RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C FLR1P38124 548 aa11.72□□□□□ -0.53
SPT8YLR055C YHL049CP38722 271 aa11.72□□□□□ -0.53
SPT8YLR055C SAK1P38990 1142 aa11.72□□□□□ -0.53
SPT8YLR055C YEL075CP39972 122 aa11.72□□□□□ -0.53
SPT8YLR055C YER189WP40104 122 aa11.72□□□□□ -0.53
SPT8YLR055C NUP82P40368 713 aa11.72□□□□□ -0.53
SPT8YLR055C ULP2P40537 1034 aaPredicted RBP11.72□□□□□ -0.53
SPT8YLR055C TDA10P42938 290 aa11.72□□□□□ -0.53
SPT8YLR055C YFL064CP43540 174 aa11.72□□□□□ -0.53
SPT8YLR055C GPI13Q07830 1017 aa11.72□□□□□ -0.53
SPT8YLR055C RIB2Q12362 591 aaKnown RBP11.72□□□□□ -0.53
SPT8YLR055C YBL111CQ3E7Y5 667 aa11.72□□□□□ -0.53
SPT8YLR055C MAS2P11914 482 aa11.72□□□□□ -0.53
SPT8YLR055C VAN1P23642 535 aa11.72□□□□□ -0.53
SPT8YLR055C PLC1P32383 869 aa11.72□□□□□ -0.53
SPT8YLR055C CBF5P33322 483 aaKnown RBP RIP-Chip data11.72□□□□□ -0.53not detected
SPT8YLR055C GPT2P36148 743 aa11.72□□□□□ -0.53
SPT8YLR055C AFG3P39925 761 aa11.72□□□□□ -0.53
SPT8YLR055C FIS1P40515 155 aa11.72□□□□□ -0.53
SPT8YLR055C INA22P40576 216 aa11.72□□□□□ -0.53
SPT8YLR055C SKP2P42843 763 aa11.72□□□□□ -0.53
SPT8YLR055C BRO1P48582 844 aa11.72□□□□□ -0.53
SPT8YLR055C FUS2Q05670 677 aa11.72□□□□□ -0.53
SPT8YLR055C YLR297WQ05899 129 aa11.72□□□□□ -0.53
SPT8YLR055C MAM3Q12296 706 aa11.72□□□□□ -0.53
SPT8YLR055C KAR3P17119 729 aa11.71□□□□□ -0.54
SPT8YLR055C PRP22P24384 1145 aaKnown RBP11.71□□□□□ -0.54
SPT8YLR055C GCD6P32501 712 aaKnown RBP11.71□□□□□ -0.54
SPT8YLR055C YME2P32843 850 aa11.71□□□□□ -0.54
SPT8YLR055C PAM1P37304 830 aaKnown RBP11.71□□□□□ -0.54
SPT8YLR055C TIF5P38431 405 aaKnown RBP11.71□□□□□ -0.54
SPT8YLR055C YMR1P47147 688 aaKnown RBP RIP-Chip data11.71□□□□□ -0.54not detected
SPT8YLR055C MRPS28P21771 286 aa11.7□□□□□ -0.54
SPT8YLR055C MRF1P30775 413 aaPredicted RBP11.7□□□□□ -0.54
SPT8YLR055C KSP1P38691 1029 aaKnown RBP11.7□□□□□ -0.54
SPT8YLR055C YEL025CP39991 1188 aa11.7□□□□□ -0.54
SPT8YLR055C SDH2P21801 266 aa11.7□□□□□ -0.54
SPT8YLR055C ZUO1P32527 433 aaKnown RBP11.7□□□□□ -0.54
SPT8YLR055C LDH1P38139 375 aa11.7□□□□□ -0.54
SPT8YLR055C HIS2P38635 335 aa11.7□□□□□ -0.54
SPT8YLR055C RPN3P40016 523 aaKnown RBP11.7□□□□□ -0.54
SPT8YLR055C HIF1Q12373 385 aa11.7□□□□□ -0.54
SPT8YLR055C MDM20Q12387 796 aaKnown RBP11.7□□□□□ -0.54
SPT8YLR055C BAS1P22035 811 aa11.69□□□□□ -0.54
SPT8YLR055C BUD14P27637 709 aa11.69□□□□□ -0.54
SPT8YLR055C MVD1P32377 396 aaKnown RBP11.69□□□□□ -0.54
SPT8YLR055C STE13P33894 931 aa11.69□□□□□ -0.54
SPT8YLR055C PSY2P40164 858 aa11.69□□□□□ -0.54
SPT8YLR055C MDR1P53258 950 aa11.69□□□□□ -0.54
SPT8YLR055C DAK1P54838 584 aaKnown RBP11.69□□□□□ -0.54
SPT8YLR055C SPO19Q03029 223 aa11.69□□□□□ -0.54
SPT8YLR055C ALR1Q08269 859 aa11.69□□□□□ -0.54
SPT8YLR055C MPC54Q08550 464 aa11.69□□□□□ -0.54
SPT8YLR055C ACM1Q08981 209 aa11.69□□□□□ -0.54
SPT8YLR055C GNT1Q12096 491 aa11.69□□□□□ -0.54
SPT8YLR055C NCR1Q12200 1170 aa11.69□□□□□ -0.54
SPT8YLR055C RPC37P36121 282 aa11.68□□□□□ -0.54
SPT8YLR055C AIM21P40563 679 aa11.68□□□□□ -0.54
SPT8YLR055C COS5P47187 383 aa11.68□□□□□ -0.54
SPT8YLR055C PSP2P50109 593 aaKnown RBP11.68□□□□□ -0.54
SPT8YLR055C VPS13Q07878 3144 aa11.68□□□□□ -0.54
SPT8YLR055C IME1P21190 360 aa11.67□□□□□ -0.54
SPT8YLR055C VPS35P34110 944 aa11.67□□□□□ -0.54
SPT8YLR055C PBP2P38151 413 aaKnown RBP RIP-Chip data11.67□□□□□ -0.54not detected
SPT8YLR055C RRT2P38332 387 aa11.67□□□□□ -0.54
SPT8YLR055C MMS21P38632 267 aa11.67□□□□□ -0.54
SPT8YLR055C VID30P53076 958 aa11.67□□□□□ -0.54
SPT8YLR055C ESBP6P53918 673 aa11.67□□□□□ -0.54
SPT8YLR055C DOS2P54858 310 aa11.67□□□□□ -0.54
SPT8YLR055C CUS1Q02554 436 aaPredicted RBP11.67□□□□□ -0.54
SPT8YLR055C MTG1Q03151 367 aaPredicted RBP11.67□□□□□ -0.54
SPT8YLR055C YML082WQ04533 649 aaKnown RBP11.67□□□□□ -0.54
SPT8YLR055C YPL277CQ08989 487 aa11.67□□□□□ -0.54
SPT8YLR055C SWI6P09959 803 aa11.67□□□□□ -0.54
SPT8YLR055C GCD2P12754 651 aaPredicted RBP11.67□□□□□ -0.54
SPT8YLR055C ATG19P35193 415 aa11.67□□□□□ -0.54
SPT8YLR055C UIP5P36137 443 aa11.67□□□□□ -0.54
SPT8YLR055C YNL144CP53907 740 aa11.67□□□□□ -0.54
SPT8YLR055C YDR278CQ05612 105 aa11.67□□□□□ -0.54
SPT8YLR055C MDM38Q08179 573 aa11.67□□□□□ -0.54
SPT8YLR055C SMC5Q08204 1093 aa11.67□□□□□ -0.54
SPT8YLR055C OSW1Q08692 278 aa11.67□□□□□ -0.54
SPT8YLR055C RTP1Q12751 981 aa11.67□□□□□ -0.54
SPT8YLR055C MOT1P32333 1867 aa11.66□□□□□ -0.54
SPT8YLR055C PEP5P12868 1029 aa11.66□□□□□ -0.54
SPT8YLR055C SPO16P17122 198 aa11.66□□□□□ -0.54
SPT8YLR055C KIN82P25341 720 aa11.66□□□□□ -0.54
SPT8YLR055C IRE1P32361 1115 aa11.66□□□□□ -0.54
SPT8YLR055C REV7P38927 245 aa11.66□□□□□ -0.54
SPT8YLR055C SPC72P39723 622 aa11.66□□□□□ -0.54
SPT8YLR055C YIL001WP40560 513 aa11.66□□□□□ -0.54
SPT8YLR055C MSC2Q03455 724 aa11.66□□□□□ -0.54
SPT8YLR055C SHE9Q04172 456 aa11.66□□□□□ -0.54
SPT8YLR055C ATG11Q12527 1178 aa11.66□□□□□ -0.54
SPT8YLR055C TCP1P12612 559 aaKnown RBP11.65□□□□□ -0.54
SPT8YLR055C SNA3P14359 133 aa11.65□□□□□ -0.54
SPT8YLR055C FZO1P38297 855 aa11.65□□□□□ -0.54
SPT8YLR055C FIG4P42837 879 aa11.65□□□□□ -0.54
SPT8YLR055C SHR3Q02774 210 aa11.65□□□□□ -0.54
SPT8YLR055C DED1P06634 604 aaKnown RBP11.65□□□□□ -0.55
Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms