RNA–Protein interactions for RNA: YLR043C

TRX1, Transcript of Cytoplasmic thioredoxin isoenzyme, yeastyeast

Gene TRX1, Length 312 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRX1YLR043C YBR259WP38338 688 aa2.49□□□□□ -2.01
TRX1YLR043C BCD1P38772 366 aa2.49□□□□□ -2.01
TRX1YLR043C TEX1P53851 422 aaKnown RBP2.49□□□□□ -2.01
TRX1YLR043C YDR338CQ05497 695 aa2.49□□□□□ -2.01
TRX1YLR043C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
TRX1YLR043C YOL098CQ12496 1037 aa2.49□□□□□ -2.01
TRX1YLR043C Q0142Q9ZZW4 58 aa2.49□□□□□ -2.01
TRX1YLR043C KIN3P22209 435 aa2.48□□□□□ -2.01
TRX1YLR043C YKL091CP33324 310 aaKnown RBP2.48□□□□□ -2.01
TRX1YLR043C PPZ2P33329 710 aa2.48□□□□□ -2.01
TRX1YLR043C CHZ1P40019 153 aaPredicted RBP2.48□□□□□ -2.01
TRX1YLR043C YFL052WP43551 465 aa2.48□□□□□ -2.01
TRX1YLR043C PRP31P49704 494 aaPredicted RBP2.48□□□□□ -2.01
TRX1YLR043C UBC11P52492 156 aa2.48□□□□□ -2.01
TRX1YLR043C YBP2P53169 641 aa2.48□□□□□ -2.01
TRX1YLR043C MTL1P53214 551 aa2.48□□□□□ -2.01
TRX1YLR043C RIA1P53893 1110 aa2.48□□□□□ -2.01
TRX1YLR043C GAD1Q04792 585 aa2.48□□□□□ -2.01
TRX1YLR043C CDC9P04819 755 aa2.47□□□□□ -2.01
TRX1YLR043C ERG6P25087 383 aaKnown RBP2.47□□□□□ -2.01
TRX1YLR043C HIR1P32479 840 aa2.47□□□□□ -2.01
TRX1YLR043C TIM23P32897 222 aa2.47□□□□□ -2.01
TRX1YLR043C MTC2P34246 357 aa2.47□□□□□ -2.01
TRX1YLR043C YHR112CP38716 378 aa2.47□□□□□ -2.01
TRX1YLR043C SFB3P38810 929 aa2.47□□□□□ -2.01
TRX1YLR043C DSS1P39112 969 aa2.47□□□□□ -2.01
TRX1YLR043C TAH11P47112 604 aa2.47□□□□□ -2.01
TRX1YLR043C MAL11P53048 616 aa2.47□□□□□ -2.01
TRX1YLR043C VPS73P53142 486 aaKnown RBP2.47□□□□□ -2.01
TRX1YLR043C NPY1P53164 384 aa2.47□□□□□ -2.01
TRX1YLR043C ORC4P54791 529 aa2.47□□□□□ -2.01
TRX1YLR043C SSL2Q00578 843 aa2.47□□□□□ -2.01
TRX1YLR043C SGO1Q08490 590 aa2.47□□□□□ -2.01
TRX1YLR043C YLR149CQ99296 730 aa2.47□□□□□ -2.01
TRX1YLR043C ATG2P53855 1592 aa2.47□□□□□ -2.01
TRX1YLR043C MET6P05694 767 aaKnown RBP2.46□□□□□ -2.02
TRX1YLR043C GFA1P14742 717 aaKnown RBP2.46□□□□□ -2.02
TRX1YLR043C ADE2P21264 571 aaKnown RBP2.46□□□□□ -2.02
TRX1YLR043C MVD1P32377 396 aaKnown RBP2.46□□□□□ -2.02
TRX1YLR043C MCD4P36051 919 aa2.46□□□□□ -2.02
TRX1YLR043C PBP2P38151 413 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
TRX1YLR043C RPN10P38886 268 aaKnown RBP2.46□□□□□ -2.02
TRX1YLR043C REV7P38927 245 aa2.46□□□□□ -2.02
TRX1YLR043C FMP52P40008 231 aa2.46□□□□□ -2.02
TRX1YLR043C ATF1P40353 525 aa2.46□□□□□ -2.02
TRX1YLR043C TEL2P53038 688 aa2.46□□□□□ -2.02
TRX1YLR043C CTK1Q03957 528 aaKnown RBP2.46□□□□□ -2.02
TRX1YLR043C RGC1Q06108 1083 aaKnown RBP2.46□□□□□ -2.02
TRX1YLR043C BPT1P14772 1559 aa2.45□□□□□ -2.02
TRX1YLR043C TAF2P23255 1407 aa2.45□□□□□ -2.02
TRX1YLR043C VBA3P25594 458 aa2.45□□□□□ -2.02
TRX1YLR043C STO1P34160 861 aaKnown RBP2.45□□□□□ -2.02
TRX1YLR043C CUE2P36075 443 aaKnown RBP2.45□□□□□ -2.02
TRX1YLR043C SIC1P38634 284 aa2.45□□□□□ -2.02
TRX1YLR043C RIX1P38883 763 aaPredicted RBP2.45□□□□□ -2.02
TRX1YLR043C LYS9P38999 446 aa2.45□□□□□ -2.02
TRX1YLR043C YJL206CP39529 758 aa2.45□□□□□ -2.02
TRX1YLR043C NUP82P40368 713 aa2.45□□□□□ -2.02
TRX1YLR043C BAP3P41815 604 aa2.45□□□□□ -2.02
TRX1YLR043C PAN2P53010 1115 aaPredicted RBP2.45□□□□□ -2.02
TRX1YLR043C BNR1P40450 1375 aa2.45□□□□□ -2.02
TRX1YLR043C HCA4P20448 770 aaKnown RBP2.44□□□□□ -2.02
TRX1YLR043C YKR051WP36142 418 aa2.44□□□□□ -2.02
TRX1YLR043C TRZ1P36159 838 aaPredicted RBP2.44□□□□□ -2.02
TRX1YLR043C MIP6P38760 659 aaKnown RBP2.44□□□□□ -2.02
TRX1YLR043C FMO1P38866 432 aa2.44□□□□□ -2.02
TRX1YLR043C CCT3P39077 534 aaKnown RBP2.44□□□□□ -2.02
TRX1YLR043C NDC80P40460 691 aa2.44□□□□□ -2.02
TRX1YLR043C CAF16P43569 289 aa2.44□□□□□ -2.02
TRX1YLR043C BNA2P47125 453 aa2.44□□□□□ -2.02
TRX1YLR043C CTR1P49573 406 aa2.44□□□□□ -2.02
TRX1YLR043C UBC9P50623 157 aaPredicted RBP2.44□□□□□ -2.02
TRX1YLR043C COX18P53239 316 aa2.44□□□□□ -2.02
TRX1YLR043C ARG5,6Q01217 863 aa2.44□□□□□ -2.02
TRX1YLR043C ATG11Q12527 1178 aa2.44□□□□□ -2.02
TRX1YLR043C YKL033W-AQ86ZR7 236 aa2.44□□□□□ -2.02
TRX1YLR043C HRP1Q99383 534 aaKnown RBP2.44□□□□□ -2.02
TRX1YLR043C SKI3P17883 1432 aaKnown RBP2.43□□□□□ -2.02
TRX1YLR043C RAD18P10862 487 aa2.43□□□□□ -2.02
TRX1YLR043C PHO8P11491 566 aa2.43□□□□□ -2.02
TRX1YLR043C MEF1P25039 761 aa2.43□□□□□ -2.02
TRX1YLR043C THI4P32318 326 aa2.43□□□□□ -2.02
TRX1YLR043C UBS1P38290 277 aa2.43□□□□□ -2.02
TRX1YLR043C OCA5P38738 679 aa2.43□□□□□ -2.02
TRX1YLR043C HRB1P38922 454 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
TRX1YLR043C NUP60P39705 539 aa2.43□□□□□ -2.02
TRX1YLR043C YNL195CP40168 261 aa2.43□□□□□ -2.02
TRX1YLR043C BUD6P41697 788 aa2.43□□□□□ -2.02
TRX1YLR043C CCT7P42943 550 aaKnown RBP2.43□□□□□ -2.02
TRX1YLR043C OSW7P43611 510 aa2.43□□□□□ -2.02
TRX1YLR043C SMX3P54999 86 aaPredicted RBP2.43□□□□□ -2.02
TRX1YLR043C SNP1Q00916 300 aaPredicted RBP2.43□□□□□ -2.02
TRX1YLR043C LEE1Q02799 301 aaKnown RBP2.43□□□□□ -2.02
TRX1YLR043C RPN4Q03465 531 aa2.43□□□□□ -2.02
TRX1YLR043C RPN7Q06103 429 aaKnown RBP2.43□□□□□ -2.02
TRX1YLR043C MLH3Q12083 715 aa2.43□□□□□ -2.02
TRX1YLR043C ZRT2Q12436 422 aa2.43□□□□□ -2.02
TRX1YLR043C MDM12Q92328 271 aa2.43□□□□□ -2.02
TRX1YLR043C TUB1P09733 447 aaKnown RBP2.42□□□□□ -2.02
TRX1YLR043C GSY1P23337 708 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms