RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C AMA1P50082 593 aa3.84□□□□□ -1.79
AFB1YLR040C AIM14P53109 570 aa3.84□□□□□ -1.79
AFB1YLR040C ADY4Q05955 493 aa3.84□□□□□ -1.79
AFB1YLR040C ATG33Q06485 197 aa3.84□□□□□ -1.79
AFB1YLR040C ADE2P21264 571 aaKnown RBP3.83□□□□□ -1.8
AFB1YLR040C ERG6P25087 383 aaKnown RBP3.83□□□□□ -1.8
AFB1YLR040C OAR1P35731 278 aa3.83□□□□□ -1.8
AFB1YLR040C HSL7P38274 827 aa3.83□□□□□ -1.8
AFB1YLR040C MIP6P38760 659 aaKnown RBP3.83□□□□□ -1.8
AFB1YLR040C HOS4P40480 1083 aa3.83□□□□□ -1.8
AFB1YLR040C YIR042CP40586 236 aa3.83□□□□□ -1.8
AFB1YLR040C YJL163CP46996 555 aa3.83□□□□□ -1.8
AFB1YLR040C PRP31P49704 494 aaPredicted RBP3.83□□□□□ -1.8
AFB1YLR040C TFB2Q02939 513 aa3.83□□□□□ -1.8
AFB1YLR040C YLR001CQ07895 862 aa3.83□□□□□ -1.8
AFB1YLR040C IRC13Q08630 104 aa3.83□□□□□ -1.8
AFB1YLR040C HMG1P12683 1054 aa3.82□□□□□ -1.8
AFB1YLR040C SFL1P20134 766 aa3.82□□□□□ -1.8
AFB1YLR040C PCM1P38628 557 aaKnown RBP3.82□□□□□ -1.8
AFB1YLR040C YHR112CP38716 378 aa3.82□□□□□ -1.8
AFB1YLR040C MET13P53128 600 aa3.82□□□□□ -1.8
AFB1YLR040C YNL193WP53870 558 aa3.82□□□□□ -1.8
AFB1YLR040C DNM1P54861 757 aa3.82□□□□□ -1.8
AFB1YLR040C ARP4P80428 489 aa3.82□□□□□ -1.8
AFB1YLR040C RPN7Q06103 429 aaKnown RBP3.82□□□□□ -1.8
AFB1YLR040C LAT1P12695 482 aaKnown RBP3.81□□□□□ -1.8
AFB1YLR040C RPL8AP17076 256 aaKnown RBP3.81□□□□□ -1.8
AFB1YLR040C NMD2P38798 1089 aaKnown RBP3.81□□□□□ -1.8
AFB1YLR040C MNN1P39106 762 aa3.81□□□□□ -1.8
AFB1YLR040C YBP2P53169 641 aa3.81□□□□□ -1.8
AFB1YLR040C ORC4P54791 529 aa3.81□□□□□ -1.8
AFB1YLR040C ARG5,6Q01217 863 aa3.81□□□□□ -1.8
AFB1YLR040C LEE1Q02799 301 aaKnown RBP3.81□□□□□ -1.8
AFB1YLR040C ACF2Q12168 779 aa3.81□□□□□ -1.8
AFB1YLR040C GIN4Q12263 1142 aa3.81□□□□□ -1.8
AFB1YLR040C YEL1P34225 687 aa3.8□□□□□ -1.8
AFB1YLR040C MNN4P36044 1178 aa3.8□□□□□ -1.8
AFB1YLR040C YKR018CP36114 725 aa3.8□□□□□ -1.8
AFB1YLR040C BCD1P38772 366 aa3.8□□□□□ -1.8
AFB1YLR040C LYS9P38999 446 aa3.8□□□□□ -1.8
AFB1YLR040C BAP3P41815 604 aa3.8□□□□□ -1.8
AFB1YLR040C MTL1P53214 551 aa3.8□□□□□ -1.8
AFB1YLR040C TMN2Q04562 672 aa3.8□□□□□ -1.8
AFB1YLR040C GAD1Q04792 585 aa3.8□□□□□ -1.8
AFB1YLR040C RGC1Q06108 1083 aaKnown RBP3.8□□□□□ -1.8
AFB1YLR040C NOP14Q99207 810 aaKnown RBP3.8□□□□□ -1.8
AFB1YLR040C CCR4P31384 837 aaKnown RBP3.79□□□□□ -1.8
AFB1YLR040C HIS7P33734 552 aaKnown RBP3.79□□□□□ -1.8
AFB1YLR040C ECM1P39715 212 aa3.79□□□□□ -1.8
AFB1YLR040C UBC11P52492 156 aa3.79□□□□□ -1.8
AFB1YLR040C PCL10P53124 433 aa3.79□□□□□ -1.8
AFB1YLR040C OMS1Q06668 471 aa3.79□□□□□ -1.8
AFB1YLR040C MCH5Q08777 521 aa3.79□□□□□ -1.8
AFB1YLR040C ATG11Q12527 1178 aa3.79□□□□□ -1.8
AFB1YLR040C HRP1Q99383 534 aaKnown RBP3.79□□□□□ -1.8
AFB1YLR040C HIR1P32479 840 aa3.78□□□□□ -1.8
AFB1YLR040C APL2P36000 726 aaPredicted RBP3.78□□□□□ -1.8
AFB1YLR040C DOT6P40059 670 aaKnown RBP3.78□□□□□ -1.8
AFB1YLR040C UBA2P52488 636 aa3.78□□□□□ -1.8
AFB1YLR040C BRE5P53741 515 aaKnown RBP3.78□□□□□ -1.8
AFB1YLR040C COG8Q04632 607 aa3.78□□□□□ -1.8
AFB1YLR040C MTH1P35198 433 aa3.77□□□□□ -1.81
AFB1YLR040C YHL017WP38745 532 aa3.77□□□□□ -1.81
AFB1YLR040C GND2P53319 492 aa3.77□□□□□ -1.81
AFB1YLR040C CTK1Q03957 528 aaKnown RBP3.77□□□□□ -1.81
AFB1YLR040C ADR1P07248 1323 aa3.76□□□□□ -1.81
AFB1YLR040C TRZ1P36159 838 aaPredicted RBP3.76□□□□□ -1.81
AFB1YLR040C PCL5P38794 229 aa3.76□□□□□ -1.81
AFB1YLR040C FMO1P38866 432 aa3.76□□□□□ -1.81
AFB1YLR040C GET2P40056 285 aa3.76□□□□□ -1.81
AFB1YLR040C MGS1P40151 587 aa3.76□□□□□ -1.81
AFB1YLR040C YNL195CP40168 261 aa3.76□□□□□ -1.81
AFB1YLR040C GID8P40208 455 aa3.76□□□□□ -1.81
AFB1YLR040C HMO1Q03973 246 aaKnown RBP3.76□□□□□ -1.81
AFB1YLR040C MCM21Q06675 368 aa3.76□□□□□ -1.81
AFB1YLR040C GUD1Q07729 489 aa3.76□□□□□ -1.81
AFB1YLR040C DCS2Q12123 353 aa3.76□□□□□ -1.81
AFB1YLR040C RNR1P21524 888 aaKnown RBP3.75□□□□□ -1.81
AFB1YLR040C SFP1P32432 683 aa3.75□□□□□ -1.81
AFB1YLR040C SPC42P36094 363 aa3.75□□□□□ -1.81
AFB1YLR040C AKL1P38080 1108 aaKnown RBP3.75□□□□□ -1.81
AFB1YLR040C SSZ1P38788 538 aaKnown RBP3.75□□□□□ -1.81
AFB1YLR040C HRB1P38922 454 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
AFB1YLR040C NUP60P39705 539 aa3.75□□□□□ -1.81
AFB1YLR040C FMP52P40008 231 aa3.75□□□□□ -1.81
AFB1YLR040C SDS3P40505 327 aa3.75□□□□□ -1.81
AFB1YLR040C SET2P46995 733 aaKnown RBP3.75□□□□□ -1.81
AFB1YLR040C DAS1P47005 663 aa3.75□□□□□ -1.81
AFB1YLR040C PAN2P53010 1115 aaPredicted RBP3.75□□□□□ -1.81
AFB1YLR040C TIM44Q01852 431 aa3.75□□□□□ -1.81
AFB1YLR040C REC102Q02721 264 aa3.75□□□□□ -1.81
AFB1YLR040C SGO1Q08490 590 aa3.75□□□□□ -1.81
AFB1YLR040C SIR3P06701 978 aa3.74□□□□□ -1.81
AFB1YLR040C MVD1P32377 396 aaKnown RBP3.74□□□□□ -1.81
AFB1YLR040C SFB3P38810 929 aa3.74□□□□□ -1.81
AFB1YLR040C YHR202WP38887 602 aa3.74□□□□□ -1.81
AFB1YLR040C CCT3P39077 534 aaKnown RBP3.74□□□□□ -1.81
AFB1YLR040C YJR039WP47107 1121 aa3.74□□□□□ -1.81
AFB1YLR040C SDA1P53313 767 aaKnown RBP3.74□□□□□ -1.81
AFB1YLR040C RIA1P53893 1110 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms