RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W GCD6P32501 712 aaKnown RBP3.85□□□□□ -1.79
SPT6YGR116W HSP78P33416 811 aa3.85□□□□□ -1.79
SPT6YGR116W UTP11P34247 250 aaPredicted RBP3.85□□□□□ -1.79
SPT6YGR116W AST1P35183 429 aa3.85□□□□□ -1.79
SPT6YGR116W IES2P40154 320 aa3.85□□□□□ -1.79
SPT6YGR116W SYG1P40528 902 aa3.85□□□□□ -1.79
SPT6YGR116W PTK2P47116 818 aaKnown RBP3.85□□□□□ -1.79
SPT6YGR116W FAP1P53971 965 aa3.85□□□□□ -1.79
SPT6YGR116W HDA1P53973 706 aa3.85□□□□□ -1.79
SPT6YGR116W ULP1Q02724 621 aa3.85□□□□□ -1.79
SPT6YGR116W PPM1Q04081 328 aa3.85□□□□□ -1.79
SPT6YGR116W SXM1Q04175 944 aaKnown RBP3.85□□□□□ -1.79
SPT6YGR116W YMR027WQ04371 470 aa3.85□□□□□ -1.79
SPT6YGR116W YLR297WQ05899 129 aa3.85□□□□□ -1.79
SPT6YGR116W ADY4Q05955 493 aa3.85□□□□□ -1.79
SPT6YGR116W YPL260WQ08977 551 aa3.85□□□□□ -1.79
SPT6YGR116W YAK1P14680 807 aa3.85□□□□□ -1.79
SPT6YGR116W NUP120P35729 1037 aa3.85□□□□□ -1.79
SPT6YGR116W YHL008CP38750 627 aa3.85□□□□□ -1.79
SPT6YGR116W ROG3P43602 733 aa3.85□□□□□ -1.79
SPT6YGR116W ATG1P53104 897 aa3.85□□□□□ -1.79
SPT6YGR116W YNL247WP53852 767 aaKnown RBP3.85□□□□□ -1.79
SPT6YGR116W NOP15P53927 220 aaPredicted RBP3.85□□□□□ -1.79
SPT6YGR116W RCF1Q03713 159 aa3.85□□□□□ -1.79
SPT6YGR116W TRP2P00899 507 aaKnown RBP3.85□□□□□ -1.79
SPT6YGR116W PMS1P14242 873 aa3.85□□□□□ -1.79
SPT6YGR116W VMA2P16140 517 aaKnown RBP3.85□□□□□ -1.79
SPT6YGR116W CNA1P23287 553 aa3.85□□□□□ -1.79
SPT6YGR116W VPS35P34110 944 aa3.85□□□□□ -1.79
SPT6YGR116W PBP2P38151 413 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SPT6YGR116W GLO3P38682 493 aaKnown RBP3.85□□□□□ -1.79
SPT6YGR116W AIM21P40563 679 aa3.85□□□□□ -1.79
SPT6YGR116W YIR042CP40586 236 aa3.85□□□□□ -1.79
SPT6YGR116W TAF1P46677 1066 aa3.85□□□□□ -1.79
SPT6YGR116W STB2P46679 850 aa3.85□□□□□ -1.79
SPT6YGR116W LIA1P47120 325 aaKnown RBP3.85□□□□□ -1.79
SPT6YGR116W USE1P53146 245 aa3.85□□□□□ -1.79
SPT6YGR116W ORM1P53224 222 aa3.85□□□□□ -1.79
SPT6YGR116W ESBP6P53918 673 aa3.85□□□□□ -1.79
SPT6YGR116W ATG16Q03818 150 aa3.85□□□□□ -1.79
SPT6YGR116W PLP1Q04004 230 aa3.85□□□□□ -1.79
SPT6YGR116W SVF1Q05515 481 aa3.85□□□□□ -1.79
SPT6YGR116W RRP36Q12481 300 aaPredicted RBP3.85□□□□□ -1.79
SPT6YGR116W ATG11Q12527 1178 aa3.85□□□□□ -1.79
SPT6YGR116W YPR089WO13585 888 aa3.84□□□□□ -1.79
SPT6YGR116W THS1P04801 734 aaKnown RBP3.84□□□□□ -1.79
SPT6YGR116W GCR1P07261 785 aa3.84□□□□□ -1.79
SPT6YGR116W ATR1P13090 542 aa3.84□□□□□ -1.79
SPT6YGR116W CLB3P24870 427 aa3.84□□□□□ -1.79
SPT6YGR116W MRM1P25270 412 aa3.84□□□□□ -1.79
SPT6YGR116W SRO9P25567 434 aaKnown RBP3.84□□□□□ -1.79
SPT6YGR116W AAD3P25612 363 aa3.84□□□□□ -1.79
SPT6YGR116W PTH2P34222 208 aa3.84□□□□□ -1.79
SPT6YGR116W SET3P36124 751 aa3.84□□□□□ -1.79
SPT6YGR116W MSG5P38590 489 aa3.84□□□□□ -1.79
SPT6YGR116W DPH1P40487 425 aaKnown RBP3.84□□□□□ -1.79
SPT6YGR116W YGR054WP53235 642 aaKnown RBP3.84□□□□□ -1.79
SPT6YGR116W DRN1P53255 507 aaKnown RBP3.84□□□□□ -1.79
SPT6YGR116W YML082WQ04533 649 aaKnown RBP3.84□□□□□ -1.79
SPT6YGR116W PSF3Q12146 194 aa3.84□□□□□ -1.79
SPT6YGR116W SCM3Q12334 223 aa3.84□□□□□ -1.79
SPT6YGR116W MDM20Q12387 796 aaKnown RBP3.84□□□□□ -1.79
SPT6YGR116W ADF1Q2V2Q1 113 aa3.84□□□□□ -1.79
SPT6YGR116W SEM1O94742 89 aa3.84□□□□□ -1.79
SPT6YGR116W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79 RIP-Chip
SPT6YGR116W PET122P10355 254 aa3.84□□□□□ -1.79
SPT6YGR116W MDL2P33311 773 aa3.84□□□□□ -1.79
SPT6YGR116W CUE2P36075 443 aaKnown RBP3.84□□□□□ -1.79
SPT6YGR116W YBR032WP38223 100 aa3.84□□□□□ -1.79
SPT6YGR116W END3P39013 349 aa3.84□□□□□ -1.79
SPT6YGR116W BIM1P40013 344 aa3.84□□□□□ -1.79
SPT6YGR116W YMR226CQ05016 267 aaKnown RBP3.84□□□□□ -1.79
SPT6YGR116W THI3Q07471 609 aa3.84□□□□□ -1.79
SPT6YGR116W RKM1Q08961 583 aaPredicted RBP3.84□□□□□ -1.79
SPT6YGR116W TRM11Q12463 433 aa3.84□□□□□ -1.79
SPT6YGR116W BNI1P41832 1953 aa3.84□□□□□ -1.79
SPT6YGR116W BCK2P33306 851 aa3.84□□□□□ -1.8
SPT6YGR116W BCH2P36122 765 aa3.84□□□□□ -1.8
SPT6YGR116W ATG32P40458 529 aa3.84□□□□□ -1.8
SPT6YGR116W TAD1P53065 400 aa3.84□□□□□ -1.8
SPT6YGR116W TIM11P81449 96 aaPredicted RBP3.84□□□□□ -1.8
SPT6YGR116W SEN54Q02825 467 aaPredicted RBP3.84□□□□□ -1.8
SPT6YGR116W YML108WQ03759 105 aa3.84□□□□□ -1.8
SPT6YGR116W TCO89Q08921 799 aa3.84□□□□□ -1.8
SPT6YGR116W YIG1Q08956 461 aa3.84□□□□□ -1.8
SPT6YGR116W ACM1Q08981 209 aa3.84□□□□□ -1.8
SPT6YGR116W GRE2Q12068 342 aaKnown RBP3.84□□□□□ -1.8
SPT6YGR116W YML002WP0CF17 737 aa3.84□□□□□ -1.8
SPT6YGR116W BUD23P25627 275 aaPredicted RBP3.84□□□□□ -1.8
SPT6YGR116W RPT5P33297 434 aaKnown RBP3.84□□□□□ -1.8
SPT6YGR116W DUR3P33413 735 aa3.84□□□□□ -1.8
SPT6YGR116W ERC1P38767 581 aa3.84□□□□□ -1.8
SPT6YGR116W NAB3P38996 802 aaKnown RBP RIP-Chip data3.84□□□□□ -1.8not detected
SPT6YGR116W YMR134WP40207 237 aa3.84□□□□□ -1.8
SPT6YGR116W SWP82P43554 623 aa3.84□□□□□ -1.8
SPT6YGR116W RGD2P43556 714 aa3.84□□□□□ -1.8
SPT6YGR116W EMC2P47133 292 aaKnown RBP3.84□□□□□ -1.8
SPT6YGR116W RFX1P48743 811 aa3.84□□□□□ -1.8
SPT6YGR116W UBX4P54730 416 aa3.84□□□□□ -1.8
SPT6YGR116W YDR476CQ03362 224 aa3.84□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 137.4 ms