RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C MAF1P41910 395 aa5.5□□□□□ -1.53
BUD28YLR062C TY1A-JR2P47099 440 aa5.5□□□□□ -1.53
BUD28YLR062C HSH155P49955 971 aaKnown RBP5.5□□□□□ -1.53
BUD28YLR062C CWC21Q03375 135 aaKnown RBP5.5□□□□□ -1.53
BUD28YLR062C SNU56Q03782 492 aaKnown RBP5.5□□□□□ -1.53
BUD28YLR062C TY1A-DR1Q03856 440 aa5.5□□□□□ -1.53
BUD28YLR062C TY1A-ML1Q04706 440 aaKnown RBP5.5□□□□□ -1.53
BUD28YLR062C DON1Q05610 365 aa5.5□□□□□ -1.53
BUD28YLR062C YLR257WQ06146 321 aaKnown RBP5.5□□□□□ -1.53
BUD28YLR062C TLG2Q08144 397 aa5.5□□□□□ -1.53
BUD28YLR062C SDH5Q08230 162 aa5.5□□□□□ -1.53
BUD28YLR062C PLP2Q12017 286 aa5.5□□□□□ -1.53
BUD28YLR062C REC8Q12188 680 aa5.5□□□□□ -1.53
BUD28YLR062C MNL2Q12205 849 aa5.5□□□□□ -1.53
BUD28YLR062C TY1A-BRQ12217 440 aa5.5□□□□□ -1.53
BUD28YLR062C RAD59Q12223 238 aa5.5□□□□□ -1.53
BUD28YLR062C LSP1Q12230 341 aaKnown RBP5.5□□□□□ -1.53
BUD28YLR062C MED1Q12321 566 aa5.5□□□□□ -1.53
BUD28YLR062C TY1A-NL2Q12470 440 aa5.5□□□□□ -1.53
BUD28YLR062C TY1A-GR2Q12485 440 aa5.5□□□□□ -1.53
BUD28YLR062C SNF1P06782 633 aaKnown RBP5.49□□□□□ -1.53
BUD28YLR062C ASP3-2P0CX77 362 aa5.49□□□□□ -1.53
BUD28YLR062C ASP3-3P0CX78 362 aa5.49□□□□□ -1.53
BUD28YLR062C ASP3-4P0CX79 362 aa5.49□□□□□ -1.53
BUD28YLR062C ASP3-1P0CZ17 362 aa5.49□□□□□ -1.53
BUD28YLR062C SSB1P11484 613 aaKnown RBP5.49□□□□□ -1.53
BUD28YLR062C PEX1P24004 1043 aa5.49□□□□□ -1.53
BUD28YLR062C RAD27P26793 382 aa5.49□□□□□ -1.53
BUD28YLR062C VPH1P32563 840 aaKnown RBP5.49□□□□□ -1.53
BUD28YLR062C YKL091CP33324 310 aaKnown RBP5.49□□□□□ -1.53
BUD28YLR062C YKT6P36015 200 aaKnown RBP5.49□□□□□ -1.53
BUD28YLR062C YHR054CP38780 354 aa5.49□□□□□ -1.53
BUD28YLR062C SSB2P40150 613 aaKnown RBP5.49□□□□□ -1.53
BUD28YLR062C CCT5P40413 562 aaKnown RBP5.49□□□□□ -1.53
BUD28YLR062C POL31P46957 487 aa5.49□□□□□ -1.53
BUD28YLR062C YPT11P48559 417 aa5.49□□□□□ -1.53
BUD28YLR062C NUT1P53114 1132 aa5.49□□□□□ -1.53
BUD28YLR062C SPC98P53540 846 aa5.49□□□□□ -1.53
BUD28YLR062C STP1Q00947 519 aa5.49□□□□□ -1.53
BUD28YLR062C YML083CQ04526 418 aa5.49□□□□□ -1.53
BUD28YLR062C CDD1Q06549 142 aa5.49□□□□□ -1.53
BUD28YLR062C SGO1Q08490 590 aa5.49□□□□□ -1.53
BUD28YLR062C YPL216WQ08964 1102 aa5.49□□□□□ -1.53
BUD28YLR062C SGT2Q12118 346 aaKnown RBP5.49□□□□□ -1.53
BUD28YLR062C IRA2P19158 3079 aa5.48□□□□□ -1.53
BUD28YLR062C GPA1P08539 472 aa5.48□□□□□ -1.53
BUD28YLR062C APE1P14904 514 aa5.48□□□□□ -1.53
BUD28YLR062C TRM1P15565 570 aaKnown RBP5.48□□□□□ -1.53
BUD28YLR062C SEC2P17065 759 aa5.48□□□□□ -1.53
BUD28YLR062C SAC6P32599 642 aaKnown RBP5.48□□□□□ -1.53
BUD28YLR062C PEP7P32609 515 aa5.48□□□□□ -1.53
BUD28YLR062C MNR2P35724 969 aa5.48□□□□□ -1.53
BUD28YLR062C YBR284WP38150 797 aa5.48□□□□□ -1.53
BUD28YLR062C UBP5P39944 805 aa5.48□□□□□ -1.53
BUD28YLR062C YER130CP39959 443 aa5.48□□□□□ -1.53
BUD28YLR062C SIP5P40210 489 aaKnown RBP5.48□□□□□ -1.53
BUD28YLR062C MOB1P40484 314 aa5.48□□□□□ -1.53
BUD28YLR062C CIR1P42940 261 aa5.48□□□□□ -1.53
BUD28YLR062C DAS1P47005 663 aa5.48□□□□□ -1.53
BUD28YLR062C TUB4P53378 473 aa5.48□□□□□ -1.53
BUD28YLR062C RLP24Q07915 199 aaKnown RBP5.48□□□□□ -1.53
BUD28YLR062C YOL075CQ08234 1294 aa5.48□□□□□ -1.53
BUD28YLR062C GAL80P04387 435 aa5.47□□□□□ -1.53
BUD28YLR062C SPE1P08432 466 aa5.47□□□□□ -1.53
BUD28YLR062C MAK16P10962 306 aaPredicted RBP5.47□□□□□ -1.53
BUD28YLR062C NAT1P12945 854 aaKnown RBP5.47□□□□□ -1.53
BUD28YLR062C CHS2P14180 963 aa5.47□□□□□ -1.53
BUD28YLR062C SPO11P23179 398 aa5.47□□□□□ -1.53
BUD28YLR062C PGS1P25578 521 aa5.47□□□□□ -1.53
BUD28YLR062C PPZ1P26570 692 aa5.47□□□□□ -1.53
BUD28YLR062C PIN4P34217 668 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
BUD28YLR062C YBL036CP38197 257 aa5.47□□□□□ -1.53
BUD28YLR062C PCM1P38628 557 aaKnown RBP5.47□□□□□ -1.53
BUD28YLR062C PEX28P38848 579 aa5.47□□□□□ -1.53
BUD28YLR062C FTR1P40088 404 aa5.47□□□□□ -1.53
BUD28YLR062C TOS3P43637 560 aa5.47□□□□□ -1.53
BUD28YLR062C FYV8P46949 817 aaKnown RBP5.47□□□□□ -1.53
BUD28YLR062C LSC2P53312 427 aa5.47□□□□□ -1.53
BUD28YLR062C TIM8P57744 87 aa5.47□□□□□ -1.53
BUD28YLR062C ADA2Q02336 434 aa5.47□□□□□ -1.53
BUD28YLR062C VMS1Q04311 632 aaKnown RBP5.47□□□□□ -1.53
BUD28YLR062C SPP382Q06411 708 aaPredicted RBP5.47□□□□□ -1.53
BUD28YLR062C MLH2Q07980 695 aa5.47□□□□□ -1.53
BUD28YLR062C RRD2Q12461 358 aa5.47□□□□□ -1.53
BUD28YLR062C APM4Q99186 491 aa5.47□□□□□ -1.53
BUD28YLR062C FAB1P34756 2278 aa5.47□□□□□ -1.53
BUD28YLR062C FMP27Q06179 2628 aa5.46□□□□□ -1.53
BUD28YLR062C TPK1P06244 397 aa5.46□□□□□ -1.54
BUD28YLR062C MAS1P10507 462 aa5.46□□□□□ -1.54
BUD28YLR062C OM45P16547 393 aa5.46□□□□□ -1.54
BUD28YLR062C IME1P21190 360 aa5.46□□□□□ -1.54
BUD28YLR062C VPS3P23643 1011 aa5.46□□□□□ -1.54
BUD28YLR062C SLA2P33338 968 aa5.46□□□□□ -1.54
BUD28YLR062C RIM4P38741 713 aa5.46□□□□□ -1.54
BUD28YLR062C BCD1P38772 366 aa5.46□□□□□ -1.54
BUD28YLR062C YGR237CP50089 785 aa5.46□□□□□ -1.54
BUD28YLR062C NOP13P53883 403 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
BUD28YLR062C TIF35Q04067 274 aaKnown RBP5.46□□□□□ -1.54
BUD28YLR062C FAL1Q12099 399 aaKnown RBP5.46□□□□□ -1.54
BUD28YLR062C GIS3Q12418 502 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms