RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W GDH3P39708 457 aa3.83□□□□□ -1.8
BCD1YHR040W IES5P40060 125 aa3.83□□□□□ -1.8
BCD1YHR040W VID28P40547 921 aa3.83□□□□□ -1.8
BCD1YHR040W DAS1P47005 663 aa3.83□□□□□ -1.8
BCD1YHR040W RTC4P53850 401 aa3.83□□□□□ -1.8
BCD1YHR040W SIW14P53965 281 aa3.83□□□□□ -1.8
BCD1YHR040W UBP16Q02863 499 aa3.83□□□□□ -1.8
BCD1YHR040W UME1Q03010 460 aa3.83□□□□□ -1.8
BCD1YHR040W GIR2Q03768 265 aaPredicted RBP3.83□□□□□ -1.8
BCD1YHR040W MRD1Q06106 887 aaKnown RBP3.83□□□□□ -1.8
BCD1YHR040W THI3Q07471 609 aa3.83□□□□□ -1.8
BCD1YHR040W CLF1Q12309 687 aaPredicted RBP3.83□□□□□ -1.8
BCD1YHR040W CEX1Q12453 761 aa3.83□□□□□ -1.8
BCD1YHR040W NOP58Q12499 511 aaKnown RBP3.83□□□□□ -1.8
BCD1YHR040W NBL1Q3E7Y6 73 aa3.83□□□□□ -1.8
BCD1YHR040W YRF1-3P0CX14 1859 aa3.82□□□□□ -1.8
BCD1YHR040W YRF1-7P0CX15 1859 aa3.82□□□□□ -1.8
BCD1YHR040W YRF1-6P53819 1859 aa3.82□□□□□ -1.8
BCD1YHR040W RPS4AP0CX35 261 aaKnown RBP3.82□□□□□ -1.8
BCD1YHR040W RPS4BP0CX36 261 aaKnown RBP3.82□□□□□ -1.8
BCD1YHR040W NFS1P25374 497 aa3.82□□□□□ -1.8
BCD1YHR040W RDS1P25611 832 aa3.82□□□□□ -1.8
BCD1YHR040W MGM1P32266 881 aa3.82□□□□□ -1.8
BCD1YHR040W SMY2P32909 740 aaKnown RBP3.82□□□□□ -1.8
BCD1YHR040W PGM1P33401 570 aaKnown RBP3.82□□□□□ -1.8
BCD1YHR040W RER2P35196 286 aa3.82□□□□□ -1.8
BCD1YHR040W DID4P36108 232 aa3.82□□□□□ -1.8
BCD1YHR040W PFF1P38244 976 aa3.82□□□□□ -1.8
BCD1YHR040W NPR3P38742 1146 aa3.82□□□□□ -1.8
BCD1YHR040W RTS1P38903 757 aa3.82□□□□□ -1.8
BCD1YHR040W NPR2P39923 615 aa3.82□□□□□ -1.8
BCD1YHR040W YMR147WP40218 223 aaKnown RBP3.82□□□□□ -1.8
BCD1YHR040W NIT1P40447 199 aa3.82□□□□□ -1.8
BCD1YHR040W MMM1P41800 426 aa3.82□□□□□ -1.8
BCD1YHR040W YJR120WP47157 116 aa3.82□□□□□ -1.8
BCD1YHR040W YPT11P48559 417 aa3.82□□□□□ -1.8
BCD1YHR040W HSV2P50079 448 aaPredicted RBP3.82□□□□□ -1.8
BCD1YHR040W MAL11P53048 616 aa3.82□□□□□ -1.8
BCD1YHR040W PIB2P53191 635 aa3.82□□□□□ -1.8
BCD1YHR040W ESF2P53743 316 aaKnown RBP3.82□□□□□ -1.8
BCD1YHR040W DUS1P53759 423 aaKnown RBP3.82□□□□□ -1.8
BCD1YHR040W HXT15P54854 567 aa3.82□□□□□ -1.8
BCD1YHR040W SND1Q04007 877 aa3.82□□□□□ -1.8
BCD1YHR040W YLR407WQ06070 228 aa3.82□□□□□ -1.8
BCD1YHR040W SGD1Q06132 899 aa3.82□□□□□ -1.8
BCD1YHR040W HDA2Q06629 674 aa3.82□□□□□ -1.8
BCD1YHR040W THI73Q07904 523 aa3.82□□□□□ -1.8
BCD1YHR040W YLR122CQ12312 125 aa3.82□□□□□ -1.8
BCD1YHR040W NSI1Q12457 570 aa3.82□□□□□ -1.8
BCD1YHR040W TOR1P35169 2470 aa3.82□□□□□ -1.8
BCD1YHR040W LAM4P38800 1345 aa3.81□□□□□ -1.8
BCD1YHR040W MSB1P21339 1137 aaKnown RBP3.81□□□□□ -1.8
BCD1YHR040W HIR1P32479 840 aa3.81□□□□□ -1.8
BCD1YHR040W MTC2P34246 357 aa3.81□□□□□ -1.8
BCD1YHR040W RDH54P38086 958 aa3.81□□□□□ -1.8
BCD1YHR040W YBR071WP38243 211 aa3.81□□□□□ -1.8
BCD1YHR040W TCD1P38756 429 aa3.81□□□□□ -1.8
BCD1YHR040W PEA2P40091 420 aa3.81□□□□□ -1.8
BCD1YHR040W ALR2P43553 858 aa3.81□□□□□ -1.8
BCD1YHR040W STU2P46675 888 aa3.81□□□□□ -1.8
BCD1YHR040W PIP2P52960 996 aa3.81□□□□□ -1.8
BCD1YHR040W GPG1P53130 126 aa3.81□□□□□ -1.8
BCD1YHR040W YGR130CP53278 816 aa3.81□□□□□ -1.8
BCD1YHR040W COG6P53959 839 aa3.81□□□□□ -1.8
BCD1YHR040W UBX4P54730 416 aa3.81□□□□□ -1.8
BCD1YHR040W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
BCD1YHR040W RKM2Q03942 479 aa3.81□□□□□ -1.8
BCD1YHR040W HCR1Q05775 265 aaKnown RBP3.81□□□□□ -1.8
BCD1YHR040W YLR001CQ07895 862 aa3.81□□□□□ -1.8
BCD1YHR040W FAP7Q12055 197 aaPredicted RBP3.81□□□□□ -1.8
BCD1YHR040W MDM12Q92328 271 aa3.81□□□□□ -1.8
BCD1YHR040W QCR6P00127 147 aa3.8□□□□□ -1.8
BCD1YHR040W HSP82P02829 709 aaKnown RBP3.8□□□□□ -1.8
BCD1YHR040W HEM13P11353 328 aaKnown RBP3.8□□□□□ -1.8
BCD1YHR040W FRS2P15625 503 aaKnown RBP3.8□□□□□ -1.8
BCD1YHR040W RET1P22276 1149 aaKnown RBP3.8□□□□□ -1.8
BCD1YHR040W MDL2P33311 773 aa3.8□□□□□ -1.8
BCD1YHR040W PIN4P34217 668 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
BCD1YHR040W WHI3P34761 661 aaKnown RBP3.8□□□□□ -1.8
BCD1YHR040W SAP190P36123 1033 aa3.8□□□□□ -1.8
BCD1YHR040W TOS1P38288 455 aa3.8□□□□□ -1.8
BCD1YHR040W YFH7P43591 353 aa3.8□□□□□ -1.8
BCD1YHR040W CIT3P43635 486 aa3.8□□□□□ -1.8
BCD1YHR040W VPS53P47061 822 aa3.8□□□□□ -1.8
BCD1YHR040W CUE3P53137 624 aaKnown RBP3.8□□□□□ -1.8
BCD1YHR040W RPS15Q01855 142 aaKnown RBP3.8□□□□□ -1.8
BCD1YHR040W ERO1Q03103 563 aa3.8□□□□□ -1.8
BCD1YHR040W INM2Q05533 292 aa3.8□□□□□ -1.8
BCD1YHR040W YLR225CQ05948 407 aaKnown RBP3.8□□□□□ -1.8
BCD1YHR040W YLR257WQ06146 321 aaKnown RBP3.8□□□□□ -1.8
BCD1YHR040W ACK1Q07622 623 aaPredicted RBP3.8□□□□□ -1.8
BCD1YHR040W YOR059CQ08448 450 aaKnown RBP3.8□□□□□ -1.8
BCD1YHR040W CTI6Q08923 506 aa3.8□□□□□ -1.8
BCD1YHR040W TIP41Q12199 356 aa3.8□□□□□ -1.8
BCD1YHR040W GRX6Q12438 231 aa3.8□□□□□ -1.8
BCD1YHR040W RKM4Q12504 494 aa3.8□□□□□ -1.8
BCD1YHR040W SES1P07284 462 aaKnown RBP3.79□□□□□ -1.8
BCD1YHR040W GPA1P08539 472 aa3.79□□□□□ -1.8
BCD1YHR040W SST2P11972 698 aaKnown RBP3.79□□□□□ -1.8
BCD1YHR040W INO1P11986 533 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 126.5 ms