RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C STB4P50104 949 aa10.58□□□□□ -0.72
POM34YLR018C ALT2P52892 507 aa10.58□□□□□ -0.72
POM34YLR018C ALT1P52893 592 aa10.58□□□□□ -0.72
POM34YLR018C YGR021WP53212 290 aa10.58□□□□□ -0.72
POM34YLR018C SNU56Q03782 492 aaKnown RBP10.58□□□□□ -0.72
POM34YLR018C YLR455WQ06188 304 aa10.58□□□□□ -0.72
POM34YLR018C ECM30Q06673 1274 aa10.58□□□□□ -0.72
POM34YLR018C YOR022CQ12204 715 aa10.58□□□□□ -0.72
POM34YLR018C PUS1Q12211 544 aaKnown RBP10.58□□□□□ -0.72
POM34YLR018C ERG11P10614 530 aa10.57□□□□□ -0.72
POM34YLR018C CKI1P20485 582 aa10.57□□□□□ -0.72
POM34YLR018C SDH2P21801 266 aa10.57□□□□□ -0.72
POM34YLR018C RSA4P25382 515 aaKnown RBP10.57□□□□□ -0.72
POM34YLR018C SEC21P32074 935 aaKnown RBP10.57□□□□□ -0.72
POM34YLR018C CSE2P33308 149 aa10.57□□□□□ -0.72
POM34YLR018C YTA12P40341 825 aa10.57□□□□□ -0.72
POM34YLR018C NGL3Q03210 505 aa10.57□□□□□ -0.72
POM34YLR018C LDB19Q12502 818 aa10.57□□□□□ -0.72
POM34YLR018C EFB1P32471 206 aaKnown RBP10.56□□□□□ -0.72
POM34YLR018C GYP6P32806 458 aa10.56□□□□□ -0.72
POM34YLR018C PHO86P46956 311 aa10.56□□□□□ -0.72
POM34YLR018C ZAP1P47043 880 aa10.56□□□□□ -0.72
POM34YLR018C SYH1Q02875 849 aaKnown RBP10.56□□□□□ -0.72
POM34YLR018C HOS3Q02959 697 aaKnown RBP10.56□□□□□ -0.72
POM34YLR018C VPS60Q03390 229 aa10.56□□□□□ -0.72
POM34YLR018C YMR114CQ04471 368 aaKnown RBP10.56□□□□□ -0.72
POM34YLR018C MAG2Q06436 670 aaKnown RBP10.56□□□□□ -0.72
POM34YLR018C PIB1Q06651 286 aa10.56□□□□□ -0.72
POM34YLR018C CTF3Q12748 733 aa10.56□□□□□ -0.72
POM34YLR018C VMA4P22203 233 aaKnown RBP10.55□□□□□ -0.72
POM34YLR018C HEL1P36113 551 aa10.55□□□□□ -0.72
POM34YLR018C AGP2P38090 596 aa10.55□□□□□ -0.72
POM34YLR018C TBS1P38114 1094 aa10.55□□□□□ -0.72
POM34YLR018C REI1P38344 393 aaPredicted RBP10.55□□□□□ -0.72
POM34YLR018C CBR1P38626 284 aaKnown RBP10.55□□□□□ -0.72
POM34YLR018C KAP114P53067 1004 aa10.55□□□□□ -0.72
POM34YLR018C JJJ1P53863 590 aa10.55□□□□□ -0.72
POM34YLR018C FMP30Q02883 468 aa10.55□□□□□ -0.72
POM34YLR018C DIG1Q03063 452 aaKnown RBP10.55□□□□□ -0.72
POM34YLR018C YMR018WQ04364 514 aa10.55□□□□□ -0.72
POM34YLR018C DNL4Q08387 944 aaPredicted RBP10.55□□□□□ -0.72
POM34YLR018C YPR027CQ12079 277 aa10.55□□□□□ -0.72
POM34YLR018C MOT1P32333 1867 aa10.55□□□□□ -0.72
POM34YLR018C BLI1P35727 113 aa10.54□□□□□ -0.72
POM34YLR018C BCH2P36122 765 aa10.54□□□□□ -0.72
POM34YLR018C SMF1P38925 575 aa10.54□□□□□ -0.72
POM34YLR018C PSY2P40164 858 aa10.54□□□□□ -0.72
POM34YLR018C SPO74P45819 413 aa10.54□□□□□ -0.72
POM34YLR018C BTN2P53286 410 aa10.54□□□□□ -0.72
POM34YLR018C GPD1Q00055 391 aaKnown RBP10.54□□□□□ -0.72
POM34YLR018C EEB1Q02891 456 aa10.54□□□□□ -0.72
POM34YLR018C CHS1P08004 1131 aa10.53□□□□□ -0.72
POM34YLR018C PET111P08468 800 aa10.53□□□□□ -0.72
POM34YLR018C YER152CP10356 443 aa10.53□□□□□ -0.72
POM34YLR018C GFA1P14742 717 aaKnown RBP10.53□□□□□ -0.72
POM34YLR018C CAD1P24813 409 aaKnown RBP10.53□□□□□ -0.72
POM34YLR018C PAP1P29468 568 aaKnown RBP10.53□□□□□ -0.72
POM34YLR018C GRS1P38088 690 aaKnown RBP10.53□□□□□ -0.72
POM34YLR018C NCL1P38205 684 aaKnown RBP10.53□□□□□ -0.72
POM34YLR018C BRL1P38770 471 aa10.53□□□□□ -0.72
POM34YLR018C GEM1P39722 662 aa10.53□□□□□ -0.72
POM34YLR018C ESL1P40456 1118 aa10.53□□□□□ -0.72
POM34YLR018C CEP3P40969 608 aa10.53□□□□□ -0.72
POM34YLR018C YMR1P47147 688 aaKnown RBP RIP-Chip data10.53□□□□□ -0.72not detected
POM34YLR018C YDR222WQ04925 415 aa10.53□□□□□ -0.72
POM34YLR018C RPS3P05750 240 aaKnown RBP10.52□□□□□ -0.73
POM34YLR018C CIT2P08679 460 aa10.52□□□□□ -0.73
POM34YLR018C YFL040WP43562 540 aa10.52□□□□□ -0.73
POM34YLR018C YGL036WP53185 909 aaPredicted RBP10.52□□□□□ -0.73
POM34YLR018C YGR035CP53222 116 aa10.52□□□□□ -0.73
POM34YLR018C YGR111WP53265 400 aa10.52□□□□□ -0.73
POM34YLR018C GYL1Q04322 720 aa10.52□□□□□ -0.73
POM34YLR018C ESC8Q08119 714 aa10.52□□□□□ -0.73
POM34YLR018C REC8Q12188 680 aa10.52□□□□□ -0.73
POM34YLR018C RIF1P29539 1916 aa10.51□□□□□ -0.73
POM34YLR018C TIF1P10081 395 aaKnown RBP10.51□□□□□ -0.73
POM34YLR018C VPS3P23643 1011 aa10.51□□□□□ -0.73
POM34YLR018C VBA3P25594 458 aa10.51□□□□□ -0.73
POM34YLR018C DPB3P27344 201 aa10.51□□□□□ -0.73
POM34YLR018C VBA5P36172 582 aa10.51□□□□□ -0.73
POM34YLR018C RRT2P38332 387 aa10.51□□□□□ -0.73
POM34YLR018C TDA3P38758 523 aa10.51□□□□□ -0.73
POM34YLR018C YEL075CP39972 122 aa10.51□□□□□ -0.73
POM34YLR018C FIR1P40020 876 aa10.51□□□□□ -0.73
POM34YLR018C BRO1P48582 844 aa10.51□□□□□ -0.73
POM34YLR018C FOL2P51601 243 aaKnown RBP10.51□□□□□ -0.73
POM34YLR018C YGR130CP53278 816 aa10.51□□□□□ -0.73
POM34YLR018C CWC22P53333 577 aaKnown RBP10.51□□□□□ -0.73
POM34YLR018C YOR059CQ08448 450 aaKnown RBP10.51□□□□□ -0.73
POM34YLR018C PKH2Q12236 1081 aaKnown RBP10.51□□□□□ -0.73
POM34YLR018C SFI1Q12369 946 aa10.51□□□□□ -0.73
POM34YLR018C BI2P03873 423 aa10.5□□□□□ -0.73
POM34YLR018C BI4P03879 638 aa10.5□□□□□ -0.73
POM34YLR018C CYS3P31373 394 aaKnown RBP10.5□□□□□ -0.73
POM34YLR018C POA1P38218 177 aa10.5□□□□□ -0.73
POM34YLR018C SLX1P38324 304 aa10.5□□□□□ -0.73
POM34YLR018C HIS2P38635 335 aa10.5□□□□□ -0.73
POM34YLR018C BUD16P39988 312 aa10.5□□□□□ -0.73
POM34YLR018C YJR054WP47114 497 aa10.5□□□□□ -0.73
POM34YLR018C MND1P53102 219 aa10.5□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms