RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C LIF1P53150 421 aa7.84□□□□□ -1.15
RUP1YOR138C NOG2P53742 486 aaKnown RBP7.84□□□□□ -1.15
RUP1YOR138C ALD6P54115 500 aaKnown RBP7.84□□□□□ -1.15
RUP1YOR138C RPL22BP56628 122 aaKnown RBP7.84□□□□□ -1.15
RUP1YOR138C UFO1Q04511 668 aa7.84□□□□□ -1.15
RUP1YOR138C YDR222WQ04925 415 aa7.84□□□□□ -1.15
RUP1YOR138C DON1Q05610 365 aa7.84□□□□□ -1.15
RUP1YOR138C IME1P21190 360 aa7.83□□□□□ -1.16
RUP1YOR138C REC107P21651 314 aa7.83□□□□□ -1.16
RUP1YOR138C MGT1P26188 188 aa7.83□□□□□ -1.16
RUP1YOR138C GYP6P32806 458 aa7.83□□□□□ -1.16
RUP1YOR138C PIN4P34217 668 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
RUP1YOR138C STV1P37296 890 aa7.83□□□□□ -1.16
RUP1YOR138C POP4P38336 279 aa7.83□□□□□ -1.16
RUP1YOR138C FIS1P40515 155 aa7.83□□□□□ -1.16
RUP1YOR138C VPS53P47061 822 aa7.83□□□□□ -1.16
RUP1YOR138C VPS70P47161 811 aa7.83□□□□□ -1.16
RUP1YOR138C YNL040WP53960 456 aaPredicted RBP7.83□□□□□ -1.16
RUP1YOR138C TBF1Q02457 562 aa7.83□□□□□ -1.16
RUP1YOR138C RGA2Q06407 1009 aa7.83□□□□□ -1.16
RUP1YOR138C CUR1Q06469 252 aa7.83□□□□□ -1.16
RUP1YOR138C VHS3Q08438 674 aa7.83□□□□□ -1.16
RUP1YOR138C RRD2Q12461 358 aa7.83□□□□□ -1.16
RUP1YOR138C PHO88P38264 188 aaPredicted RBP7.83□□□□□ -1.16
RUP1YOR138C KEL1P38853 1164 aaKnown RBP7.83□□□□□ -1.16
RUP1YOR138C REV7P38927 245 aa7.83□□□□□ -1.16
RUP1YOR138C ASG1P40467 964 aa7.83□□□□□ -1.16
RUP1YOR138C SOL4P53315 255 aa7.83□□□□□ -1.16
RUP1YOR138C COG6P53959 839 aa7.83□□□□□ -1.16
RUP1YOR138C RPA49Q01080 415 aaPredicted RBP7.83□□□□□ -1.16
RUP1YOR138C DUS4Q06063 367 aa7.83□□□□□ -1.16
RUP1YOR138C NOC3Q07896 663 aaPredicted RBP7.83□□□□□ -1.16
RUP1YOR138C TCP1P12612 559 aaKnown RBP7.82□□□□□ -1.16
RUP1YOR138C CLB4P24871 460 aa7.82□□□□□ -1.16
RUP1YOR138C MRE11P32829 692 aa7.82□□□□□ -1.16
RUP1YOR138C CBF5P33322 483 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
RUP1YOR138C YIL001WP40560 513 aa7.82□□□□□ -1.16
RUP1YOR138C MKT1P40850 830 aaKnown RBP7.82□□□□□ -1.16
RUP1YOR138C EAF6P47128 113 aa7.82□□□□□ -1.16
RUP1YOR138C HSH155P49955 971 aaKnown RBP7.82□□□□□ -1.16
RUP1YOR138C INP52P50942 1183 aa7.82□□□□□ -1.16
RUP1YOR138C YML6P51998 286 aa7.82□□□□□ -1.16
RUP1YOR138C TAM41P53230 385 aa7.82□□□□□ -1.16
RUP1YOR138C DOS2P54858 310 aa7.82□□□□□ -1.16
RUP1YOR138C BET4Q00618 327 aa7.82□□□□□ -1.16
RUP1YOR138C TRM44Q02648 567 aaKnown RBP7.82□□□□□ -1.16
RUP1YOR138C YMR027WQ04371 470 aa7.82□□□□□ -1.16
RUP1YOR138C PHM6Q05637 104 aa7.82□□□□□ -1.16
RUP1YOR138C PMS1P14242 873 aa7.81□□□□□ -1.16
RUP1YOR138C HEM15P16622 393 aa7.81□□□□□ -1.16
RUP1YOR138C MLS1P30952 554 aa7.81□□□□□ -1.16
RUP1YOR138C PAM1P37304 830 aaKnown RBP7.81□□□□□ -1.16
RUP1YOR138C YBR032WP38223 100 aa7.81□□□□□ -1.16
RUP1YOR138C UTP7P40055 554 aaKnown RBP7.81□□□□□ -1.16
RUP1YOR138C ALA1P40825 983 aaKnown RBP7.81□□□□□ -1.16
RUP1YOR138C AXL1P40851 1208 aa7.81□□□□□ -1.16
RUP1YOR138C AVT1P47082 602 aa7.81□□□□□ -1.16
RUP1YOR138C RSM26P47141 266 aa7.81□□□□□ -1.16
RUP1YOR138C CTR1P49573 406 aa7.81□□□□□ -1.16
RUP1YOR138C LGE1Q02796 332 aaKnown RBP7.81□□□□□ -1.16
RUP1YOR138C ATP25Q03153 612 aa7.81□□□□□ -1.16
RUP1YOR138C CRF1Q04930 467 aa7.81□□□□□ -1.16
RUP1YOR138C ERG12P07277 443 aa7.81□□□□□ -1.16
RUP1YOR138C YML002WP0CF17 737 aa7.81□□□□□ -1.16
RUP1YOR138C SAM1P10659 382 aaKnown RBP7.81□□□□□ -1.16
RUP1YOR138C RAD18P10862 487 aa7.81□□□□□ -1.16
RUP1YOR138C MRPS28P21771 286 aa7.81□□□□□ -1.16
RUP1YOR138C SCJ1P25303 377 aa7.81□□□□□ -1.16
RUP1YOR138C RPC19P28000 142 aaKnown RBP7.81□□□□□ -1.16
RUP1YOR138C TOA1P32773 286 aa7.81□□□□□ -1.16
RUP1YOR138C HSM3P38348 480 aa7.81□□□□□ -1.16
RUP1YOR138C LIN1P38852 340 aaPredicted RBP7.81□□□□□ -1.16
RUP1YOR138C CPR7P47103 393 aa7.81□□□□□ -1.16
RUP1YOR138C GTB1Q04924 702 aa7.81□□□□□ -1.16
RUP1YOR138C CDC53Q12018 815 aaKnown RBP7.81□□□□□ -1.16
RUP1YOR138C AEP2P22136 580 aa7.8□□□□□ -1.16
RUP1YOR138C TPS2P31688 896 aaKnown RBP7.8□□□□□ -1.16
RUP1YOR138C TRM2P33753 639 aa7.8□□□□□ -1.16
RUP1YOR138C SEG2P34250 1132 aa7.8□□□□□ -1.16
RUP1YOR138C CBR1P38626 284 aaKnown RBP7.8□□□□□ -1.16
RUP1YOR138C STN1P38960 494 aa7.8□□□□□ -1.16
RUP1YOR138C OAF1P39720 1047 aaPredicted RBP7.8□□□□□ -1.16
RUP1YOR138C TAF6P53040 516 aa7.8□□□□□ -1.16
RUP1YOR138C CUS1Q02554 436 aaPredicted RBP7.8□□□□□ -1.16
RUP1YOR138C MDM38Q08179 573 aa7.8□□□□□ -1.16
RUP1YOR138C YOR059CQ08448 450 aaKnown RBP7.8□□□□□ -1.16
RUP1YOR138C NKP1Q12493 238 aa7.8□□□□□ -1.16
RUP1YOR138C ZUO1P32527 433 aaKnown RBP7.79□□□□□ -1.16
RUP1YOR138C CSG2P35206 410 aa7.79□□□□□ -1.16
RUP1YOR138C DUG2P38149 878 aa7.79□□□□□ -1.16
RUP1YOR138C AIM21P40563 679 aa7.79□□□□□ -1.16
RUP1YOR138C TFG1P41895 735 aaPredicted RBP7.79□□□□□ -1.16
RUP1YOR138C RGD2P43556 714 aa7.79□□□□□ -1.16
RUP1YOR138C PCL10P53124 433 aa7.79□□□□□ -1.16
RUP1YOR138C DRN1P53255 507 aaKnown RBP7.79□□□□□ -1.16
RUP1YOR138C VMA1P17255 1071 aaKnown RBP7.79□□□□□ -1.16
RUP1YOR138C AAD3P25612 363 aa7.79□□□□□ -1.16
RUP1YOR138C SPC97P38863 823 aa7.79□□□□□ -1.16
RUP1YOR138C ACA1P39970 489 aa7.79□□□□□ -1.16
RUP1YOR138C SBE2P42223 864 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms