RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 GAD1Q04792 585 aa2.53□□□□□ -2
snR55snR55 UBX5Q06682 500 aa2.53□□□□□ -2
snR55snR55 MLH3Q12083 715 aa2.53□□□□□ -2
snR55snR55 PHO11P35842 467 aa2.52□□□□□ -2.01
snR55snR55 EMC3P36039 253 aa2.52□□□□□ -2.01
snR55snR55 PHO12P38693 467 aa2.52□□□□□ -2.01
snR55snR55 MUP3P38734 546 aa2.52□□□□□ -2.01
snR55snR55 ECM1P39715 212 aa2.52□□□□□ -2.01
snR55snR55 LTP1P40347 161 aa2.52□□□□□ -2.01
snR55snR55 NIT3P49954 291 aa2.52□□□□□ -2.01
snR55snR55 YGR283CP53336 341 aaPredicted RBP2.52□□□□□ -2.01
snR55snR55 TDA9Q04545 1251 aa2.52□□□□□ -2.01
snR55snR55 TDA5Q06417 326 aaKnown RBP2.52□□□□□ -2.01
snR55snR55 YBR182C-AQ8TGU6 64 aa2.52□□□□□ -2.01
snR55snR55 ERG11P10614 530 aa2.51□□□□□ -2.01
snR55snR55 PTP1P25044 335 aa2.51□□□□□ -2.01
snR55snR55 MVD1P32377 396 aaKnown RBP2.51□□□□□ -2.01
snR55snR55 SET5P38890 526 aaKnown RBP2.51□□□□□ -2.01
snR55snR55 NUP60P39705 539 aa2.51□□□□□ -2.01
snR55snR55 NET1P47035 1189 aa2.51□□□□□ -2.01
snR55snR55 ZIP2P53061 704 aa2.51□□□□□ -2.01
snR55snR55 ATG4P53867 494 aa2.51□□□□□ -2.01
snR55snR55 JIP5Q06214 492 aaPredicted RBP2.51□□□□□ -2.01
snR55snR55 PGK1P00560 416 aaKnown RBP2.5□□□□□ -2.01
snR55snR55 THR1P17423 357 aaKnown RBP2.5□□□□□ -2.01
snR55snR55 RPL8BP29453 256 aaKnown RBP2.5□□□□□ -2.01
snR55snR55 SET3P36124 751 aa2.5□□□□□ -2.01
snR55snR55 YHR112CP38716 378 aa2.5□□□□□ -2.01
snR55snR55 XBP1P40489 647 aa2.5□□□□□ -2.01
snR55snR55 UBP6P43593 499 aaKnown RBP2.5□□□□□ -2.01
snR55snR55 HXT16P47185 567 aa2.5□□□□□ -2.01
snR55snR55 MTR3P48240 250 aaPredicted RBP2.5□□□□□ -2.01
snR55snR55 ALD6P54115 500 aaKnown RBP2.5□□□□□ -2.01
snR55snR55 MPS1P54199 764 aa2.5□□□□□ -2.01
snR55snR55 GEP3Q08622 556 aa2.5□□□□□ -2.01
snR55snR55 HRP1Q99383 534 aaKnown RBP2.5□□□□□ -2.01
snR55snR55 ADE2P21264 571 aaKnown RBP2.49□□□□□ -2.01
snR55snR55 ERG6P25087 383 aaKnown RBP2.49□□□□□ -2.01
snR55snR55 RGT1P32862 1170 aa2.49□□□□□ -2.01
snR55snR55 SAP190P36123 1033 aa2.49□□□□□ -2.01
snR55snR55 VAC8P39968 578 aa2.49□□□□□ -2.01
snR55snR55 STB2P46679 850 aa2.49□□□□□ -2.01
snR55snR55 YLR149CQ99296 730 aa2.49□□□□□ -2.01
snR55snR55 NAP1P25293 417 aaKnown RBP2.48□□□□□ -2.01
snR55snR55 FUB1P25659 250 aa2.48□□□□□ -2.01
snR55snR55 CCR4P31384 837 aaKnown RBP2.48□□□□□ -2.01
snR55snR55 SPC29P33419 253 aa2.48□□□□□ -2.01
snR55snR55 TY4A-JP47023 414 aa2.48□□□□□ -2.01
snR55snR55 PRP31P49704 494 aaPredicted RBP2.48□□□□□ -2.01
snR55snR55 CTK1Q03957 528 aaKnown RBP2.48□□□□□ -2.01
snR55snR55 YDR338CQ05497 695 aa2.48□□□□□ -2.01
snR55snR55 EAF1Q06337 982 aa2.48□□□□□ -2.01
snR55snR55 USV1Q12132 391 aa2.48□□□□□ -2.01
snR55snR55 NUP1P20676 1076 aa2.47□□□□□ -2.01
snR55snR55 MBR1P23493 339 aa2.47□□□□□ -2.01
snR55snR55 APL2P36000 726 aaPredicted RBP2.47□□□□□ -2.01
snR55snR55 MIT1P40002 666 aa2.47□□□□□ -2.01
snR55snR55 GET2P40056 285 aa2.47□□□□□ -2.01
snR55snR55 ARG5,6Q01217 863 aa2.47□□□□□ -2.01
snR55snR55 SVF1Q05515 481 aa2.47□□□□□ -2.01
snR55snR55 REH1Q06709 432 aa2.47□□□□□ -2.01
snR55snR55 GMH1P36125 273 aa2.46□□□□□ -2.02
snR55snR55 YMC2P38087 329 aa2.46□□□□□ -2.02
snR55snR55 RLP7P40693 322 aaKnown RBP2.46□□□□□ -2.02
snR55snR55 ERP6P53198 216 aa2.46□□□□□ -2.02
snR55snR55 HFD1Q04458 532 aa2.46□□□□□ -2.02
snR55snR55 SLK19Q08581 821 aaKnown RBP2.46□□□□□ -2.02
snR55snR55 MET7Q08645 548 aa2.46□□□□□ -2.02
snR55snR55 DIF1O13577 133 aa2.45□□□□□ -2.02
snR55snR55 PHO5P00635 467 aa2.45□□□□□ -2.02
snR55snR55 STE12P13574 688 aa2.45□□□□□ -2.02
snR55snR55 APN1P22936 367 aa2.45□□□□□ -2.02
snR55snR55 GRX1P25373 110 aaKnown RBP2.45□□□□□ -2.02
snR55snR55 YMC1P32331 307 aa2.45□□□□□ -2.02
snR55snR55 SHR5P41912 237 aa2.45□□□□□ -2.02
snR55snR55 MEP2P41948 499 aa2.45□□□□□ -2.02
snR55snR55 YPL068CQ02749 293 aa2.45□□□□□ -2.02
snR55snR55 FMP30Q02883 468 aa2.45□□□□□ -2.02
snR55snR55 ATP25Q03153 612 aa2.45□□□□□ -2.02
snR55snR55 HMO1Q03973 246 aaKnown RBP2.45□□□□□ -2.02
snR55snR55 ZRT2Q12436 422 aa2.45□□□□□ -2.02
snR55snR55 SAT4P25333 603 aaKnown RBP2.44□□□□□ -2.02
snR55snR55 ARE1P25628 610 aa2.44□□□□□ -2.02
snR55snR55 SCT1P32784 759 aa2.44□□□□□ -2.02
snR55snR55 TRZ1P36159 838 aaPredicted RBP2.44□□□□□ -2.02
snR55snR55 TAX4P47030 604 aa2.44□□□□□ -2.02
snR55snR55 YBP2P53169 641 aa2.44□□□□□ -2.02
snR55snR55 TAF8Q03750 510 aa2.44□□□□□ -2.02
snR55snR55 YDR514CQ04408 483 aa2.44□□□□□ -2.02
snR55snR55 MCM21Q06675 368 aa2.44□□□□□ -2.02
snR55snR55 STE4P18851 423 aa2.43□□□□□ -2.02
snR55snR55 RPA135P22138 1203 aaKnown RBP2.43□□□□□ -2.02
snR55snR55 BET3P36149 193 aa2.43□□□□□ -2.02
snR55snR55 CRP1P38845 465 aaKnown RBP2.43□□□□□ -2.02
snR55snR55 ALG2P43636 503 aa2.43□□□□□ -2.02
snR55snR55 ZDS1P50111 915 aaKnown RBP2.43□□□□□ -2.02
snR55snR55 SSF2Q12153 453 aaPredicted RBP2.43□□□□□ -2.02
snR55snR55 ADE5,7P07244 802 aaKnown RBP2.42□□□□□ -2.02
snR55snR55 KCC4P25389 1037 aa2.42□□□□□ -2.02
snR55snR55 PER1P25625 357 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms