RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W MTR3P48240 250 aaPredicted RBP3.88□□□□□ -1.79
SRL1YOR247W RNR4P49723 345 aaKnown RBP3.88□□□□□ -1.79
SRL1YOR247W UBX4P54730 416 aa3.88□□□□□ -1.79
SRL1YOR247W MLC2Q06580 163 aa3.88□□□□□ -1.79
SRL1YOR247W PEX15Q08215 383 aa3.88□□□□□ -1.79
SRL1YOR247W HFI1Q12060 488 aa3.88□□□□□ -1.79
SRL1YOR247W RRP6Q12149 733 aaKnown RBP3.88□□□□□ -1.79
SRL1YOR247W YLR149CQ99296 730 aa3.88□□□□□ -1.79
SRL1YOR247W Q0142Q9ZZW4 58 aa3.88□□□□□ -1.79
SRL1YOR247W GAL1P04385 528 aa3.87□□□□□ -1.79
SRL1YOR247W GAL10P04397 699 aa3.87□□□□□ -1.79
SRL1YOR247W PFK1P16861 987 aaKnown RBP3.87□□□□□ -1.79
SRL1YOR247W HCA4P20448 770 aaKnown RBP3.87□□□□□ -1.79
SRL1YOR247W TRX2P22803 104 aaKnown RBP3.87□□□□□ -1.79
SRL1YOR247W SED4P25365 1065 aa3.87□□□□□ -1.79
SRL1YOR247W SEC65P29478 273 aa3.87□□□□□ -1.79
SRL1YOR247W DAL3P32459 195 aa3.87□□□□□ -1.79
SRL1YOR247W YKU70P32807 602 aa3.87□□□□□ -1.79
SRL1YOR247W SWE1P32944 819 aa3.87□□□□□ -1.79
SRL1YOR247W SEG2P34250 1132 aa3.87□□□□□ -1.79
SRL1YOR247W LRG1P35688 1017 aa3.87□□□□□ -1.79
SRL1YOR247W YHR078WP38799 552 aa3.87□□□□□ -1.79
SRL1YOR247W CTF8P38877 133 aa3.87□□□□□ -1.79
SRL1YOR247W HXT6P39003 570 aaKnown RBP3.87□□□□□ -1.79
SRL1YOR247W HXT7P39004 570 aa3.87□□□□□ -1.79
SRL1YOR247W SDP1P40479 209 aa3.87□□□□□ -1.79
SRL1YOR247W YBP2P53169 641 aa3.87□□□□□ -1.79
SRL1YOR247W YGR021WP53212 290 aa3.87□□□□□ -1.79
SRL1YOR247W ECM16Q04217 1267 aaKnown RBP3.87□□□□□ -1.79
SRL1YOR247W PGI1P12709 554 aaKnown RBP3.86□□□□□ -1.79
SRL1YOR247W KCC4P25389 1037 aa3.86□□□□□ -1.79
SRL1YOR247W OAF3P36023 863 aa3.86□□□□□ -1.79
SRL1YOR247W FUI1P38196 639 aa3.86□□□□□ -1.79
SRL1YOR247W MIP6P38760 659 aaKnown RBP3.86□□□□□ -1.79
SRL1YOR247W SSZ1P38788 538 aaKnown RBP3.86□□□□□ -1.79
SRL1YOR247W YJR039WP47107 1121 aa3.86□□□□□ -1.79
SRL1YOR247W HOL1P53389 586 aa3.86□□□□□ -1.79
SRL1YOR247W SNO2P53823 222 aa3.86□□□□□ -1.79
SRL1YOR247W BUD21Q08492 214 aaPredicted RBP3.86□□□□□ -1.79
SRL1YOR247W DCS2Q12123 353 aa3.86□□□□□ -1.79
SRL1YOR247W RPS21AP0C0V8 87 aaKnown RBP3.85□□□□□ -1.79
SRL1YOR247W GAS1P22146 559 aaKnown RBP3.85□□□□□ -1.79
SRL1YOR247W MRS6P32864 603 aaKnown RBP3.85□□□□□ -1.79
SRL1YOR247W SAK1P38990 1142 aa3.85□□□□□ -1.79
SRL1YOR247W RSC8P43609 557 aaKnown RBP3.85□□□□□ -1.79
SRL1YOR247W MET12P46151 657 aa3.85□□□□□ -1.79
SRL1YOR247W YMR210WQ03649 449 aa3.85□□□□□ -1.79
SRL1YOR247W SGD1Q06132 899 aa3.85□□□□□ -1.79
SRL1YOR247W TPO1Q07824 586 aa3.85□□□□□ -1.79
SRL1YOR247W SWM1Q12379 170 aa3.85□□□□□ -1.79
SRL1YOR247W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SRL1YOR247W RPS21BQ3E754 87 aaKnown RBP3.85□□□□□ -1.79
SRL1YOR247W HIS5P07172 385 aa3.84□□□□□ -1.79
SRL1YOR247W APN2P38207 520 aa3.84□□□□□ -1.79
SRL1YOR247W HIS6P40545 261 aa3.84□□□□□ -1.79
SRL1YOR247W URM1P40554 99 aaPredicted RBP3.84□□□□□ -1.79
SRL1YOR247W ENP2P48234 707 aaKnown RBP3.84□□□□□ -1.79
SRL1YOR247W MRPL22P53881 309 aa3.84□□□□□ -1.79
SRL1YOR247W PKH1Q03407 766 aa3.84□□□□□ -1.79
SRL1YOR247W ADY3Q07732 790 aa3.84□□□□□ -1.79
SRL1YOR247W PSR2Q07949 397 aa3.84□□□□□ -1.79
SRL1YOR247W PIF1P07271 859 aa3.83□□□□□ -1.8
SRL1YOR247W SWI6P09959 803 aa3.83□□□□□ -1.8
SRL1YOR247W PHO81P17442 1178 aa3.83□□□□□ -1.8
SRL1YOR247W APT2P36973 181 aa3.83□□□□□ -1.8
SRL1YOR247W AKL1P38080 1108 aaKnown RBP3.83□□□□□ -1.8
SRL1YOR247W ETP1P38748 585 aaKnown RBP3.83□□□□□ -1.8
SRL1YOR247W LAM1P38851 1228 aa3.83□□□□□ -1.8
SRL1YOR247W YHR202WP38887 602 aa3.83□□□□□ -1.8
SRL1YOR247W UBP5P39944 805 aa3.83□□□□□ -1.8
SRL1YOR247W SET2P46995 733 aaKnown RBP3.83□□□□□ -1.8
SRL1YOR247W GTF1P53260 183 aaPredicted RBP3.83□□□□□ -1.8
SRL1YOR247W BRE5P53741 515 aaKnown RBP3.83□□□□□ -1.8
SRL1YOR247W CNM67P53865 581 aaKnown RBP3.83□□□□□ -1.8
SRL1YOR247W ROT1Q03691 256 aa3.83□□□□□ -1.8
SRL1YOR247W UPC2Q12151 913 aa3.83□□□□□ -1.8
SRL1YOR247W RNQ1P25367 405 aa3.82□□□□□ -1.8
SRL1YOR247W DGR2P32330 852 aa3.82□□□□□ -1.8
SRL1YOR247W SDS22P36047 338 aa3.82□□□□□ -1.8
SRL1YOR247W FAT1P38225 669 aa3.82□□□□□ -1.8
SRL1YOR247W YBR259WP38338 688 aa3.82□□□□□ -1.8
SRL1YOR247W SRP68P38687 599 aaKnown RBP3.82□□□□□ -1.8
SRL1YOR247W YHL041WP38730 149 aa3.82□□□□□ -1.8
SRL1YOR247W BEM4P39011 633 aa3.82□□□□□ -1.8
SRL1YOR247W SAW1P39735 261 aa3.82□□□□□ -1.8
SRL1YOR247W IES5P40060 125 aa3.82□□□□□ -1.8
SRL1YOR247W VPS27P40343 622 aaKnown RBP3.82□□□□□ -1.8
SRL1YOR247W VHR1P40522 640 aa3.82□□□□□ -1.8
SRL1YOR247W NOP15P53927 220 aaPredicted RBP3.82□□□□□ -1.8
SRL1YOR247W ARP4P80428 489 aa3.82□□□□□ -1.8
SRL1YOR247W MUS81Q04149 632 aaPredicted RBP3.82□□□□□ -1.8
SRL1YOR247W YLR407WQ06070 228 aa3.82□□□□□ -1.8
SRL1YOR247W RXT3Q07458 294 aa3.82□□□□□ -1.8
SRL1YOR247W YDL121CQ07541 149 aa3.82□□□□□ -1.8
SRL1YOR247W WHI4Q07655 649 aaKnown RBP3.82□□□□□ -1.8
SRL1YOR247W GPB1Q08886 897 aa3.82□□□□□ -1.8
SRL1YOR247W HOP1P20050 605 aa3.81□□□□□ -1.8
SRL1YOR247W SER1P33330 395 aaKnown RBP3.81□□□□□ -1.8
SRL1YOR247W TSA1P34760 196 aaKnown RBP3.81□□□□□ -1.8
SRL1YOR247W RRP8P38961 392 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms