RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 AEBP2Q6ZN18 517 aaPredicted RBP16.6■□□□□ 0.25
SNORA40-201ENST00000388090 CHIC1Q5VXU3 224 aa15.42■□□□□ 0.06
SNORA40-201ENST00000388090 SENP3Q9H4L4 574 aaPredicted RBP14.17□□□□□ -0.14
SNORA40-201ENST00000388090 PHF23Q9BUL5 403 aaPredicted RBP13.94□□□□□ -0.18
SNORA40-201ENST00000388090 FOXD1Q16676 465 aa13.29□□□□□ -0.28
SNORA40-201ENST00000388090 POTEDQ86YR6 584 aa13.02□□□□□ -0.33
SNORA40-201ENST00000388090 MSH5O43196 834 aa12.56□□□□□ -0.4
SNORA40-201ENST00000388090 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
SNORA40-201ENST00000388090 PPP6R1Q9UPN7 881 aa12.12□□□□□ -0.47
SNORA40-201ENST00000388090 ADRA2BP18089 450 aa12.03□□□□□ -0.48
SNORA40-201ENST00000388090 PLPPR3Q6T4P5 718 aa12.01□□□□□ -0.49
SNORA40-201ENST00000388090 MAPK8IP2Q13387 824 aaPredicted RBP11.19□□□□□ -0.62
SNORA40-201ENST00000388090 DMRT2Q9Y5R5 561 aa11.19□□□□□ -0.62
SNORA40-201ENST00000388090 CACNB1Q02641 598 aaPredicted RBP11.03□□□□□ -0.64
SNORA40-201ENST00000388090 SCAF1Q9H7N4 1312 aaKnown RBP10.95□□□□□ -0.66
SNORA40-201ENST00000388090 RNF39Q9H2S5 420 aa10.71□□□□□ -0.69
SNORA40-201ENST00000388090 DCAF8L1A6NGE4 600 aa10.69□□□□□ -0.7
SNORA40-201ENST00000388090 HOXD11P31277 338 aaPredicted RBP10.62□□□□□ -0.71
SNORA40-201ENST00000388090 C1QBPQ07021 282 aaKnown RBP10.51□□□□□ -0.73
SNORA40-201ENST00000388090 PPP4R3CPQ6ZMV5 832 aa10.49□□□□□ -0.73
SNORA40-201ENST00000388090 RNF216Q9NWF9 866 aaPredicted RBP10.4□□□□□ -0.74
SNORA40-201ENST00000388090 CNKSR2Q8WXI2 1034 aa10.38□□□□□ -0.75
SNORA40-201ENST00000388090 DNAJC5BQ9UF47 199 aa10.33□□□□□ -0.76
SNORA40-201ENST00000388090 POTEHQ6S545 545 aa10.1□□□□□ -0.79
SNORA40-201ENST00000388090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.06□□□□□ -0.8
SNORA40-201ENST00000388090 NCBP3Q53F19 620 aaKnown RBP9.91□□□□□ -0.82
SNORA40-201ENST00000388090 DSG3P32926 999 aa9.88□□□□□ -0.83
SNORA40-201ENST00000388090 U3KPZ7 1027 aaPredicted RBP9.86□□□□□ -0.83
SNORA40-201ENST00000388090 SPINK5Q9NQ38 1064 aaPredicted RBP9.84□□□□□ -0.83
SNORA40-201ENST00000388090 NPM3O75607 178 aaKnown RBP9.82□□□□□ -0.84
SNORA40-201ENST00000388090 CAPN15O75808 1086 aa9.79□□□□□ -0.84
SNORA40-201ENST00000388090 ABCB7O75027 752 aa9.55□□□□□ -0.88
SNORA40-201ENST00000388090 TRHP20396 242 aaPredicted RBP9.54□□□□□ -0.88
SNORA40-201ENST00000388090 SLC4A2P04920 1241 aa9.52□□□□□ -0.89
SNORA40-201ENST00000388090 ZNF219Q9P2Y4 722 aaPredicted RBP9.5□□□□□ -0.89
SNORA40-201ENST00000388090 APLP2Q06481 763 aa9.45□□□□□ -0.9
SNORA40-201ENST00000388090 CHRDL2Q6WN34 429 aa9.39□□□□□ -0.91
SNORA40-201ENST00000388090 RBM42Q9BTD8 480 aaKnown RBP9.39□□□□□ -0.91
SNORA40-201ENST00000388090 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.36□□□□□ -0.91
SNORA40-201ENST00000388090 HNRNPUL2Q1KMD3 747 aaKnown RBP9.36□□□□□ -0.91
SNORA40-201ENST00000388090 SAMD1Q6SPF0 538 aaPredicted RBP9.3□□□□□ -0.92
SNORA40-201ENST00000388090 SP7Q8TDD2 431 aaPredicted RBP9.27□□□□□ -0.93
SNORA40-201ENST00000388090 KCNA4P22459 653 aa9.26□□□□□ -0.93
SNORA40-201ENST00000388090 POLA2Q14181 598 aa9.21□□□□□ -0.94
SNORA40-201ENST00000388090 AKT1S1Q96B36 256 aa9.11□□□□□ -0.95
SNORA40-201ENST00000388090 PIP4P2Q8N4L2 257 aa9.08□□□□□ -0.96
SNORA40-201ENST00000388090 MYCNP04198 464 aaPredicted RBP9.06□□□□□ -0.96
SNORA40-201ENST00000388090 REM2Q8IYK8 340 aaPredicted RBP9.04□□□□□ -0.96
SNORA40-201ENST00000388090 HAX1O00165 279 aa9□□□□□ -0.97
SNORA40-201ENST00000388090 FXR2P51116 673 aaKnown RBP eCLIP8.97□□□□□ -0.97
SNORA40-201ENST00000388090 PITPNM1O00562 1244 aa8.95□□□□□ -0.98
SNORA40-201ENST00000388090 ATF5Q9Y2D1 282 aaPredicted RBP8.95□□□□□ -0.98
SNORA40-201ENST00000388090 ZBTB12Q9Y330 459 aaPredicted RBP8.94□□□□□ -0.98
SNORA40-201ENST00000388090 EVX2Q03828 476 aa8.93□□□□□ -0.98
SNORA40-201ENST00000388090 OSCARQ8IYS5 282 aa8.93□□□□□ -0.98
SNORA40-201ENST00000388090 FOXD4L1Q9NU39 408 aa8.75□□□□□ -1.01
SNORA40-201ENST00000388090 C19orf67A6NJJ6 358 aa8.7□□□□□ -1.02
SNORA40-201ENST00000388090 PRKAR2AP13861 404 aaKnown RBP8.69□□□□□ -1.02
SNORA40-201ENST00000388090 LHX8Q68G74 356 aa8.68□□□□□ -1.02
SNORA40-201ENST00000388090 GABBR2O75899 941 aa8.67□□□□□ -1.02
SNORA40-201ENST00000388090 SPDYE2BA6NHP3 402 aa8.66□□□□□ -1.02
SNORA40-201ENST00000388090 SPDYE6P0CI01 402 aa8.66□□□□□ -1.02
SNORA40-201ENST00000388090 SPDYE2Q495Y8 402 aa8.66□□□□□ -1.02
SNORA40-201ENST00000388090 SLC4A1APQ9BWU0 796 aaKnown RBP8.62□□□□□ -1.03
SNORA40-201ENST00000388090 SPDYE1Q8NFV5 336 aaPredicted RBP8.6□□□□□ -1.03
SNORA40-201ENST00000388090 CLEC11AQ9Y240 323 aa8.6□□□□□ -1.03
SNORA40-201ENST00000388090 ZBTB22O15209 634 aa8.54□□□□□ -1.04
SNORA40-201ENST00000388090 FBLN2P98095 1184 aa8.54□□□□□ -1.04
SNORA40-201ENST00000388090 SSUH2Q9Y2M2 353 aa8.53□□□□□ -1.04
SNORA40-201ENST00000388090 ATXN8OSP0DMR3 200 aa8.52□□□□□ -1.05
SNORA40-201ENST00000388090 CHADLQ6NUI6 762 aa8.52□□□□□ -1.05
SNORA40-201ENST00000388090 POTEIP0CG38 1075 aa8.51□□□□□ -1.05
SNORA40-201ENST00000388090 MKRN4PQ13434 485 aaPredicted RBP8.51□□□□□ -1.05
SNORA40-201ENST00000388090 ZNF692Q9BU19 519 aaPredicted RBP8.48□□□□□ -1.05
SNORA40-201ENST00000388090 PLSCR2Q9NRY7 297 aa8.46□□□□□ -1.06
SNORA40-201ENST00000388090 PRR29P0C7W0 189 aa8.4□□□□□ -1.06
SNORA40-201ENST00000388090 CD44P16070 742 aaKnown RBP8.39□□□□□ -1.07
SNORA40-201ENST00000388090 CLCN6P51797 869 aa8.35□□□□□ -1.07
SNORA40-201ENST00000388090 PABPN1Q86U42 306 aaKnown RBP eCLIP8.35□□□□□ -1.07
SNORA40-201ENST00000388090 FARP1Q9Y4F1 1045 aaPredicted RBP8.35□□□□□ -1.07
SNORA40-201ENST00000388090 DCBLD2Q96PD2 775 aa8.3□□□□□ -1.08
SNORA40-201ENST00000388090 ZNF579Q8NAF0 562 aaKnown RBP8.26□□□□□ -1.09
SNORA40-201ENST00000388090 OTUD5Q96G74 571 aa8.26□□□□□ -1.09
SNORA40-201ENST00000388090 POTEB2H3BUK9 544 aa8.22□□□□□ -1.09
SNORA40-201ENST00000388090 ZRANB1Q9UGI0 708 aa8.2□□□□□ -1.1
SNORA40-201ENST00000388090 POTEMA6NI47 508 aa8.19□□□□□ -1.1
SNORA40-201ENST00000388090 GALR2O43603 387 aaPredicted RBP8.19□□□□□ -1.1
SNORA40-201ENST00000388090 POTEGQ6S5H5 508 aa8.16□□□□□ -1.1
SNORA40-201ENST00000388090 CREBZFQ9NS37 354 aa8.14□□□□□ -1.11
SNORA40-201ENST00000388090 PELP1Q8IZL8 1130 aaKnown RBP8.1□□□□□ -1.11
SNORA40-201ENST00000388090 PHF12Q96QT6 1004 aa8.07□□□□□ -1.12
SNORA40-201ENST00000388090 PCDH10Q9P2E7 1040 aa8.07□□□□□ -1.12
SNORA40-201ENST00000388090 POTEJP0CG39 1038 aa8.05□□□□□ -1.12
SNORA40-201ENST00000388090 LCE2DQ5TA82 110 aaPredicted RBP8.03□□□□□ -1.12
SNORA40-201ENST00000388090 PAK3O75914 559 aaPredicted RBP8□□□□□ -1.13
SNORA40-201ENST00000388090 ASTLQ6HA08 431 aaPredicted RBP8□□□□□ -1.13
SNORA40-201ENST00000388090 STAG3Q9UJ98 1225 aa8□□□□□ -1.13
SNORA40-201ENST00000388090 METRNQ9UJH8 293 aa8□□□□□ -1.13
SNORA40-201ENST00000388090 ATMINO43313 823 aaPredicted RBP7.97□□□□□ -1.13
SNORA40-201ENST00000388090 MNX1P50219 401 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms