RNA–Protein interactions for RNA: YOR329C

SCD5, Transcript of Protein required for normal actin organization and endocytosis, yeastyeast

Gene SCD5, Length 2,619 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD5YOR329C IXR1P33417 597 aa2.5□□□□□ -2.01
SCD5YOR329C MFT1P33441 392 aaKnown RBP2.5□□□□□ -2.01
SCD5YOR329C PIN4P34217 668 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
SCD5YOR329C MUD2P36084 527 aaKnown RBP2.5□□□□□ -2.01
SCD5YOR329C DBP7P36120 742 aaKnown RBP2.5□□□□□ -2.01
SCD5YOR329C TRZ1P36159 838 aaPredicted RBP2.5□□□□□ -2.01
SCD5YOR329C JNM1P36224 373 aa2.5□□□□□ -2.01
SCD5YOR329C PGM2P37012 569 aaKnown RBP2.5□□□□□ -2.01
SCD5YOR329C REI1P38344 393 aaPredicted RBP2.5□□□□□ -2.01
SCD5YOR329C CIN4P39110 191 aa2.5□□□□□ -2.01
SCD5YOR329C ALD5P40047 520 aaKnown RBP2.5□□□□□ -2.01
SCD5YOR329C LCB2P40970 561 aa2.5□□□□□ -2.01
SCD5YOR329C HLJ1P48353 224 aa2.5□□□□□ -2.01
SCD5YOR329C YNL058CP53947 316 aa2.5□□□□□ -2.01
SCD5YOR329C UME1Q03010 460 aa2.5□□□□□ -2.01
SCD5YOR329C MTG1Q03151 367 aaPredicted RBP2.5□□□□□ -2.01
SCD5YOR329C SLD5Q03406 294 aa2.5□□□□□ -2.01
SCD5YOR329C YDL057WQ07379 328 aa2.5□□□□□ -2.01
SCD5YOR329C IWR1Q07532 353 aaPredicted RBP2.5□□□□□ -2.01
SCD5YOR329C YDL206WQ12424 762 aa2.5□□□□□ -2.01
SCD5YOR329C ZRT2Q12436 422 aa2.5□□□□□ -2.01
SCD5YOR329C WHI2P12611 486 aa2.49□□□□□ -2.01
SCD5YOR329C YPK1P12688 680 aaKnown RBP2.49□□□□□ -2.01
SCD5YOR329C POX1P13711 748 aa2.49□□□□□ -2.01
SCD5YOR329C SPO12P17123 173 aa2.49□□□□□ -2.01
SCD5YOR329C RAD57P25301 460 aa2.49□□□□□ -2.01
SCD5YOR329C FUB1P25659 250 aa2.49□□□□□ -2.01
SCD5YOR329C GAR1P28007 205 aaKnown RBP2.49□□□□□ -2.01
SCD5YOR329C KIP2P28743 706 aa2.49□□□□□ -2.01
SCD5YOR329C YME1P32795 747 aa2.49□□□□□ -2.01
SCD5YOR329C SMY2P32909 740 aaKnown RBP2.49□□□□□ -2.01
SCD5YOR329C SHM1P37292 490 aaPredicted RBP2.49□□□□□ -2.01
SCD5YOR329C SHE3P38272 425 aaKnown RBP2.49□□□□□ -2.01
SCD5YOR329C RGD1P38339 666 aa2.49□□□□□ -2.01
SCD5YOR329C YHR054CP38780 354 aa2.49□□□□□ -2.01
SCD5YOR329C UBP5P39944 805 aa2.49□□□□□ -2.01
SCD5YOR329C IES1P43579 692 aa2.49□□□□□ -2.01
SCD5YOR329C ASN1P49089 572 aaKnown RBP2.49□□□□□ -2.01
SCD5YOR329C TAM41P53230 385 aa2.49□□□□□ -2.01
SCD5YOR329C YGR111WP53265 400 aa2.49□□□□□ -2.01
SCD5YOR329C LSC2P53312 427 aa2.49□□□□□ -2.01
SCD5YOR329C ATG23Q06671 453 aa2.49□□□□□ -2.01
SCD5YOR329C NOC3Q07896 663 aaPredicted RBP2.49□□□□□ -2.01
SCD5YOR329C APL4Q12028 832 aa2.49□□□□□ -2.01
SCD5YOR329C MCM16Q12262 181 aa2.49□□□□□ -2.01
SCD5YOR329C SUT2Q12286 268 aa2.49□□□□□ -2.01
SCD5YOR329C YOL098CQ12496 1037 aa2.49□□□□□ -2.01
SCD5YOR329C TRP2P00899 507 aaKnown RBP2.49□□□□□ -2.01
SCD5YOR329C TOM70P07213 617 aaKnown RBP2.49□□□□□ -2.01
SCD5YOR329C AMS1P22855 1083 aa2.49□□□□□ -2.01
SCD5YOR329C SCJ1P25303 377 aa2.49□□□□□ -2.01
SCD5YOR329C TRK2P28584 889 aa2.49□□□□□ -2.01
SCD5YOR329C CYS3P31373 394 aaKnown RBP2.49□□□□□ -2.01
SCD5YOR329C IRE1P32361 1115 aa2.49□□□□□ -2.01
SCD5YOR329C TMT1P32643 299 aa2.49□□□□□ -2.01
SCD5YOR329C ABD1P32783 436 aaPredicted RBP2.49□□□□□ -2.01
SCD5YOR329C CSG2P35206 410 aa2.49□□□□□ -2.01
SCD5YOR329C SPP381P38282 291 aaPredicted RBP2.49□□□□□ -2.01
SCD5YOR329C DYS1P38791 387 aa2.49□□□□□ -2.01
SCD5YOR329C YMR124WP39523 943 aaKnown RBP2.49□□□□□ -2.01
SCD5YOR329C CWC22P53333 577 aaKnown RBP2.49□□□□□ -2.01
SCD5YOR329C DIP5P53388 608 aa2.49□□□□□ -2.01
SCD5YOR329C BNI4P53858 892 aa2.49□□□□□ -2.01
SCD5YOR329C YNL146WP53906 100 aa2.49□□□□□ -2.01
SCD5YOR329C MSC2Q03455 724 aa2.49□□□□□ -2.01
SCD5YOR329C SKY1Q03656 742 aa2.49□□□□□ -2.01
SCD5YOR329C SOV1Q04748 898 aa2.49□□□□□ -2.01
SCD5YOR329C DAP1Q12091 152 aa2.49□□□□□ -2.01
SCD5YOR329C PCD1Q12524 340 aa2.49□□□□□ -2.01
SCD5YOR329C RTP1Q12751 981 aa2.49□□□□□ -2.01
SCD5YOR329C DED1P06634 604 aaKnown RBP2.48□□□□□ -2.01
SCD5YOR329C TUB3P09734 445 aaKnown RBP2.48□□□□□ -2.01
SCD5YOR329C SFL1P20134 766 aa2.48□□□□□ -2.01
SCD5YOR329C DAL7P21826 554 aa2.48□□□□□ -2.01
SCD5YOR329C KIN82P25341 720 aa2.48□□□□□ -2.01
SCD5YOR329C CDC48P25694 835 aaKnown RBP2.48□□□□□ -2.01
SCD5YOR329C DBF4P32325 704 aa2.48□□□□□ -2.01
SCD5YOR329C MET4P32389 672 aa2.48□□□□□ -2.01
SCD5YOR329C MNR2P35724 969 aa2.48□□□□□ -2.01
SCD5YOR329C GRS1P38088 690 aaKnown RBP2.48□□□□□ -2.01
SCD5YOR329C PCH2P38126 564 aa2.48□□□□□ -2.01
SCD5YOR329C PCM1P38628 557 aaKnown RBP2.48□□□□□ -2.01
SCD5YOR329C PHO86P46956 311 aa2.48□□□□□ -2.01
SCD5YOR329C YJR054WP47114 497 aa2.48□□□□□ -2.01
SCD5YOR329C VPS70P47161 811 aa2.48□□□□□ -2.01
SCD5YOR329C ALT2P52892 507 aa2.48□□□□□ -2.01
SCD5YOR329C PCL10P53124 433 aa2.48□□□□□ -2.01
SCD5YOR329C ARK1P53974 638 aa2.48□□□□□ -2.01
SCD5YOR329C TIF35Q04067 274 aaKnown RBP2.48□□□□□ -2.01
SCD5YOR329C UTP14Q04500 899 aaKnown RBP2.48□□□□□ -2.01
SCD5YOR329C ECI1Q05871 280 aa2.48□□□□□ -2.01
SCD5YOR329C STE23Q06010 1027 aa2.48□□□□□ -2.01
SCD5YOR329C DUS4Q06063 367 aa2.48□□□□□ -2.01
SCD5YOR329C CWC2Q12046 339 aaPredicted RBP2.48□□□□□ -2.01
SCD5YOR329C RUD3Q12234 484 aaKnown RBP2.48□□□□□ -2.01
SCD5YOR329C YOR131CQ12486 218 aa2.48□□□□□ -2.01
SCD5YOR329C AI5_BETAQ9ZZX0 354 aa2.48□□□□□ -2.01
SCD5YOR329C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01 RIP-Chip
SCD5YOR329C ADH4P10127 382 aa2.48□□□□□ -2.01
SCD5YOR329C ADE2P21264 571 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms