RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeastyeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR17bsnR17b RPA14P50106 137 aa5.08□□□□□ -1.6
snR17bsnR17b TEL2P53038 688 aa5.08□□□□□ -1.6
snR17bsnR17b DRN1P53255 507 aaKnown RBP5.08□□□□□ -1.6
snR17bsnR17b YGR273CP53329 174 aa5.08□□□□□ -1.6
snR17bsnR17b RPT4P53549 437 aaKnown RBP5.08□□□□□ -1.6
snR17bsnR17b NSG2P53898 299 aa5.08□□□□□ -1.6
snR17bsnR17b UBP3Q01477 912 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
snR17bsnR17b YKR005CQ02203 525 aa5.08□□□□□ -1.6
snR17bsnR17b IRC4Q03036 179 aa5.08□□□□□ -1.6
snR17bsnR17b HMO1Q03973 246 aaKnown RBP5.08□□□□□ -1.6
snR17bsnR17b AIM33Q04516 312 aa5.08□□□□□ -1.6
snR17bsnR17b RGA2Q06407 1009 aa5.08□□□□□ -1.6
snR17bsnR17b NSE1Q07913 336 aa5.08□□□□□ -1.6
snR17bsnR17b VHS3Q08438 674 aa5.08□□□□□ -1.6
snR17bsnR17b MSH5Q12175 901 aa5.08□□□□□ -1.6
snR17bsnR17b BUG1Q12191 341 aa5.08□□□□□ -1.6
snR17bsnR17b FAS2P19097 1887 aaKnown RBP5.07□□□□□ -1.6
snR17bsnR17b CMD1P06787 147 aaKnown RBP5.07□□□□□ -1.6
snR17bsnR17b YML002WP0CF17 737 aa5.07□□□□□ -1.6
snR17bsnR17b PFK1P16861 987 aaKnown RBP5.07□□□□□ -1.6
snR17bsnR17b DPB2P24482 689 aaPredicted RBP5.07□□□□□ -1.6
snR17bsnR17b KIP1P28742 1111 aa5.07□□□□□ -1.6
snR17bsnR17b MCM5P29496 775 aaKnown RBP5.07□□□□□ -1.6
snR17bsnR17b ATO2P32907 282 aa5.07□□□□□ -1.6
snR17bsnR17b MRP8P35719 219 aa5.07□□□□□ -1.6
snR17bsnR17b HES1P35843 434 aa5.07□□□□□ -1.6
snR17bsnR17b YKR075CP36155 307 aa5.07□□□□□ -1.6
snR17bsnR17b TRZ1P36159 838 aaPredicted RBP5.07□□□□□ -1.6
snR17bsnR17b PAM1P37304 830 aaKnown RBP5.07□□□□□ -1.6
snR17bsnR17b CCL1P37366 393 aa5.07□□□□□ -1.6
snR17bsnR17b NCL1P38205 684 aaKnown RBP5.07□□□□□ -1.6
snR17bsnR17b YHL008CP38750 627 aa5.07□□□□□ -1.6
snR17bsnR17b GAA1P39012 614 aa5.07□□□□□ -1.6
snR17bsnR17b NUP82P40368 713 aa5.07□□□□□ -1.6
snR17bsnR17b PFK26P40433 827 aaKnown RBP5.07□□□□□ -1.6
snR17bsnR17b ALA1P40825 983 aaKnown RBP5.07□□□□□ -1.6
snR17bsnR17b TFG1P41895 735 aaPredicted RBP5.07□□□□□ -1.6
snR17bsnR17b YFR006WP43590 535 aa5.07□□□□□ -1.6
snR17bsnR17b TAF1P46677 1066 aa5.07□□□□□ -1.6
snR17bsnR17b RNR4P49723 345 aaKnown RBP5.07□□□□□ -1.6
snR17bsnR17b UBP15P50101 1230 aa5.07□□□□□ -1.6
snR17bsnR17b YGR016WP53209 190 aa5.07□□□□□ -1.6
snR17bsnR17b FOL1P53848 824 aa5.07□□□□□ -1.6
snR17bsnR17b ESBP6P53918 673 aa5.07□□□□□ -1.6
snR17bsnR17b BUL2Q03758 920 aaKnown RBP5.07□□□□□ -1.6
snR17bsnR17b FMN1Q03778 218 aa5.07□□□□□ -1.6
snR17bsnR17b YDR179W-AQ03983 463 aa5.07□□□□□ -1.6
snR17bsnR17b SXM1Q04175 944 aaKnown RBP5.07□□□□□ -1.6
snR17bsnR17b YMR027WQ04371 470 aa5.07□□□□□ -1.6
snR17bsnR17b ENV9Q08651 330 aa5.07□□□□□ -1.6
snR17bsnR17b GET4Q12125 312 aa5.07□□□□□ -1.6
snR17bsnR17b TAF3Q12297 353 aa5.07□□□□□ -1.6
snR17bsnR17b IES3Q12345 250 aa5.07□□□□□ -1.6
snR17bsnR17b SUI3P09064 285 aaKnown RBP5.06□□□□□ -1.6
snR17bsnR17b SWI6P09959 803 aa5.06□□□□□ -1.6
snR17bsnR17b SNF3P10870 884 aa5.06□□□□□ -1.6
snR17bsnR17b SUP45P12385 437 aaKnown RBP5.06□□□□□ -1.6
snR17bsnR17b SEC63P14906 663 aa5.06□□□□□ -1.6
snR17bsnR17b NPP1P25353 742 aa5.06□□□□□ -1.6
snR17bsnR17b PHO87P25360 923 aa5.06□□□□□ -1.6
snR17bsnR17b HEM3P28789 327 aa5.06□□□□□ -1.6
snR17bsnR17b TPS2P31688 896 aaKnown RBP5.06□□□□□ -1.6
snR17bsnR17b DBF4P32325 704 aa5.06□□□□□ -1.6
snR17bsnR17b PEX2P32800 271 aa5.06□□□□□ -1.6
snR17bsnR17b YEL1P34225 687 aa5.06□□□□□ -1.6
snR17bsnR17b SET3P36124 751 aa5.06□□□□□ -1.6
snR17bsnR17b UBP13P38187 747 aa5.06□□□□□ -1.6
snR17bsnR17b TRM5P38793 499 aa5.06□□□□□ -1.6
snR17bsnR17b YMR134WP40207 237 aa5.06□□□□□ -1.6
snR17bsnR17b DPH1P40487 425 aaKnown RBP5.06□□□□□ -1.6
snR17bsnR17b ROG3P43602 733 aa5.06□□□□□ -1.6
snR17bsnR17b MIG2P53035 382 aa5.06□□□□□ -1.6
snR17bsnR17b ORM1P53224 222 aa5.06□□□□□ -1.6
snR17bsnR17b PGA2P53903 129 aa5.06□□□□□ -1.6
snR17bsnR17b DAK1P54838 584 aaKnown RBP5.06□□□□□ -1.6
snR17bsnR17b PTA1Q01329 785 aaPredicted RBP5.06□□□□□ -1.6
snR17bsnR17b MUB1Q03162 620 aa5.06□□□□□ -1.6
snR17bsnR17b YPL277CQ08989 487 aa5.06□□□□□ -1.6
snR17bsnR17b SGT2Q12118 346 aaKnown RBP5.06□□□□□ -1.6
snR17bsnR17b MDM20Q12387 796 aaKnown RBP5.06□□□□□ -1.6
snR17bsnR17b YRF1-3P0CX14 1859 aa5.05□□□□□ -1.6
snR17bsnR17b YRF1-7P0CX15 1859 aa5.05□□□□□ -1.6
snR17bsnR17b YRF1-6P53819 1859 aa5.05□□□□□ -1.6
snR17bsnR17b SEM1O94742 89 aa5.05□□□□□ -1.6
snR17bsnR17b PGK1P00560 416 aaKnown RBP5.05□□□□□ -1.6
snR17bsnR17b SNF1P06782 633 aaKnown RBP5.05□□□□□ -1.6
snR17bsnR17b MPH2P0CD99 609 aa5.05□□□□□ -1.6
snR17bsnR17b EXO70P19658 623 aa5.05□□□□□ -1.6
snR17bsnR17b MEF1P25039 761 aa5.05□□□□□ -1.6
snR17bsnR17b AAD3P25612 363 aa5.05□□□□□ -1.6
snR17bsnR17b SEC21P32074 935 aaKnown RBP5.05□□□□□ -1.6
snR17bsnR17b DGR2P32330 852 aa5.05□□□□□ -1.6
snR17bsnR17b MET4P32389 672 aa5.05□□□□□ -1.6
snR17bsnR17b SPT16P32558 1035 aaKnown RBP5.05□□□□□ -1.6
snR17bsnR17b RRN6P32786 894 aa5.05□□□□□ -1.6
snR17bsnR17b SEC6P32844 805 aa5.05□□□□□ -1.6
snR17bsnR17b RAD54P32863 898 aa5.05□□□□□ -1.6
snR17bsnR17b YKR015CP36111 568 aa5.05□□□□□ -1.6
snR17bsnR17b DBP7P36120 742 aaKnown RBP5.05□□□□□ -1.6
snR17bsnR17b FES1P38260 290 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms