RNA–Protein interactions for RNA: YLR246W

ERF2, Transcript of Subunit of a palmitoyltransferase, yeast

Gene ERF2, Length 1,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ERF2	YLR246W	ABP140	Q08641	628 aa	Known RBP	11.72	□□□□□ -0.53
ERF2	YLR246W	SGT2	Q12118	346 aa	Known RBP	11.72	□□□□□ -0.53
ERF2	YLR246W	ATG11	Q12527	1178 aa		11.72	□□□□□ -0.53
ERF2	YLR246W	YBL111C	Q3E7Y5	667 aa		11.72	□□□□□ -0.53
ERF2	YLR246W	SPT5	P27692	1063 aa	Known RBP	11.71	□□□□□ -0.53
ERF2	YLR246W	DBF4	P32325	704 aa		11.71	□□□□□ -0.53
ERF2	YLR246W	UBC6	P33296	250 aa	Predicted RBP	11.71	□□□□□ -0.53
ERF2	YLR246W	TRM2	P33753	639 aa		11.71	□□□□□ -0.53
ERF2	YLR246W	NCL1	P38205	684 aa	Known RBP	11.71	□□□□□ -0.53
ERF2	YLR246W	SAK1	P38990	1142 aa		11.71	□□□□□ -0.53
ERF2	YLR246W	LCP5	P40079	357 aa	Predicted RBP	11.71	□□□□□ -0.53
ERF2	YLR246W	MVP1	P40959	511 aa	Known RBP	11.71	□□□□□ -0.53
ERF2	YLR246W	MIC19	P43594	170 aa		11.71	□□□□□ -0.53
ERF2	YLR246W	BRO1	P48582	844 aa		11.71	□□□□□ -0.53
ERF2	YLR246W	ATG16	Q03818	150 aa		11.71	□□□□□ -0.53
ERF2	YLR246W	ERV41	Q04651	352 aa		11.71	□□□□□ -0.53
ERF2	YLR246W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	11.71	□□□□□ -0.53	RIP-Chip
ERF2	YLR246W	RIO1	Q12196	484 aa	Known RBP	11.71	□□□□□ -0.53
ERF2	YLR246W	ZPS1	Q12512	249 aa		11.71	□□□□□ -0.53
ERF2	YLR246W	ASP3-2	P0CX77	362 aa		11.7	□□□□□ -0.54
ERF2	YLR246W	ASP3-3	P0CX78	362 aa		11.7	□□□□□ -0.54
ERF2	YLR246W	ASP3-4	P0CX79	362 aa		11.7	□□□□□ -0.54
ERF2	YLR246W	ASP3-1	P0CZ17	362 aa		11.7	□□□□□ -0.54
ERF2	YLR246W	RNR1	P21524	888 aa	Known RBP	11.7	□□□□□ -0.54
ERF2	YLR246W	VMA4	P22203	233 aa	Known RBP	11.7	□□□□□ -0.54
ERF2	YLR246W	RRT12	P25381	491 aa		11.7	□□□□□ -0.54
ERF2	YLR246W	MSS51	P32335	436 aa		11.7	□□□□□ -0.54
ERF2	YLR246W	KAP123	P40069	1113 aa	Known RBP	11.7	□□□□□ -0.54
ERF2	YLR246W	YDR222W	Q04925	415 aa		11.7	□□□□□ -0.54
ERF2	YLR246W	AIM41	Q12032	185 aa		11.7	□□□□□ -0.54
ERF2	YLR246W	ECM3	Q99252	613 aa		11.7	□□□□□ -0.54
ERF2	YLR246W	DBP1	P24784	617 aa	Known RBP	11.69	□□□□□ -0.54
ERF2	YLR246W	SKP2	P42843	763 aa		11.69	□□□□□ -0.54
ERF2	YLR246W	PHO86	P46956	311 aa		11.69	□□□□□ -0.54
ERF2	YLR246W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	11.69	□□□□□ -0.54	not detected
ERF2	YLR246W	DAK1	P54838	584 aa	Known RBP	11.69	□□□□□ -0.54
ERF2	YLR246W	YER152C	P10356	443 aa		11.68	□□□□□ -0.54
ERF2	YLR246W	RPL4A	P10664	362 aa	Known RBP	11.68	□□□□□ -0.54
ERF2	YLR246W	MUD2	P36084	527 aa	Known RBP	11.68	□□□□□ -0.54
ERF2	YLR246W	SPP381	P38282	291 aa	Predicted RBP	11.68	□□□□□ -0.54
ERF2	YLR246W	YJR107W	P47145	328 aa		11.68	□□□□□ -0.54
ERF2	YLR246W	RPL4B	P49626	362 aa	Known RBP	11.68	□□□□□ -0.54
ERF2	YLR246W	CUS1	Q02554	436 aa	Predicted RBP	11.68	□□□□□ -0.54
ERF2	YLR246W	RNT1	Q02555	471 aa		11.68	□□□□□ -0.54
ERF2	YLR246W	CWC21	Q03375	135 aa	Known RBP	11.68	□□□□□ -0.54
ERF2	YLR246W	RTP1	Q12751	981 aa		11.68	□□□□□ -0.54
ERF2	YLR246W	GYP6	P32806	458 aa		11.67	□□□□□ -0.54
ERF2	YLR246W	LAS1	P36146	502 aa	Predicted RBP	11.67	□□□□□ -0.54
ERF2	YLR246W	RUD3	Q12234	484 aa	Known RBP	11.67	□□□□□ -0.54
ERF2	YLR246W	RIF1	P29539	1916 aa		11.66	□□□□□ -0.54
ERF2	YLR246W	GAL10	P04397	699 aa		11.66	□□□□□ -0.54
ERF2	YLR246W	RAD1	P06777	1100 aa		11.66	□□□□□ -0.54
ERF2	YLR246W	PRR1	P28708	518 aa		11.66	□□□□□ -0.54
ERF2	YLR246W	YBL055C	P34220	418 aa	Predicted RBP	11.66	□□□□□ -0.54
ERF2	YLR246W	SAH1	P39954	449 aa	Known RBP	11.66	□□□□□ -0.54
ERF2	YLR246W	SAD1	P43589	448 aa		11.66	□□□□□ -0.54
ERF2	YLR246W	BRE5	P53741	515 aa	Known RBP	11.66	□□□□□ -0.54
ERF2	YLR246W	YLR455W	Q06188	304 aa		11.66	□□□□□ -0.54
ERF2	YLR246W	BCS1	P32839	456 aa		11.65	□□□□□ -0.54
ERF2	YLR246W	TIF5	P38431	405 aa	Known RBP	11.65	□□□□□ -0.54
ERF2	YLR246W	PMC1	P38929	1173 aa	Predicted RBP	11.65	□□□□□ -0.54
ERF2	YLR246W	PSF2	P40359	213 aa		11.65	□□□□□ -0.54
ERF2	YLR246W	RIM8	P53179	542 aa		11.65	□□□□□ -0.54
ERF2	YLR246W	HOP2	P53187	214 aa		11.65	□□□□□ -0.54
ERF2	YLR246W	MTG1	Q03151	367 aa	Predicted RBP	11.65	□□□□□ -0.54
ERF2	YLR246W	YMR187C	Q03236	431 aa		11.65	□□□□□ -0.54
ERF2	YLR246W	GYL1	Q04322	720 aa		11.65	□□□□□ -0.54
ERF2	YLR246W	TDA9	Q04545	1251 aa		11.65	□□□□□ -0.54
ERF2	YLR246W	SRF1	Q12516	437 aa		11.65	□□□□□ -0.54
ERF2	YLR246W	LAA1	P39526	2014 aa		11.64	□□□□□ -0.55
ERF2	YLR246W	PMS1	P14242	873 aa		11.64	□□□□□ -0.55
ERF2	YLR246W	GLN3	P18494	730 aa		11.64	□□□□□ -0.55
ERF2	YLR246W	SCJ1	P25303	377 aa		11.64	□□□□□ -0.55
ERF2	YLR246W	EFB1	P32471	206 aa	Known RBP	11.64	□□□□□ -0.55
ERF2	YLR246W	ABD1	P32783	436 aa	Predicted RBP	11.64	□□□□□ -0.55
ERF2	YLR246W	SEG2	P34250	1132 aa		11.64	□□□□□ -0.55
ERF2	YLR246W	CBR1	P38626	284 aa	Known RBP	11.64	□□□□□ -0.55
ERF2	YLR246W	YHR054C	P38780	354 aa		11.64	□□□□□ -0.55
ERF2	YLR246W	SAP1	P39955	897 aa	Known RBP	11.64	□□□□□ -0.55
ERF2	YLR246W	AIM21	P40563	679 aa		11.64	□□□□□ -0.55
ERF2	YLR246W	LAM5	P43560	674 aa		11.64	□□□□□ -0.55
ERF2	YLR246W	ISM1	P48526	1002 aa		11.64	□□□□□ -0.55
ERF2	YLR246W	UTP6	Q02354	440 aa	Known RBP	11.64	□□□□□ -0.55
ERF2	YLR246W	UTP13	Q05946	817 aa	Known RBP	11.64	□□□□□ -0.55
ERF2	YLR246W	OMS1	Q06668	471 aa		11.64	□□□□□ -0.55
ERF2	YLR246W	COX4	P04037	155 aa		11.63	□□□□□ -0.55
ERF2	YLR246W	ADE3	P07245	946 aa	Known RBP	11.63	□□□□□ -0.55
ERF2	YLR246W	ADE2	P21264	571 aa	Known RBP	11.63	□□□□□ -0.55
ERF2	YLR246W	ECM32	P32644	1121 aa	Known RBP	11.63	□□□□□ -0.55
ERF2	YLR246W	PTC4	P38089	393 aa		11.63	□□□□□ -0.55
ERF2	YLR246W	MMS21	P38632	267 aa		11.63	□□□□□ -0.55
ERF2	YLR246W	END3	P39013	349 aa		11.63	□□□□□ -0.55
ERF2	YLR246W	ASG1	P40467	964 aa		11.63	□□□□□ -0.55
ERF2	YLR246W	ULI1	P43604	169 aa		11.63	□□□□□ -0.55
ERF2	YLR246W	ALT1	P52893	592 aa		11.63	□□□□□ -0.55
ERF2	YLR246W	ALG11	P53954	548 aa	Known RBP	11.63	□□□□□ -0.55
ERF2	YLR246W	GPD1	Q00055	391 aa	Known RBP	11.63	□□□□□ -0.55
ERF2	YLR246W	DOT1	Q04089	582 aa	Known RBP	11.63	□□□□□ -0.55
ERF2	YLR246W	IVY1	Q04934	453 aa		11.63	□□□□□ -0.55
ERF2	YLR246W	STE23	Q06010	1027 aa		11.63	□□□□□ -0.55

Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms