RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C HUL4P40985 892 aa5.24□□□□□ -1.57
CTK2YJL006C YGR125WP53273 1036 aa5.24□□□□□ -1.57
CTK2YJL006C YKL033W-AQ86ZR7 236 aa5.24□□□□□ -1.57
CTK2YJL006C SIR3P06701 978 aa5.23□□□□□ -1.57
CTK2YJL006C CCT3P39077 534 aaKnown RBP5.23□□□□□ -1.57
CTK2YJL006C YEL020CP39994 560 aa5.23□□□□□ -1.57
CTK2YJL006C RLP7P40693 322 aaKnown RBP5.23□□□□□ -1.57
CTK2YJL006C ZDS1P50111 915 aaKnown RBP5.23□□□□□ -1.57
CTK2YJL006C TAF8Q03750 510 aa5.23□□□□□ -1.57
CTK2YJL006C MET7Q08645 548 aa5.23□□□□□ -1.57
CTK2YJL006C DIF1O13577 133 aa5.22□□□□□ -1.57
CTK2YJL006C PYC1P11154 1178 aaKnown RBP5.22□□□□□ -1.57
CTK2YJL006C GLG1P36143 616 aa5.22□□□□□ -1.57
CTK2YJL006C ECM1P39715 212 aa5.22□□□□□ -1.57
CTK2YJL006C ALG2P43636 503 aa5.22□□□□□ -1.57
CTK2YJL006C CTR1P49573 406 aa5.22□□□□□ -1.57
CTK2YJL006C YBP2P53169 641 aa5.22□□□□□ -1.57
CTK2YJL006C RPN13O13563 156 aa5.21□□□□□ -1.58
CTK2YJL006C PHR1P05066 565 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
CTK2YJL006C SFB3P38810 929 aa5.21□□□□□ -1.58
CTK2YJL006C ARG2P40360 574 aa5.21□□□□□ -1.58
CTK2YJL006C TIM54P47045 478 aa5.21□□□□□ -1.58
CTK2YJL006C PAN2P53010 1115 aaPredicted RBP5.21□□□□□ -1.58
CTK2YJL006C MTL1P53214 551 aa5.21□□□□□ -1.58
CTK2YJL006C MVD1P32377 396 aaKnown RBP5.2□□□□□ -1.58
CTK2YJL006C TMT1P32643 299 aa5.2□□□□□ -1.58
CTK2YJL006C UBS1P38290 277 aa5.2□□□□□ -1.58
CTK2YJL006C HXT16P47185 567 aa5.2□□□□□ -1.58
CTK2YJL006C PRP31P49704 494 aaPredicted RBP5.2□□□□□ -1.58
CTK2YJL006C ATP25Q03153 612 aa5.2□□□□□ -1.58
CTK2YJL006C CTK1Q03957 528 aaKnown RBP5.2□□□□□ -1.58
CTK2YJL006C MRI1Q06489 411 aaKnown RBP5.2□□□□□ -1.58
CTK2YJL006C BET3P36149 193 aa5.19□□□□□ -1.58
CTK2YJL006C FMO1P38866 432 aa5.19□□□□□ -1.58
CTK2YJL006C BDH2P39713 417 aa5.19□□□□□ -1.58
CTK2YJL006C GLO1P50107 326 aa5.19□□□□□ -1.58
CTK2YJL006C PER1P25625 357 aa5.18□□□□□ -1.58
CTK2YJL006C ORC2P32833 620 aa5.17□□□□□ -1.58
CTK2YJL006C YHR112CP38716 378 aa5.17□□□□□ -1.58
CTK2YJL006C LYS9P38999 446 aa5.17□□□□□ -1.58
CTK2YJL006C SEC5P89102 971 aa5.17□□□□□ -1.58
CTK2YJL006C ADE2P21264 571 aaKnown RBP5.16□□□□□ -1.58
CTK2YJL006C SPC29P33419 253 aa5.16□□□□□ -1.58
CTK2YJL006C HRB1P38922 454 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
CTK2YJL006C NUP60P39705 539 aa5.16□□□□□ -1.58
CTK2YJL006C ALY2P47029 1046 aa5.16□□□□□ -1.58
CTK2YJL006C UBC9P50623 157 aaPredicted RBP5.16□□□□□ -1.58
CTK2YJL006C ATG4P53867 494 aa5.16□□□□□ -1.58
CTK2YJL006C FLC1Q08967 793 aa5.16□□□□□ -1.58
CTK2YJL006C PHO11P35842 467 aa5.15□□□□□ -1.59
CTK2YJL006C TRZ1P36159 838 aaPredicted RBP5.15□□□□□ -1.59
CTK2YJL006C PHO12P38693 467 aa5.15□□□□□ -1.59
CTK2YJL006C YHR020WP38708 688 aaKnown RBP5.15□□□□□ -1.59
CTK2YJL006C TY4A-JP47023 414 aa5.15□□□□□ -1.59
CTK2YJL006C FHN1P53279 174 aa5.15□□□□□ -1.59
CTK2YJL006C HOM2P13663 365 aaKnown RBP5.14□□□□□ -1.59
CTK2YJL006C CCR4P31384 837 aaKnown RBP5.14□□□□□ -1.59
CTK2YJL006C APL2P36000 726 aaPredicted RBP5.14□□□□□ -1.59
CTK2YJL006C RTA1P53047 317 aa5.14□□□□□ -1.59
CTK2YJL006C ARG5,6Q01217 863 aa5.14□□□□□ -1.59
CTK2YJL006C YDR338CQ05497 695 aa5.14□□□□□ -1.59
CTK2YJL006C MLH3Q12083 715 aa5.14□□□□□ -1.59
CTK2YJL006C VPS34P22543 875 aa5.13□□□□□ -1.59
CTK2YJL006C PAC2P39937 518 aa5.13□□□□□ -1.59
CTK2YJL006C ORC4P54791 529 aa5.13□□□□□ -1.59
CTK2YJL006C APT2P36973 181 aa5.12□□□□□ -1.59
CTK2YJL006C RGC1Q06108 1083 aaKnown RBP5.12□□□□□ -1.59
CTK2YJL006C HRP1Q99383 534 aaKnown RBP5.12□□□□□ -1.59
CTK2YJL006C CAN1P04817 590 aa5.11□□□□□ -1.59
CTK2YJL006C ERG6P25087 383 aaKnown RBP5.11□□□□□ -1.59
CTK2YJL006C RSP5P39940 809 aaKnown RBP5.11□□□□□ -1.59
CTK2YJL006C RIM13Q03792 727 aa5.11□□□□□ -1.59
CTK2YJL006C ZRT2Q12436 422 aa5.11□□□□□ -1.59
CTK2YJL006C MCM21Q06675 368 aa5.1□□□□□ -1.59
CTK2YJL006C MRK1P50873 501 aa5.09□□□□□ -1.59
CTK2YJL006C HUL5P53119 910 aa5.09□□□□□ -1.59
CTK2YJL006C OSW1Q08692 278 aa5.09□□□□□ -1.59
CTK2YJL006C USV1Q12132 391 aa5.09□□□□□ -1.59
CTK2YJL006C YLR149CQ99296 730 aa5.09□□□□□ -1.59
CTK2YJL006C THR1P17423 357 aaKnown RBP5.08□□□□□ -1.6
CTK2YJL006C MUP3P38734 546 aa5.08□□□□□ -1.6
CTK2YJL006C YFL052WP43551 465 aa5.08□□□□□ -1.6
CTK2YJL006C NNF1P47149 201 aa5.08□□□□□ -1.6
CTK2YJL006C SEG1Q04279 960 aa5.08□□□□□ -1.6
CTK2YJL006C FUB1P25659 250 aa5.07□□□□□ -1.6
CTK2YJL006C GMH1P36125 273 aa5.07□□□□□ -1.6
CTK2YJL006C MIP6P38760 659 aaKnown RBP5.07□□□□□ -1.6
CTK2YJL006C BNA2P47125 453 aa5.07□□□□□ -1.6
CTK2YJL006C SLK19Q08581 821 aaKnown RBP5.07□□□□□ -1.6
CTK2YJL006C Q0142Q9ZZW4 58 aa5.07□□□□□ -1.6
CTK2YJL006C SET3P36124 751 aa5.06□□□□□ -1.6
CTK2YJL006C CRP1P38845 465 aaKnown RBP5.06□□□□□ -1.6
CTK2YJL006C GET2P40056 285 aa5.06□□□□□ -1.6
CTK2YJL006C GAT1P43574 510 aa5.06□□□□□ -1.6
CTK2YJL006C YJL049WP47048 450 aa5.06□□□□□ -1.6
CTK2YJL006C CLF1Q12309 687 aaPredicted RBP5.06□□□□□ -1.6
CTK2YJL006C GAL11P19659 1081 aa5.05□□□□□ -1.6
CTK2YJL006C RPA135P22138 1203 aaKnown RBP5.05□□□□□ -1.6
CTK2YJL006C ERG11P10614 530 aa5.04□□□□□ -1.6
CTK2YJL006C RNR1P21524 888 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms