RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 TRIM45Q9H8W5 580 aaPredicted RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.36□□□□□ -2.35
HPS3-205ENST00000478525 RHBDL2Q9NX52 303 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 IL37Q9NZH6 218 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 PCSK1NQ9UHG2 260 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 YARS2Q9Y2Z4 477 aaKnown RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 TMED5Q9Y3A6 229 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 U3KQV3 271 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 ICE1Q9Y2F5 2266 aa0.36□□□□□ -2.35
HPS3-205ENST00000478525 ZNF469Q96JG9 3925 aaPredicted RBP0.36□□□□□ -2.35
HPS3-205ENST00000478525 CR1P17927 2039 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 DOCK6Q96HP0 2047 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 IGLV10-54A0A075B6I4 117 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 TRAV19A0A0A6YYK7 116 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 SCGB2A1O75556 95 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 ATP5LO75964 103 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 SLC22A5O76082 557 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 CLDN9O95484 217 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 PAHP00439 452 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 IGLV7-43P04211 117 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 RAB3AP20336 220 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 DRD5P21918 477 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 SSTR5P35346 364 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 CHI3L1P36222 383 aaPredicted RBP0.35□□□□□ -2.35
HPS3-205ENST00000478525 ERFP50548 548 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 CCNA1P78396 465 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 IRX3P78415 501 aaPredicted RBP0.35□□□□□ -2.35
HPS3-205ENST00000478525 NUCB2P80303 420 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 PJVKQ0ZLH3 352 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 CDH17Q12864 832 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 C1orf61Q13536 156 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 HSP90AA5PQ58FG0 334 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 TCEAL5Q5H9L2 206 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 CCNJQ5T5M9 372 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 CPTPQ5TA50 214 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 DEFB119Q8N690 84 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 ZNF557Q8N988 423 aaPredicted RBP0.35□□□□□ -2.35
HPS3-205ENST00000478525 HSD17B11Q8NBQ5 300 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 LY6G5BQ8NDX9 201 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 CCDC110Q8TBZ0 833 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 TRMT10AQ8TBZ6 339 aaKnown RBP0.35□□□□□ -2.35
HPS3-205ENST00000478525 UBE2Q2Q8WVN8 375 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 RLN3Q8WXF3 142 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 PIBF1Q8WXW3 757 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 TCEAL3Q969E4 200 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 UBE2E3Q969T4 207 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 DCPSQ96C86 337 aaKnown RBP0.35□□□□□ -2.35
HPS3-205ENST00000478525 GALNT14Q96FL9 552 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 RNF145Q96MT1 663 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 ZFP3Q96NJ6 502 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 HSD17B10Q99714 261 aaKnown RBP0.35□□□□□ -2.35
HPS3-205ENST00000478525 SH3GL1Q99961 368 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 SEC22CQ9BRL7 303 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 KRT23Q9C075 422 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 RPF2Q9H7B2 306 aaKnown RBP0.35□□□□□ -2.35
HPS3-205ENST00000478525 NIPAL2Q9H841 368 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 EDA2RQ9HAV5 297 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 ETNK2Q9NVF9 386 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 HMGXB4Q9UGU5 601 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 KNSTRNQ9Y448 316 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 MAPK8IP3Q9UPT6 1336 aa0.35□□□□□ -2.35
HPS3-205ENST00000478525 KANK1Q14678 1352 aa0.34□□□□□ -2.35
HPS3-205ENST00000478525 A0A087WZY1 265 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 IGHV1-3A0A0C4DH29 117 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 IGHV7-4-1A0A0J9YVY3 117 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 CENPBD1B2RD01 187 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 BTN3A3O00478 584 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 PSCAO43653 123 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 PLIN3O60664 434 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 EIF3GO75821 320 aaKnown RBP eCLIP0.34□□□□□ -2.36
HPS3-205ENST00000478525 GATBO75879 557 aaKnown RBP0.34□□□□□ -2.36
HPS3-205ENST00000478525 SCO1O75880 301 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 SEMA3DO95025 777 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 TSPOAP1O95153 1857 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 SCELO95171 688 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 NDUFB10O96000 172 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 CYB5R3P00387 301 aaPredicted RBP0.34□□□□□ -2.36
HPS3-205ENST00000478525 HEXBP07686 556 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 HLA-DMAP28067 261 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 GNA11P29992 359 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 CCR1P32246 355 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 MAS1LP35410 378 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 BRCA1P38398 1863 aaKnown RBP0.34□□□□□ -2.36
HPS3-205ENST00000478525 PLXNA3P51805 1871 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 TAS2R31P59538 309 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 CRADDP78560 199 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 CDK16Q00536 496 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 ZNF92Q03936 586 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 PPIDQ08752 370 aaKnown RBP0.34□□□□□ -2.36
HPS3-205ENST00000478525 TWF1Q12792 350 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 TRDNQ13061 729 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 BTN1A1Q13410 526 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 TPBGQ13641 420 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 DGUOKQ16854 277 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 IMMTQ16891 758 aaKnown RBP0.34□□□□□ -2.36
HPS3-205ENST00000478525 TEX30Q5JUR7 227 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 AVPI1Q5T686 147 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 ANKRD22Q5VYY1 191 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 FBXW12Q6X9E4 464 aa0.34□□□□□ -2.36
HPS3-205ENST00000478525 MICAL3Q7RTP6 2002 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms