RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	DAL1	P32375	460 aa		4.76	□□□□□ -1.65
AVT1	YJR001W	HBS1	P32769	611 aa	Known RBP	4.76	□□□□□ -1.65
AVT1	YJR001W	FMP10	P40098	244 aa		4.76	□□□□□ -1.65
AVT1	YJR001W	NTA1	P40354	457 aa		4.76	□□□□□ -1.65
AVT1	YJR001W	YAP5	P40574	245 aa		4.76	□□□□□ -1.65
AVT1	YJR001W	GZF3	P42944	551 aa	Known RBP	4.76	□□□□□ -1.65
AVT1	YJR001W	RNR4	P49723	345 aa	Known RBP	4.76	□□□□□ -1.65
AVT1	YJR001W	YGR250C	P53316	781 aa	Known RBP	4.76	□□□□□ -1.65
AVT1	YJR001W	NCS2	P53923	493 aa	Predicted RBP	4.76	□□□□□ -1.65
AVT1	YJR001W	ADE12	P80210	433 aa	Known RBP	4.76	□□□□□ -1.65
AVT1	YJR001W	PTA1	Q01329	785 aa	Predicted RBP	4.76	□□□□□ -1.65
AVT1	YJR001W	SYF1	Q04048	859 aa	Predicted RBP	4.76	□□□□□ -1.65
AVT1	YJR001W	GSF2	Q04697	403 aa	Known RBP	4.76	□□□□□ -1.65
AVT1	YJR001W	AOS1	Q06624	347 aa		4.76	□□□□□ -1.65
AVT1	YJR001W	YBL111C	Q3E7Y5	667 aa		4.76	□□□□□ -1.65
AVT1	YJR001W	CFT1	Q06632	1357 aa	Known RBP	4.76	□□□□□ -1.65
AVT1	YJR001W	STF1	P01098	86 aa		4.75	□□□□□ -1.65
AVT1	YJR001W	SEC18	P18759	758 aa	Known RBP	4.75	□□□□□ -1.65
AVT1	YJR001W	DIT1	P21623	536 aa		4.75	□□□□□ -1.65
AVT1	YJR001W	RAD53	P22216	821 aa		4.75	□□□□□ -1.65
AVT1	YJR001W	DAL80	P26343	269 aa		4.75	□□□□□ -1.65
AVT1	YJR001W	PAH1	P32567	862 aa		4.75	□□□□□ -1.65
AVT1	YJR001W	MDJ1	P35191	511 aa		4.75	□□□□□ -1.65
AVT1	YJR001W	SIT1	P39980	628 aa		4.75	□□□□□ -1.65
AVT1	YJR001W	PCL10	P53124	433 aa		4.75	□□□□□ -1.65
AVT1	YJR001W	SPO19	Q03029	223 aa		4.75	□□□□□ -1.65
AVT1	YJR001W	HOT1	Q03213	719 aa		4.75	□□□□□ -1.65
AVT1	YJR001W	TIF6	Q12522	245 aa	Known RBP	4.75	□□□□□ -1.65
AVT1	YJR001W	RMP1	Q12530	201 aa		4.75	□□□□□ -1.65
AVT1	YJR001W	LEU1	P07264	779 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	SES1	P07284	462 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	SRO9	P25567	434 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	VAC17	P25591	423 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	FUN30	P31380	1131 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	CNS1	P33313	385 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	IRS4	P36115	615 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	SHC1	P39000	512 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	PSY2	P40164	858 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	MET18	P40469	1032 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	VHR1	P40522	640 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	SBE2	P42223	864 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	UBP6	P43593	499 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	MNN11	P46985	422 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	ALF1	P53904	254 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	BLS1	Q06071	122 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	UTP21	Q06078	939 aa	Predicted RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	HDA2	Q06629	674 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	GYP1	Q08484	637 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
AVT1	YJR001W	REX3	Q12090	404 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	YOL114C	Q12322	202 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	IML1	P47170	1584 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	PDR11	P40550	1411 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	RPC40	P07703	335 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	RAD18	P10862	487 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	PDX1	P16451	410 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	SEN2	P16658	377 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	TRX1	P22217	103 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	NUD1	P32336	851 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	ELM1	P32801	640 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	YBL028C	P38202	106 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	SLX1	P38324	304 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	HSM3	P38348	480 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	SAH1	P39954	449 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	LSM5	P40089	93 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	YIR042C	P40586	236 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	SAP155	P43612	1002 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	MON1	P53129	644 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	GUP1	P53154	560 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	SPO1	P53541	631 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	TIM10	P87108	93 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	RAT1	Q02792	1006 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	PRP42	Q03776	544 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	NNT1	Q05874	261 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	YDL073W	Q07454	984 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	RIO1	Q12196	484 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	PGA3	Q12746	312 aa	Known RBP	4.74	□□□□□ -1.65
AVT1	YJR001W	DNF2	Q12675	1612 aa		4.74	□□□□□ -1.65
AVT1	YJR001W	RAD3	P06839	778 aa		4.73	□□□□□ -1.65
AVT1	YJR001W	HEM13	P11353	328 aa	Known RBP	4.73	□□□□□ -1.65
AVT1	YJR001W	SEC2	P17065	759 aa		4.73	□□□□□ -1.65
AVT1	YJR001W	DAL7	P21826	554 aa		4.73	□□□□□ -1.65
AVT1	YJR001W	TFB1	P32776	642 aa		4.73	□□□□□ -1.65
AVT1	YJR001W	STN1	P38960	494 aa		4.73	□□□□□ -1.65
AVT1	YJR001W	MBP1	P39678	833 aa		4.73	□□□□□ -1.65
AVT1	YJR001W	ECM1	P39715	212 aa		4.73	□□□□□ -1.65
AVT1	YJR001W	EMP65	P40085	556 aa		4.73	□□□□□ -1.65
AVT1	YJR001W	PCL7	P40186	285 aa		4.73	□□□□□ -1.65
AVT1	YJR001W	RMD8	P43620	662 aa		4.73	□□□□□ -1.65
AVT1	YJR001W	MDE1	P47095	244 aa		4.73	□□□□□ -1.65
AVT1	YJR001W	CNM67	P53865	581 aa	Known RBP	4.73	□□□□□ -1.65
AVT1	YJR001W	CEG1	Q01159	459 aa	Predicted RBP	4.73	□□□□□ -1.65
AVT1	YJR001W	ADE13	Q05911	482 aa	Known RBP	4.73	□□□□□ -1.65
AVT1	YJR001W	CUE5	Q08412	411 aa	Known RBP	4.73	□□□□□ -1.65
AVT1	YJR001W	COB	P00163	385 aa		4.72	□□□□□ -1.65
AVT1	YJR001W	HTA1	P04911	132 aa	Known RBP	4.72	□□□□□ -1.65
AVT1	YJR001W	HTA2	P04912	132 aa		4.72	□□□□□ -1.65
AVT1	YJR001W	PDC1	P06169	563 aa	Known RBP	4.72	□□□□□ -1.65
AVT1	YJR001W	YER152C	P10356	443 aa		4.72	□□□□□ -1.65
AVT1	YJR001W	COX11	P19516	300 aa	Known RBP	4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms