00000518140 GATBO75879 557 aaKnown RBP20.65■□□□□ 0.9
SLIT3-204ENST00000518140 IL7P13232 177 aa20.65■□□□□ 0.9
SLIT3-204ENST00000518140 MYL9P24844 172 aa20.65■□□□□ 0.9
SLIT3-204ENST00000518140 SOX2P48431 317 aa20.65■□□□□ 0.9
SLIT3-204ENST00000518140 ZNF676Q8N7Q3 588 aa20.65■□□□□ 0.9
SLIT3-204ENST00000518140 SLAMF6Q96DU3 332 aa20.65■□□□□ 0.9
SLIT3-204ENST00000518140 RBM24Q9BX46 236 aaKnown RBP20.65■□□□□ 0.9
SLIT3-204ENST00000518140 COMMD3Q9UBI1 195 aa20.65■□□□□ 0.9
SLIT3-204ENST00000518140 ASH2LQ9UBL3 628 aa20.65■□□□□ 0.9
SLIT3-204ENST00000518140 GDF2Q9UK05 429 aaPredicted RBP20.65■□□□□ 0.9
SLIT3-204ENST00000518140 EMC9Q9Y3B6 208 aa20.65■□□□□ 0.9
SLIT3-204ENST00000518140 CEACAM4O75871 244 aa20.64■□□□□ 0.89
SLIT3-204ENST00000518140 ZNF133P52736 654 aaPredicted RBP20.64■□□□□ 0.89
SLIT3-204ENST00000518140 SLC25A35Q3KQZ1 300 aa20.64■□□□□ 0.89
SLIT3-204ENST00000518140 CEP78Q5JTW2 689 aa20.64■□□□□ 0.89
SLIT3-204ENST00000518140 C10orf128Q5T292 105 aa20.64■□□□□ 0.89
SLIT3-204ENST00000518140 PDSS1Q5T2R2 415 aa20.64■□□□□ 0.89
SLIT3-204ENST00000518140 DERL3Q96Q80 235 aa20.64■□□□□ 0.89
SLIT3-204ENST00000518140 SCNM1Q9BWG6 230 aa20.64■□□□□ 0.89
SLIT3-204ENST00000518140 HSPB2A8KAH6 182 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 RER1O15258 196 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 HSPB2Q16082 182 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 KCNMB1Q16558 191 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 ATAD3CQ5T2N8 411 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 PAMR1Q6UXH9 720 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 AAED1Q7RTV5 226 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 HAVCR2Q8TDQ0 301 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 SPRR3Q9UBC9 169 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 POLR1DQ9Y2S0 133 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 N6AMT1Q9Y5N5 214 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 MGAQ8IWI9 3026 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 TRAV1-2A0A0B4J238 106 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 DHHO43323 396 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 SCN1BQ07699 218 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 HSD17B12Q53GQ0 312 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 IDNKQ5T6J7 187 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 XKRXQ6PP77 449 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 CATSPERDQ86XM0 798 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 ZNF416Q9BWM5 594 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 ULBP2Q9BZM5 246 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 C1orf198Q9H425 327 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 LDAHQ9H6V9 325 aa20.63■□□□□ 0.89
SLIT3-204ENST00000518140 SPENQ96T58 3664 aaKnown RBP20.62■□□□□ 0.89
SLIT3-204ENST00000518140 TRBV5-5A0A0J9YX44 114 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 TMEM212A6NML5 194 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 H2BFMP0C1H6 154 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 SLC2A2P11168 524 aaPredicted RBP20.62■□□□□ 0.89
SLIT3-204ENST00000518140 SRMP19623 302 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 LINGO2Q7L985 606 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 TPRA1Q86W33 373 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 MEIOBQ8N635 442 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 FNDC9Q8TBE3 224 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 NABP1Q96AH0 204 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 SLC25A18Q9H1K4 315 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 ZDHHC11Q9H8X9 412 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 AK6Q9Y3D8 172 aaKnown RBP20.62■□□□□ 0.89
SLIT3-204ENST00000518140 A0A1W2PQ09 198 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 ARL6IP5O75915 188 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 AZGP1P25311 298 aaKnown RBP20.62■□□□□ 0.89
SLIT3-204ENST00000518140 DDOSTP39656 456 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 CCR9P51686 369 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 MADCAM1Q13477 382 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 Q499Y3 187 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 FAM131AQ6UXB0 335 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 AP3S1Q92572 193 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 COMMD4Q9H0A8 199 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 EXO5Q9H790 373 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 BRD7Q9NPI1 651 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 G6PC2Q9NQR9 355 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 R4GMQ9 66 aa20.62■□□□□ 0.89
SLIT3-204ENST00000518140 ACOT7O00154 380 aa20.61■□□□□ 0.89
SLIT3-204ENST00000518140 ZNHIT1O43257 154 aa20.61■□□□□ 0.89
SLIT3-204ENST00000518140 HPGDSO60760 199 aa20.61■□□□□ 0.89
SLIT3-204ENST00000518140 RAB3BP20337 219 aa20.61■□□□□ 0.89
SLIT3-204ENST00000518140 THBS2P35442 1172 aa20.61■□□□□ 0.89
SLIT3-204ENST00000518140 ASAH1Q13510 395 aa20.61■□□□□ 0.89
SLIT3-204ENST00000518140 SFXN4Q6P4A7 337 aa20.61■□□□□ 0.89
SLIT3-204ENST00000518140 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.61■□□□□ 0.89
SLIT3-204ENST00000518140 LRRC18Q8N456 261 aa20.61■□□□□ 0.89
SLIT3-204ENST00000518140 OR2AJ1Q8NGZ0 328 aa20.61■□□□□ 0.89
SLIT3-204ENST00000518140 INTS12Q96CB8 462 aaKnown RBP20.61■□□□□ 0.89
SLIT3-204ENST00000518140 GFI1Q99684 422 aa20.61■□□□□ 0.89
SLIT3-204ENST00000518140 RCE1Q9Y256 329 aa20.61■□□□□ 0.89
SLIT3-204ENST00000518140 APC2O95996 2303 aa20.61■□□□□ 0.89
SLIT3-204ENST00000518140 NCOA6Q14686 2063 aaPredicted RBP20.61■□□□□ 0.89
SLIT3-204ENST00000518140 CEP295Q9C0D2 2601 aa20.61■□□□□ 0.89
SLIT3-204ENST00000518140 TRGV5A0A0B4J1U4 118 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 SLC43A1O75387 559 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 ZNF254O75437 659 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 TRAPPC2P0DI81 140 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 TRAPPC2BP0DI82 140 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 ENDOGQ14249 297 aaKnown RBP20.6■□□□□ 0.89
SLIT3-204ENST00000518140 DEGS2Q6QHC5 323 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 GDPD1Q8N9F7 314 aa20.6■□□□□ 0.89
SLIT3-204ENST00000518140 PNPLA2Q96AD5 504 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms