RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C TRZ1P36159 838 aaPredicted RBP3.91□□□□□ -1.78
HRD1YOL013C NDE1P40215 560 aa3.91□□□□□ -1.78
HRD1YOL013C UBP6P43593 499 aaKnown RBP3.91□□□□□ -1.78
HRD1YOL013C BNA1P47096 177 aa3.91□□□□□ -1.78
HRD1YOL013C EXG2P52911 562 aa3.91□□□□□ -1.78
HRD1YOL013C NCS6P53088 359 aa3.91□□□□□ -1.78
HRD1YOL013C PUS9Q12069 462 aa3.91□□□□□ -1.78
HRD1YOL013C YPR071WQ12346 211 aa3.91□□□□□ -1.78
HRD1YOL013C NPC2Q12408 173 aa3.91□□□□□ -1.78
HRD1YOL013C SRD1P09007 221 aa3.9□□□□□ -1.78
HRD1YOL013C PCL2P25693 308 aa3.9□□□□□ -1.78
HRD1YOL013C PRP19P32523 503 aaKnown RBP3.9□□□□□ -1.78
HRD1YOL013C YHL041WP38730 149 aa3.9□□□□□ -1.78
HRD1YOL013C MSE1P48525 536 aa3.9□□□□□ -1.78
HRD1YOL013C WHI4Q07655 649 aaKnown RBP3.9□□□□□ -1.78
HRD1YOL013C GUP2Q08929 609 aa3.9□□□□□ -1.78
HRD1YOL013C INH1P01097 85 aa3.9□□□□□ -1.79
HRD1YOL013C PFK1P16861 987 aaKnown RBP3.9□□□□□ -1.79
HRD1YOL013C RFA1P22336 621 aaKnown RBP3.9□□□□□ -1.79
HRD1YOL013C GFD2P25370 566 aaKnown RBP3.9□□□□□ -1.79
HRD1YOL013C KCC4P25389 1037 aa3.9□□□□□ -1.79
HRD1YOL013C REC104P33323 182 aa3.9□□□□□ -1.79
HRD1YOL013C STE13P33894 931 aa3.9□□□□□ -1.79
HRD1YOL013C DEF1P35732 738 aaKnown RBP3.9□□□□□ -1.79
HRD1YOL013C MNN4P36044 1178 aa3.9□□□□□ -1.79
HRD1YOL013C ERT1P38140 529 aa3.9□□□□□ -1.79
HRD1YOL013C NIT2P47016 307 aa3.9□□□□□ -1.79
HRD1YOL013C ENB1Q08299 606 aa3.9□□□□□ -1.79
HRD1YOL013C RRP6Q12149 733 aaKnown RBP3.9□□□□□ -1.79
HRD1YOL013C UPC2Q12151 913 aa3.9□□□□□ -1.79
HRD1YOL013C PHR1P05066 565 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
HRD1YOL013C SFL1P20134 766 aa3.89□□□□□ -1.79
HRD1YOL013C SED4P25365 1065 aa3.89□□□□□ -1.79
HRD1YOL013C MCM10P32354 571 aa3.89□□□□□ -1.79
HRD1YOL013C BLI1P35727 113 aa3.89□□□□□ -1.79
HRD1YOL013C OAF1P39720 1047 aaPredicted RBP3.89□□□□□ -1.79
HRD1YOL013C GPP2P40106 250 aaKnown RBP3.89□□□□□ -1.79
HRD1YOL013C TOK1P40310 691 aa3.89□□□□□ -1.79
HRD1YOL013C HIS6P40545 261 aa3.89□□□□□ -1.79
HRD1YOL013C ERR3P42222 437 aa3.89□□□□□ -1.79
HRD1YOL013C BUL2Q03758 920 aaKnown RBP3.89□□□□□ -1.79
HRD1YOL013C MLC2Q06580 163 aa3.89□□□□□ -1.79
HRD1YOL013C SSP2Q08646 371 aa3.89□□□□□ -1.79
HRD1YOL013C OPI1P21957 404 aa3.88□□□□□ -1.79
HRD1YOL013C GSY1P23337 708 aa3.88□□□□□ -1.79
HRD1YOL013C PET10P36139 283 aa3.88□□□□□ -1.79
HRD1YOL013C MNT3P40549 630 aa3.88□□□□□ -1.79
HRD1YOL013C SNP1Q00916 300 aaPredicted RBP3.88□□□□□ -1.79
HRD1YOL013C REH1Q06709 432 aa3.88□□□□□ -1.79
HRD1YOL013C AIM39Q08223 395 aa3.88□□□□□ -1.79
HRD1YOL013C YDR056CQ12025 205 aa3.88□□□□□ -1.79
HRD1YOL013C HSC82P15108 705 aaKnown RBP3.87□□□□□ -1.79
HRD1YOL013C AEP2P22136 580 aa3.87□□□□□ -1.79
HRD1YOL013C KAR4P25583 335 aa3.87□□□□□ -1.79
HRD1YOL013C PTH2P34222 208 aa3.87□□□□□ -1.79
HRD1YOL013C APL2P36000 726 aaPredicted RBP3.87□□□□□ -1.79
HRD1YOL013C RIM4P38741 713 aa3.87□□□□□ -1.79
HRD1YOL013C DUG1P43616 481 aaKnown RBP3.87□□□□□ -1.79
HRD1YOL013C ALG2P43636 503 aa3.87□□□□□ -1.79
HRD1YOL013C NPY1P53164 384 aa3.87□□□□□ -1.79
HRD1YOL013C SUN4P53616 420 aa3.87□□□□□ -1.79
HRD1YOL013C DAL5P15365 543 aa3.87□□□□□ -1.79
HRD1YOL013C CAD1P24813 409 aaKnown RBP3.87□□□□□ -1.79
HRD1YOL013C TYE7P33122 291 aaPredicted RBP3.87□□□□□ -1.79
HRD1YOL013C MSS4P38994 779 aa3.87□□□□□ -1.79
HRD1YOL013C SAP185P40856 1058 aa3.87□□□□□ -1.79
HRD1YOL013C AIM14P53109 570 aa3.87□□□□□ -1.79
HRD1YOL013C SSL1Q04673 461 aaPredicted RBP3.87□□□□□ -1.79
HRD1YOL013C PHM6Q05637 104 aa3.87□□□□□ -1.79
HRD1YOL013C MSS18P08593 268 aa3.86□□□□□ -1.79
HRD1YOL013C HRR25P29295 494 aaKnown RBP3.86□□□□□ -1.79
HRD1YOL013C HEM12P32347 362 aaPredicted RBP3.86□□□□□ -1.79
HRD1YOL013C STE14P32584 239 aa3.86□□□□□ -1.79
HRD1YOL013C SPC29P33419 253 aa3.86□□□□□ -1.79
HRD1YOL013C YKL133CP36066 463 aa3.86□□□□□ -1.79
HRD1YOL013C PCM1P38628 557 aaKnown RBP3.86□□□□□ -1.79
HRD1YOL013C CKB2P38930 258 aa3.86□□□□□ -1.79
HRD1YOL013C ESL1P40456 1118 aa3.86□□□□□ -1.79
HRD1YOL013C YIL108WP40483 696 aaKnown RBP3.86□□□□□ -1.79
HRD1YOL013C CEP3P40969 608 aa3.86□□□□□ -1.79
HRD1YOL013C GYP8P43570 497 aa3.86□□□□□ -1.79
HRD1YOL013C GUD1Q07729 489 aa3.86□□□□□ -1.79
HRD1YOL013C PSR2Q07949 397 aa3.86□□□□□ -1.79
HRD1YOL013C YTM1Q12024 460 aaPredicted RBP3.86□□□□□ -1.79
HRD1YOL013C RTP1Q12751 981 aa3.86□□□□□ -1.79
HRD1YOL013C CDC31P06704 161 aaKnown RBP3.85□□□□□ -1.79
HRD1YOL013C FBP1P09201 348 aa3.85□□□□□ -1.79
HRD1YOL013C BEM3P32873 1128 aa3.85□□□□□ -1.79
HRD1YOL013C YKR011CQ02209 353 aa3.85□□□□□ -1.79
HRD1YOL013C YDR338CQ05497 695 aa3.85□□□□□ -1.79
HRD1YOL013C HOM3P10869 527 aa3.84□□□□□ -1.79
HRD1YOL013C HMG1P12683 1054 aa3.84□□□□□ -1.79
HRD1YOL013C RPD3P32561 433 aa3.84□□□□□ -1.79
HRD1YOL013C RPS0AP32905 252 aaKnown RBP3.84□□□□□ -1.79
HRD1YOL013C SER1P33330 395 aaKnown RBP3.84□□□□□ -1.79
HRD1YOL013C JNM1P36224 373 aa3.84□□□□□ -1.79
HRD1YOL013C BIT2P38346 545 aa3.84□□□□□ -1.79
HRD1YOL013C ACA1P39970 489 aa3.84□□□□□ -1.79
HRD1YOL013C SDP1P40479 209 aa3.84□□□□□ -1.79
HRD1YOL013C QRI7P43122 407 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms