RNA–Protein interactions for RNA: YNL042W

BOP3, Transcript of Protein of unknown function, yeast

Gene BOP3, Length 1,191 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BOP3	YNL042W	CLA4	P48562	842 aa		11.98	□□□□□ -0.49
BOP3	YNL042W	TAF6	P53040	516 aa		11.98	□□□□□ -0.49
BOP3	YNL042W	YNL040W	P53960	456 aa	Predicted RBP	11.98	□□□□□ -0.49
BOP3	YNL042W	YMR027W	Q04371	470 aa		11.98	□□□□□ -0.49
BOP3	YNL042W	ERV41	Q04651	352 aa		11.98	□□□□□ -0.49
BOP3	YNL042W	WHI4	Q07655	649 aa	Known RBP	11.98	□□□□□ -0.49
BOP3	YNL042W	OSW1	Q08692	278 aa		11.98	□□□□□ -0.49
BOP3	YNL042W	ERG12	P07277	443 aa		11.97	□□□□□ -0.49
BOP3	YNL042W	ICL1	P28240	557 aa	Predicted RBP	11.97	□□□□□ -0.49
BOP3	YNL042W	TOA1	P32773	286 aa		11.97	□□□□□ -0.49
BOP3	YNL042W	PMC1	P38929	1173 aa	Predicted RBP	11.97	□□□□□ -0.49
BOP3	YNL042W	UBP6	P43593	499 aa	Known RBP	11.97	□□□□□ -0.49
BOP3	YNL042W	LIF1	P53150	421 aa		11.97	□□□□□ -0.49
BOP3	YNL042W	COG6	P53959	839 aa		11.97	□□□□□ -0.49
BOP3	YNL042W	CUS1	Q02554	436 aa	Predicted RBP	11.97	□□□□□ -0.49
BOP3	YNL042W	GTB1	Q04924	702 aa		11.97	□□□□□ -0.49
BOP3	YNL042W	YDR222W	Q04925	415 aa		11.97	□□□□□ -0.49
BOP3	YNL042W	CRF1	Q04930	467 aa		11.97	□□□□□ -0.49
BOP3	YNL042W	TUB2	P02557	457 aa	Known RBP	11.96	□□□□□ -0.49
BOP3	YNL042W	SFL1	P20134	766 aa		11.96	□□□□□ -0.49
BOP3	YNL042W	EFB1	P32471	206 aa	Known RBP	11.96	□□□□□ -0.49
BOP3	YNL042W	TFC3	P34111	1160 aa		11.96	□□□□□ -0.49
BOP3	YNL042W	UBP11	P36026	717 aa		11.96	□□□□□ -0.49
BOP3	YNL042W	YBR032W	P38223	100 aa		11.96	□□□□□ -0.49
BOP3	YNL042W	SIP5	P40210	489 aa	Known RBP	11.96	□□□□□ -0.49
BOP3	YNL042W	ASG1	P40467	964 aa		11.96	□□□□□ -0.49
BOP3	YNL042W	TDA5	Q06417	326 aa	Known RBP	11.96	□□□□□ -0.49
BOP3	YNL042W	REC107	P21651	314 aa		11.95	□□□□□ -0.5
BOP3	YNL042W	ATG19	P35193	415 aa		11.95	□□□□□ -0.5
BOP3	YNL042W	SPC97	P38863	823 aa		11.95	□□□□□ -0.5
BOP3	YNL042W	MTC3	P53077	123 aa		11.95	□□□□□ -0.5
BOP3	YNL042W	UFO1	Q04511	668 aa		11.95	□□□□□ -0.5
BOP3	YNL042W	MDM38	Q08179	573 aa		11.95	□□□□□ -0.5
BOP3	YNL042W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	11.94	□□□□□ -0.5	not detected
BOP3	YNL042W	CMD1	P06787	147 aa	Known RBP	11.94	□□□□□ -0.5
BOP3	YNL042W	DAL2	P25335	343 aa		11.94	□□□□□ -0.5
BOP3	YNL042W	SET3	P36124	751 aa		11.94	□□□□□ -0.5
BOP3	YNL042W	ERP5	P38819	212 aa		11.94	□□□□□ -0.5
BOP3	YNL042W	INP52	P50942	1183 aa		11.94	□□□□□ -0.5
BOP3	YNL042W	YML6	P51998	286 aa		11.94	□□□□□ -0.5
BOP3	YNL042W	HFD1	Q04458	532 aa		11.94	□□□□□ -0.5
BOP3	YNL042W	CDC53	Q12018	815 aa	Known RBP	11.94	□□□□□ -0.5
BOP3	YNL042W	ADE3	P07245	946 aa	Known RBP	11.93	□□□□□ -0.5
BOP3	YNL042W	SIN4	P32259	974 aa		11.93	□□□□□ -0.5
BOP3	YNL042W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	11.93	□□□□□ -0.5	not detected
BOP3	YNL042W	VHR2	P40041	505 aa		11.93	□□□□□ -0.5
BOP3	YNL042W	DAS1	P47005	663 aa		11.93	□□□□□ -0.5
BOP3	YNL042W	MSH6	Q03834	1242 aa		11.93	□□□□□ -0.5
BOP3	YNL042W	CRD1	Q07560	283 aa		11.93	□□□□□ -0.5
BOP3	YNL042W	YPT6	Q99260	215 aa		11.93	□□□□□ -0.5
BOP3	YNL042W	RPS3	P05750	240 aa	Known RBP	11.92	□□□□□ -0.5
BOP3	YNL042W	TUB3	P09734	445 aa	Known RBP	11.92	□□□□□ -0.5
BOP3	YNL042W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	11.92	□□□□□ -0.5	not detected
BOP3	YNL042W	SCJ1	P25303	377 aa		11.92	□□□□□ -0.5
BOP3	YNL042W	KAR4	P25583	335 aa		11.92	□□□□□ -0.5
BOP3	YNL042W	CSG2	P35206	410 aa		11.92	□□□□□ -0.5
BOP3	YNL042W	PHO88	P38264	188 aa	Predicted RBP	11.92	□□□□□ -0.5
BOP3	YNL042W	LIN1	P38852	340 aa	Predicted RBP	11.92	□□□□□ -0.5
BOP3	YNL042W	UTP7	P40055	554 aa	Known RBP	11.92	□□□□□ -0.5
BOP3	YNL042W	RGD2	P43556	714 aa		11.92	□□□□□ -0.5
BOP3	YNL042W	PCL10	P53124	433 aa		11.92	□□□□□ -0.5
BOP3	YNL042W	TAM41	P53230	385 aa		11.92	□□□□□ -0.5
BOP3	YNL042W	NOG2	P53742	486 aa	Known RBP	11.92	□□□□□ -0.5
BOP3	YNL042W	KTR5	P53966	522 aa	Predicted RBP	11.92	□□□□□ -0.5
BOP3	YNL042W	RPA49	Q01080	415 aa	Predicted RBP	11.92	□□□□□ -0.5
BOP3	YNL042W	LGE1	Q02796	332 aa	Known RBP	11.92	□□□□□ -0.5
BOP3	YNL042W	ABP140	Q08641	628 aa	Known RBP	11.92	□□□□□ -0.5
BOP3	YNL042W	RRD2	Q12461	358 aa		11.92	□□□□□ -0.5
BOP3	YNL042W	VMA1	P17255	1071 aa	Known RBP	11.91	□□□□□ -0.5
BOP3	YNL042W	AEP2	P22136	580 aa		11.91	□□□□□ -0.5
BOP3	YNL042W	MGT1	P26188	188 aa		11.91	□□□□□ -0.5
BOP3	YNL042W	TPS2	P31688	896 aa	Known RBP	11.91	□□□□□ -0.5
BOP3	YNL042W	MRX3	P38172	270 aa		11.91	□□□□□ -0.5
BOP3	YNL042W	YBL086C	P38177	466 aa		11.91	□□□□□ -0.5
BOP3	YNL042W	RFC3	P38629	340 aa		11.91	□□□□□ -0.5
BOP3	YNL042W	HOS4	P40480	1083 aa		11.91	□□□□□ -0.5
BOP3	YNL042W	ALA1	P40825	983 aa	Known RBP	11.91	□□□□□ -0.5
BOP3	YNL042W	PHO86	P46956	311 aa		11.91	□□□□□ -0.5
BOP3	YNL042W	UBP2	Q01476	1272 aa		11.91	□□□□□ -0.5
BOP3	YNL042W	IVY1	Q04934	453 aa		11.91	□□□□□ -0.5
BOP3	YNL042W	RGA2	Q06407	1009 aa		11.91	□□□□□ -0.5
BOP3	YNL042W	OCA6	Q12454	224 aa		11.91	□□□□□ -0.5
BOP3	YNL042W	RAD18	P10862	487 aa		11.9	□□□□□ -0.5
BOP3	YNL042W	RPC19	P28000	142 aa	Known RBP	11.9	□□□□□ -0.5
BOP3	YNL042W	OXP1	P28273	1286 aa		11.9	□□□□□ -0.5
BOP3	YNL042W	CBF2	P32504	956 aa		11.9	□□□□□ -0.5
BOP3	YNL042W	COY1	P34237	679 aa		11.9	□□□□□ -0.5
BOP3	YNL042W	PCA1	P38360	1216 aa		11.9	□□□□□ -0.5
BOP3	YNL042W	ERC1	P38767	581 aa		11.9	□□□□□ -0.5
BOP3	YNL042W	KEL1	P38853	1164 aa	Known RBP	11.9	□□□□□ -0.5
BOP3	YNL042W	GVP36	P40531	326 aa	Known RBP	11.9	□□□□□ -0.5
BOP3	YNL042W	CPR7	P47103	393 aa		11.9	□□□□□ -0.5
BOP3	YNL042W	UBX4	P54730	416 aa		11.9	□□□□□ -0.5
BOP3	YNL042W	BET4	Q00618	327 aa		11.9	□□□□□ -0.5
BOP3	YNL042W	CEF1	Q03654	590 aa	Predicted RBP	11.9	□□□□□ -0.5
BOP3	YNL042W	SVF1	Q05515	481 aa		11.9	□□□□□ -0.5
BOP3	YNL042W	YLR326W	Q06170	240 aa	Known RBP	11.9	□□□□□ -0.5
BOP3	YNL042W	KEX2	P13134	814 aa		11.89	□□□□□ -0.51
BOP3	YNL042W	ABD1	P32783	436 aa	Predicted RBP	11.89	□□□□□ -0.51
BOP3	YNL042W	SEG2	P34250	1132 aa		11.89	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms