RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 FIBINQ8TAL6 211 aa-1.04□□□□□ -2.58
SNORA40-201ENST00000388090 CPNE4Q96A23 557 aaPredicted RBP-1.04□□□□□ -2.58
SNORA40-201ENST00000388090 MRGPRFQ96AM1 343 aa-1.04□□□□□ -2.58
SNORA40-201ENST00000388090 FAM3DQ96BQ1 224 aa-1.04□□□□□ -2.58
SNORA40-201ENST00000388090 MARVELD1Q9BSK0 173 aa-1.04□□□□□ -2.58
SNORA40-201ENST00000388090 ZNF160Q9HCG1 818 aa-1.04□□□□□ -2.58
SNORA40-201ENST00000388090 ANO10Q9NW15 660 aa-1.04□□□□□ -2.58
SNORA40-201ENST00000388090 DDX19BQ9UMR2 479 aa-1.04□□□□□ -2.58
SNORA40-201ENST00000388090 RASD1Q9Y272 281 aa-1.04□□□□□ -2.58
SNORA40-201ENST00000388090 ATP6V0A2Q9Y487 856 aa-1.04□□□□□ -2.58
SNORA40-201ENST00000388090 DIDO1Q9BTC0 2240 aaKnown RBP-1.04□□□□□ -2.58
SNORA40-201ENST00000388090 TECTAO75443 2155 aa-1.04□□□□□ -2.58
SNORA40-201ENST00000388090 DSTQ03001 7570 aaKnown RBP-1.04□□□□□ -2.58
SNORA40-201ENST00000388090 PFKFB2O60825 505 aa-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 MAS1LP35410 378 aa-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 KRT20P35900 424 aa-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 TPMTP51580 245 aa-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 CMC4P56277 68 aaPredicted RBP-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 CDH17Q12864 832 aa-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 KLHL38Q2WGJ6 581 aa-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 MRPL43Q8N983 215 aaKnown RBP-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 URGCPQ8TCY9 931 aa-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 NPY6RQ99463 290 aa-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 EDEM2Q9BV94 578 aa-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 NXF5Q9H1B4 397 aaKnown RBP-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 REEP4Q9H6H4 257 aa-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 ACTR8Q9H981 624 aa-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 CYP39A1Q9NYL5 469 aa-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 CFDP1Q9UEE9 299 aaPredicted RBP-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 HMGXB4Q9UGU5 601 aa-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 HOOK1Q9UJC3 728 aaKnown RBP-1.05□□□□□ -2.58
SNORA40-201ENST00000388090 A0A0B4J2A0 478 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 GGTLC3B5MD39 225 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 H3BRN7 92 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 PLIN3O60664 434 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 EIF1BO60739 113 aaKnown RBP-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 DKC1O60832 514 aaKnown RBP eCLIP-1.06□□□□□ -2.58not detected■■■■■ 29.5
SNORA40-201ENST00000388090 ZNF189O75820 626 aaPredicted RBP-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 APOA4P06727 396 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 TCN1P20061 433 aaPredicted RBP-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 RORAP35398 523 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 EIF1P41567 113 aaKnown RBP-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 OR1G1P47890 313 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 OGDHQ02218 1023 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 MXD4Q14582 209 aaPredicted RBP-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 OXA1LQ15070 435 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 TP53I3Q53FA7 332 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 LDLRAD2Q5SZI1 272 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 GORABQ5T7V8 394 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 LIN9Q5TKA1 542 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 SPECC1LQ69YQ0 1117 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 TMEM270Q6UE05 265 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 PEX26Q7Z412 305 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 CEP112Q8N8E3 955 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 B3GNT7Q8NFL0 401 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 MED8Q96G25 268 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 ZNF75AQ96N20 296 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 HSD17B10Q99714 261 aaKnown RBP-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 BAG1Q99933 345 aaPredicted RBP-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 HIGD2AQ9BW72 106 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 RPF2Q9H7B2 306 aaKnown RBP-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 METTL7AQ9H8H3 244 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 MRPL47Q9HD33 250 aaKnown RBP-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 AGPAT5Q9NUQ2 364 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 SHPKQ9UHJ6 478 aa-1.06□□□□□ -2.58
SNORA40-201ENST00000388090 TSPAN13O95857 204 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 PAHP00439 452 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 CXCL10P02778 98 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 GZMBP10144 247 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 RALAP11233 206 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 SCG2P13521 617 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 ZNF708P17019 499 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 HOXB8P17481 243 aaPredicted RBP-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 MAP3K8P41279 467 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 TDO2P48775 406 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 TGM4P49221 684 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 AP3M2P53677 418 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 KIAA1024LP59773 190 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 IRX3P78415 501 aaPredicted RBP-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 RBP5P82980 135 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 PLCXD2Q0VAA5 305 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 HES1Q14469 280 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 ZSCAN26Q16670 478 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 SOHLH1Q5JUK2 328 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 H3F3CQ6NXT2 135 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 CCDC89Q8N998 374 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 OR4K13Q8NH42 304 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 MYLPFQ96A32 169 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 DESI2Q9BSY9 194 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 CYSTM1Q9H1C7 97 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 DPH5Q9H2P9 285 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 RHBDL2Q9NX52 303 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 CSDC2Q9Y534 153 aaKnown RBP-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 U3KQK5 164 aa-1.07□□□□□ -2.58
SNORA40-201ENST00000388090 TRGV2A0A075B6R0 118 aa-1.08□□□□□ -2.58
SNORA40-201ENST00000388090 ARHGAP42A6NI28 874 aa-1.08□□□□□ -2.58
SNORA40-201ENST00000388090 GPR89AB7ZAQ6 455 aa-1.08□□□□□ -2.58
SNORA40-201ENST00000388090 PALMO75781 387 aa-1.08□□□□□ -2.58
SNORA40-201ENST00000388090 SLC22A5O76082 557 aa-1.08□□□□□ -2.58
SNORA40-201ENST00000388090 OXTP01178 125 aa-1.08□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms