RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeast

Gene URM1, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URM1	YIL008W	ORC4	P54791	529 aa		3.13	□□□□□ -1.91
URM1	YIL008W	UGO1	Q03327	502 aa		3.13	□□□□□ -1.91
URM1	YIL008W	IRC13	Q08630	104 aa		3.13	□□□□□ -1.91
URM1	YIL008W	YLR149C	Q99296	730 aa		3.13	□□□□□ -1.91
URM1	YIL008W	MEF1	P25039	761 aa		3.12	□□□□□ -1.91
URM1	YIL008W	HIS7	P33734	552 aa	Known RBP	3.12	□□□□□ -1.91
URM1	YIL008W	PEX6	P33760	1030 aa		3.12	□□□□□ -1.91
URM1	YIL008W	MTH1	P35198	433 aa		3.12	□□□□□ -1.91
URM1	YIL008W	QRI1	P43123	477 aa	Known RBP	3.12	□□□□□ -1.91
URM1	YIL008W	GND2	P53319	492 aa		3.12	□□□□□ -1.91
URM1	YIL008W	RIA1	P53893	1110 aa		3.12	□□□□□ -1.91
URM1	YIL008W	GAD1	Q04792	585 aa		3.12	□□□□□ -1.91
URM1	YIL008W	IRC10	Q08118	586 aa		3.12	□□□□□ -1.91
URM1	YIL008W	YTA7	P40340	1379 aa		3.12	□□□□□ -1.91
URM1	YIL008W	SRD1	P09007	221 aa		3.11	□□□□□ -1.91
URM1	YIL008W	SPC42	P36094	363 aa		3.11	□□□□□ -1.91
URM1	YIL008W	HSL7	P38274	827 aa		3.11	□□□□□ -1.91
URM1	YIL008W	MIP6	P38760	659 aa	Known RBP	3.11	□□□□□ -1.91
URM1	YIL008W	BCD1	P38772	366 aa		3.11	□□□□□ -1.91
URM1	YIL008W	FMP52	P40008	231 aa		3.11	□□□□□ -1.91
URM1	YIL008W	SDS3	P40505	327 aa		3.11	□□□□□ -1.91
URM1	YIL008W	BAP3	P41815	604 aa		3.11	□□□□□ -1.91
URM1	YIL008W	UBC11	P52492	156 aa		3.11	□□□□□ -1.91
URM1	YIL008W	NHX1	Q04121	633 aa		3.11	□□□□□ -1.91
URM1	YIL008W	POB3	Q04636	552 aa	Known RBP	3.11	□□□□□ -1.91
URM1	YIL008W	FPR4	Q06205	392 aa	Predicted RBP	3.11	□□□□□ -1.91
URM1	YIL008W	SGO1	Q08490	590 aa		3.11	□□□□□ -1.91
URM1	YIL008W	Q0142	Q9ZZW4	58 aa		3.11	□□□□□ -1.91
URM1	YIL008W	ADE2	P21264	571 aa	Known RBP	3.1	□□□□□ -1.91
URM1	YIL008W	MIH1	P23748	554 aa		3.1	□□□□□ -1.91
URM1	YIL008W	HOG1	P32485	435 aa		3.1	□□□□□ -1.91
URM1	YIL008W	APL2	P36000	726 aa	Predicted RBP	3.1	□□□□□ -1.91
URM1	YIL008W	YHR112C	P38716	378 aa		3.1	□□□□□ -1.91
URM1	YIL008W	PCL5	P38794	229 aa		3.1	□□□□□ -1.91
URM1	YIL008W	ARG5,6	Q01217	863 aa		3.1	□□□□□ -1.91
URM1	YIL008W	CTK1	Q03957	528 aa	Known RBP	3.1	□□□□□ -1.91
URM1	YIL008W	COG8	Q04632	607 aa		3.1	□□□□□ -1.91
URM1	YIL008W	RPN7	Q06103	429 aa	Known RBP	3.1	□□□□□ -1.91
URM1	YIL008W	MET6	P05694	767 aa	Known RBP	3.09	□□□□□ -1.91
URM1	YIL008W	HIR1	P32479	840 aa		3.09	□□□□□ -1.91
URM1	YIL008W	YEL1	P34225	687 aa		3.09	□□□□□ -1.91
URM1	YIL008W	YKR018C	P36114	725 aa		3.09	□□□□□ -1.91
URM1	YIL008W	YKR051W	P36142	418 aa		3.09	□□□□□ -1.91
URM1	YIL008W	TRZ1	P36159	838 aa	Predicted RBP	3.09	□□□□□ -1.91
URM1	YIL008W	APT2	P36973	181 aa		3.09	□□□□□ -1.91
URM1	YIL008W	REV7	P38927	245 aa		3.09	□□□□□ -1.91
URM1	YIL008W	TEL2	P53038	688 aa		3.09	□□□□□ -1.91
URM1	YIL008W	MTL1	P53214	551 aa		3.09	□□□□□ -1.91
URM1	YIL008W	YAP1802	P53309	568 aa		3.09	□□□□□ -1.91
URM1	YIL008W	SSL2	Q00578	843 aa		3.09	□□□□□ -1.91
URM1	YIL008W	MCM21	Q06675	368 aa		3.09	□□□□□ -1.91
URM1	YIL008W	RAD18	P10862	487 aa		3.08	□□□□□ -1.92
URM1	YIL008W	CBR1	P38626	284 aa	Known RBP	3.08	□□□□□ -1.92
URM1	YIL008W	CCT3	P39077	534 aa	Known RBP	3.08	□□□□□ -1.92
URM1	YIL008W	UBC9	P50623	157 aa	Predicted RBP	3.08	□□□□□ -1.92
URM1	YIL008W	ORC1	P54784	914 aa	Predicted RBP	3.08	□□□□□ -1.92
URM1	YIL008W	REC102	Q02721	264 aa		3.08	□□□□□ -1.92
URM1	YIL008W	NTG2	Q08214	380 aa		3.08	□□□□□ -1.92
URM1	YIL008W	MRH1	Q12117	320 aa	Predicted RBP	3.08	□□□□□ -1.92
URM1	YIL008W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
URM1	YIL008W	SIR3	P06701	978 aa		3.07	□□□□□ -1.92
URM1	YIL008W	CDC43	P18898	376 aa		3.07	□□□□□ -1.92
URM1	YIL008W	ERG6	P25087	383 aa	Known RBP	3.07	□□□□□ -1.92
URM1	YIL008W	PCL2	P25693	308 aa		3.07	□□□□□ -1.92
URM1	YIL008W	LYS9	P38999	446 aa		3.07	□□□□□ -1.92
URM1	YIL008W	NUP60	P39705	539 aa		3.07	□□□□□ -1.92
URM1	YIL008W	DOT6	P40059	670 aa	Known RBP	3.07	□□□□□ -1.92
URM1	YIL008W	PCL10	P53124	433 aa		3.07	□□□□□ -1.92
URM1	YIL008W	ATG33	Q06485	197 aa		3.07	□□□□□ -1.92
URM1	YIL008W	YKL033W-A	Q86ZR7	236 aa		3.07	□□□□□ -1.92
URM1	YIL008W	KIN3	P22209	435 aa		3.06	□□□□□ -1.92
URM1	YIL008W	MVD1	P32377	396 aa	Known RBP	3.06	□□□□□ -1.92
URM1	YIL008W	YPT53	P36019	220 aa		3.06	□□□□□ -1.92
URM1	YIL008W	PCM1	P38628	557 aa	Known RBP	3.06	□□□□□ -1.92
URM1	YIL008W	FMO1	P38866	432 aa		3.06	□□□□□ -1.92
URM1	YIL008W	GID8	P40208	455 aa		3.06	□□□□□ -1.92
URM1	YIL008W	PAN2	P53010	1115 aa	Predicted RBP	3.06	□□□□□ -1.92
URM1	YIL008W	AIM14	P53109	570 aa		3.06	□□□□□ -1.92
URM1	YIL008W	SMX3	P54999	86 aa	Predicted RBP	3.06	□□□□□ -1.92
URM1	YIL008W	ARP4	P80428	489 aa		3.06	□□□□□ -1.92
URM1	YIL008W	GIN4	Q12263	1142 aa		3.06	□□□□□ -1.92
URM1	YIL008W	HRP1	Q99383	534 aa	Known RBP	3.06	□□□□□ -1.92
URM1	YIL008W	PYC1	P11154	1178 aa	Known RBP	3.05	□□□□□ -1.92
URM1	YIL008W	HMG1	P12683	1054 aa		3.05	□□□□□ -1.92
URM1	YIL008W	GFA1	P14742	717 aa	Known RBP	3.05	□□□□□ -1.92
URM1	YIL008W	SFL1	P20134	766 aa		3.05	□□□□□ -1.92
URM1	YIL008W	RNR1	P21524	888 aa	Known RBP	3.05	□□□□□ -1.92
URM1	YIL008W	CCR4	P31384	837 aa	Known RBP	3.05	□□□□□ -1.92
URM1	YIL008W	RRP14	P36080	434 aa	Known RBP	3.05	□□□□□ -1.92
URM1	YIL008W	SFB3	P38810	929 aa		3.05	□□□□□ -1.92
URM1	YIL008W	VPS73	P53142	486 aa	Known RBP	3.05	□□□□□ -1.92
URM1	YIL008W	RNH70	P53331	553 aa		3.05	□□□□□ -1.92
URM1	YIL008W	HMO1	Q03973	246 aa	Known RBP	3.05	□□□□□ -1.92
URM1	YIL008W	PEX1	P24004	1043 aa		3.04	□□□□□ -1.92
URM1	YIL008W	DMC1	P25453	334 aa		3.04	□□□□□ -1.92
URM1	YIL008W	PPG1	P32838	368 aa		3.04	□□□□□ -1.92
URM1	YIL008W	MNN4	P36044	1178 aa		3.04	□□□□□ -1.92
URM1	YIL008W	APN2	P38207	520 aa		3.04	□□□□□ -1.92
URM1	YIL008W	TDP1	P38319	544 aa		3.04	□□□□□ -1.92
URM1	YIL008W	CRP1	P38845	465 aa	Known RBP	3.04	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms