RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W DPS1P04802 557 aaKnown RBP3.94□□□□□ -1.78
SWI1YPL016W RPS17BP14127 136 aaKnown RBP3.94□□□□□ -1.78
SWI1YPL016W CKB1P43639 278 aa3.94□□□□□ -1.78
SWI1YPL016W YJL055WP47044 245 aa3.94□□□□□ -1.78
SWI1YPL016W BFA1P47113 574 aa3.94□□□□□ -1.78
SWI1YPL016W YJR098CP47139 656 aa3.94□□□□□ -1.78
SWI1YPL016W YOR289WQ12012 251 aaPredicted RBP3.94□□□□□ -1.78
SWI1YPL016W RAM2P29703 316 aa3.93□□□□□ -1.78
SWI1YPL016W YKR075CP36155 307 aa3.93□□□□□ -1.78
SWI1YPL016W PTC2P39966 464 aaKnown RBP3.93□□□□□ -1.78
SWI1YPL016W BNA3P47039 444 aaKnown RBP3.93□□□□□ -1.78
SWI1YPL016W RPT6Q01939 405 aaKnown RBP3.93□□□□□ -1.78
SWI1YPL016W FUS2Q05670 677 aa3.93□□□□□ -1.78
SWI1YPL016W NOP6Q07623 225 aaKnown RBP3.93□□□□□ -1.78
SWI1YPL016W RSC58Q07979 502 aa3.93□□□□□ -1.78
SWI1YPL016W ATG29Q12092 213 aa3.93□□□□□ -1.78
SWI1YPL016W YBR298C-AQ8TGK4 73 aa3.93□□□□□ -1.78
SWI1YPL016W SNA3P14359 133 aa3.93□□□□□ -1.78
SWI1YPL016W REC107P21651 314 aa3.93□□□□□ -1.78
SWI1YPL016W TPS2P31688 896 aaKnown RBP3.93□□□□□ -1.78
SWI1YPL016W MGM1P32266 881 aa3.93□□□□□ -1.78
SWI1YPL016W YKL091CP33324 310 aaKnown RBP3.93□□□□□ -1.78
SWI1YPL016W BMH2P34730 273 aaKnown RBP3.93□□□□□ -1.78
SWI1YPL016W TOS1P38288 455 aa3.93□□□□□ -1.78
SWI1YPL016W YHR219WP38900 624 aa3.93□□□□□ -1.78
SWI1YPL016W DAK2P43550 591 aa3.93□□□□□ -1.78
SWI1YPL016W VPS75P53853 264 aa3.93□□□□□ -1.78
SWI1YPL016W ALF1P53904 254 aa3.93□□□□□ -1.78
SWI1YPL016W RPN9Q04062 393 aaKnown RBP3.93□□□□□ -1.78
SWI1YPL016W GYP5Q12344 894 aa3.93□□□□□ -1.78
SWI1YPL016W SEM1O94742 89 aa3.93□□□□□ -1.78
SWI1YPL016W RNR2P09938 399 aaKnown RBP3.93□□□□□ -1.78
SWI1YPL016W VMA1P17255 1071 aaKnown RBP3.93□□□□□ -1.78
SWI1YPL016W YEL043WP32618 956 aa3.93□□□□□ -1.78
SWI1YPL016W CLG1P35190 452 aa3.93□□□□□ -1.78
SWI1YPL016W RPC37P36121 282 aa3.93□□□□□ -1.78
SWI1YPL016W IFA38P38286 347 aa3.93□□□□□ -1.78
SWI1YPL016W YBP1P38315 674 aa3.93□□□□□ -1.78
SWI1YPL016W MEF2P39677 819 aa3.93□□□□□ -1.78
SWI1YPL016W BTN2P53286 410 aa3.93□□□□□ -1.78
SWI1YPL016W EIS1Q05050 843 aaKnown RBP3.93□□□□□ -1.78
SWI1YPL016W DIB1Q06819 143 aaPredicted RBP3.93□□□□□ -1.78
SWI1YPL016W NTO1Q12311 748 aa3.93□□□□□ -1.78
SWI1YPL016W KSS1P14681 368 aa3.92□□□□□ -1.78
SWI1YPL016W VMA2P16140 517 aaKnown RBP3.92□□□□□ -1.78
SWI1YPL016W PHO84P25297 587 aaKnown RBP3.92□□□□□ -1.78
SWI1YPL016W VRP1P37370 817 aa3.92□□□□□ -1.78
SWI1YPL016W ILM1P47155 203 aa3.92□□□□□ -1.78
SWI1YPL016W MCM6P53091 1017 aaKnown RBP3.92□□□□□ -1.78
SWI1YPL016W GCN5Q03330 439 aa3.92□□□□□ -1.78
SWI1YPL016W POB3Q04636 552 aaKnown RBP3.92□□□□□ -1.78
SWI1YPL016W TOS4Q06266 489 aa3.92□□□□□ -1.78
SWI1YPL016W NOB1Q08444 459 aaKnown RBP3.92□□□□□ -1.78
SWI1YPL016W RIM20Q12033 661 aa3.92□□□□□ -1.78
SWI1YPL016W TIP41Q12199 356 aa3.92□□□□□ -1.78
SWI1YPL016W NOT5Q12514 560 aaPredicted RBP3.92□□□□□ -1.78
SWI1YPL016W CDC19P00549 500 aaKnown RBP3.92□□□□□ -1.78
SWI1YPL016W MPH2P0CD99 609 aa3.92□□□□□ -1.78
SWI1YPL016W CBP3P21560 335 aa3.92□□□□□ -1.78
SWI1YPL016W DPB2P24482 689 aaPredicted RBP3.92□□□□□ -1.78
SWI1YPL016W GBP2P25555 427 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
SWI1YPL016W PAT1P25644 796 aaKnown RBP3.92□□□□□ -1.78
SWI1YPL016W UBC6P33296 250 aaPredicted RBP3.92□□□□□ -1.78
SWI1YPL016W PDX3P38075 228 aaKnown RBP3.92□□□□□ -1.78
SWI1YPL016W FMP10P40098 244 aa3.92□□□□□ -1.78
SWI1YPL016W SBE2P42223 864 aaKnown RBP3.92□□□□□ -1.78
SWI1YPL016W MAK10Q02197 733 aa3.92□□□□□ -1.78
SWI1YPL016W EBS1Q03466 884 aaKnown RBP3.92□□□□□ -1.78
SWI1YPL016W RPL19AP0CX82 189 aaKnown RBP3.92□□□□□ -1.78
SWI1YPL016W RPL19BP0CX83 189 aaPredicted RBP3.92□□□□□ -1.78
SWI1YPL016W MRPL32P25348 183 aa3.92□□□□□ -1.78
SWI1YPL016W KRE2P27809 442 aa3.92□□□□□ -1.78
SWI1YPL016W KIP1P28742 1111 aa3.92□□□□□ -1.78
SWI1YPL016W BCK2P33306 851 aa3.92□□□□□ -1.78
SWI1YPL016W SEG2P34250 1132 aa3.92□□□□□ -1.78
SWI1YPL016W OAF3P36023 863 aa3.92□□□□□ -1.78
SWI1YPL016W MCD4P36051 919 aa3.92□□□□□ -1.78
SWI1YPL016W YHL050CP38721 697 aa3.92□□□□□ -1.78
SWI1YPL016W GID8P40208 455 aa3.92□□□□□ -1.78
SWI1YPL016W SEC27P41811 889 aaKnown RBP3.92□□□□□ -1.78
SWI1YPL016W GSM1P42950 618 aa3.92□□□□□ -1.78
SWI1YPL016W REH1Q06709 432 aa3.92□□□□□ -1.78
SWI1YPL016W DIS3Q08162 1001 aaKnown RBP3.92□□□□□ -1.78
SWI1YPL016W GPN2Q08726 347 aaPredicted RBP3.92□□□□□ -1.78
SWI1YPL016W RKM1Q08961 583 aaPredicted RBP3.92□□□□□ -1.78
SWI1YPL016W CEX1Q12453 761 aa3.92□□□□□ -1.78
SWI1YPL016W YEL077CQ3E7X8 1277 aa3.92□□□□□ -1.78
SWI1YPL016W SSB1P11484 613 aaKnown RBP3.91□□□□□ -1.78
SWI1YPL016W RAP1P11938 827 aa3.91□□□□□ -1.78
SWI1YPL016W TPM1P17536 199 aaKnown RBP3.91□□□□□ -1.78
SWI1YPL016W SFA1P32771 386 aa3.91□□□□□ -1.78
SWI1YPL016W BEM3P32873 1128 aa3.91□□□□□ -1.78
SWI1YPL016W IMP3P32899 183 aaPredicted RBP3.91□□□□□ -1.78
SWI1YPL016W YKL050CP35736 922 aa3.91□□□□□ -1.78
SWI1YPL016W FCY21P40039 528 aa3.91□□□□□ -1.78
SWI1YPL016W SSB2P40150 613 aaKnown RBP3.91□□□□□ -1.78
SWI1YPL016W LYS14P40971 790 aa3.91□□□□□ -1.78
SWI1YPL016W NUP84P52891 726 aa3.91□□□□□ -1.78
SWI1YPL016W HXT15P54854 567 aa3.91□□□□□ -1.78
SWI1YPL016W INA17Q02888 182 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 73.7 ms