RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W YIR042CP40586 236 aa3.36□□□□□ -1.87
NIC96YFR002W YLR149CQ99296 730 aa3.36□□□□□ -1.87
NIC96YFR002W BNI1P41832 1953 aa3.35□□□□□ -1.87
NIC96YFR002W PHO8P11491 566 aa3.35□□□□□ -1.87
NIC96YFR002W LAT1P12695 482 aaKnown RBP3.35□□□□□ -1.87
NIC96YFR002W MIH1P23748 554 aa3.35□□□□□ -1.87
NIC96YFR002W HOS4P40480 1083 aa3.35□□□□□ -1.87
NIC96YFR002W GIS1Q03833 894 aa3.35□□□□□ -1.87
NIC96YFR002W IRC13Q08630 104 aa3.35□□□□□ -1.87
NIC96YFR002W YLR125WQ12138 136 aa3.35□□□□□ -1.87
NIC96YFR002W TEX1P53851 422 aaKnown RBP3.35□□□□□ -1.87
NIC96YFR002W Q0142Q9ZZW4 58 aa3.35□□□□□ -1.87
NIC96YFR002W VBA3P25594 458 aa3.34□□□□□ -1.87
NIC96YFR002W MSH2P25847 964 aa3.34□□□□□ -1.87
NIC96YFR002W STO1P34160 861 aaKnown RBP3.34□□□□□ -1.87
NIC96YFR002W YBR259WP38338 688 aa3.34□□□□□ -1.87
NIC96YFR002W CAF16P43569 289 aa3.34□□□□□ -1.87
NIC96YFR002W MTH1P35198 433 aa3.34□□□□□ -1.88
NIC96YFR002W YHL017WP38745 532 aa3.34□□□□□ -1.88
NIC96YFR002W SDS3P40505 327 aa3.34□□□□□ -1.88
NIC96YFR002W QRI1P43123 477 aaKnown RBP3.34□□□□□ -1.88
NIC96YFR002W GND2P53319 492 aa3.34□□□□□ -1.88
NIC96YFR002W SNP1Q00916 300 aaPredicted RBP3.34□□□□□ -1.88
NIC96YFR002W TIM44Q01852 431 aa3.34□□□□□ -1.88
NIC96YFR002W BCD1P38772 366 aa3.33□□□□□ -1.88
NIC96YFR002W ECM1P39715 212 aa3.33□□□□□ -1.88
NIC96YFR002W BAP3P41815 604 aa3.33□□□□□ -1.88
NIC96YFR002W DAS1P47005 663 aa3.33□□□□□ -1.88
NIC96YFR002W BNA2P47125 453 aa3.33□□□□□ -1.88
NIC96YFR002W ATG11Q12527 1178 aa3.33□□□□□ -1.88
NIC96YFR002W ATG2P53855 1592 aa3.33□□□□□ -1.88
NIC96YFR002W SGS1P35187 1447 aa3.33□□□□□ -1.88
NIC96YFR002W YOR093CQ12275 1648 aa3.33□□□□□ -1.88
NIC96YFR002W DSS1P39112 969 aa3.33□□□□□ -1.88
NIC96YFR002W IRC10Q08118 586 aa3.33□□□□□ -1.88
NIC96YFR002W YTA7P40340 1379 aa3.32□□□□□ -1.88
NIC96YFR002W SRD1P09007 221 aa3.32□□□□□ -1.88
NIC96YFR002W ADE2P21264 571 aaKnown RBP3.32□□□□□ -1.88
NIC96YFR002W PRP31P49704 494 aaPredicted RBP3.32□□□□□ -1.88
NIC96YFR002W UBC11P52492 156 aa3.32□□□□□ -1.88
NIC96YFR002W HBT1Q07653 1046 aaKnown RBP3.32□□□□□ -1.88
NIC96YFR002W GSY1P23337 708 aa3.32□□□□□ -1.88
NIC96YFR002W THI4P32318 326 aa3.32□□□□□ -1.88
NIC96YFR002W YKR051WP36142 418 aa3.32□□□□□ -1.88
NIC96YFR002W YHR112CP38716 378 aa3.32□□□□□ -1.88
NIC96YFR002W SPC42P36094 363 aa3.31□□□□□ -1.88
NIC96YFR002W MIP6P38760 659 aaKnown RBP3.31□□□□□ -1.88
NIC96YFR002W FMP52P40008 231 aa3.31□□□□□ -1.88
NIC96YFR002W YFL052WP43551 465 aa3.31□□□□□ -1.88
NIC96YFR002W ARG5,6Q01217 863 aa3.31□□□□□ -1.88
NIC96YFR002W UGO1Q03327 502 aa3.31□□□□□ -1.88
NIC96YFR002W GAD1Q04792 585 aa3.31□□□□□ -1.88
NIC96YFR002W RKR1Q04781 1562 aa3.31□□□□□ -1.88
NIC96YFR002W RPO31P04051 1460 aa3.31□□□□□ -1.88
NIC96YFR002W HIR1P32479 840 aa3.31□□□□□ -1.88
NIC96YFR002W HOG1P32485 435 aa3.31□□□□□ -1.88
NIC96YFR002W PEX6P33760 1030 aa3.31□□□□□ -1.88
NIC96YFR002W APL2P36000 726 aaPredicted RBP3.31□□□□□ -1.88
NIC96YFR002W PCL5P38794 229 aa3.31□□□□□ -1.88
NIC96YFR002W RPN10P38886 268 aaKnown RBP3.31□□□□□ -1.88
NIC96YFR002W LYS9P38999 446 aa3.31□□□□□ -1.88
NIC96YFR002W NPY1P53164 384 aa3.31□□□□□ -1.88
NIC96YFR002W YBP2P53169 641 aa3.31□□□□□ -1.88
NIC96YFR002W RIA1P53893 1110 aa3.31□□□□□ -1.88
NIC96YFR002W SGO1Q08490 590 aa3.31□□□□□ -1.88
NIC96YFR002W HIS7P33734 552 aaKnown RBP3.3□□□□□ -1.88
NIC96YFR002W MTL1P53214 551 aa3.3□□□□□ -1.88
NIC96YFR002W NHX1Q04121 633 aa3.3□□□□□ -1.88
NIC96YFR002W RGC1Q06108 1083 aaKnown RBP3.3□□□□□ -1.88
NIC96YFR002W NTG2Q08214 380 aa3.3□□□□□ -1.88
NIC96YFR002W MRH1Q12117 320 aaPredicted RBP3.3□□□□□ -1.88
NIC96YFR002W ERG6P25087 383 aaKnown RBP3.3□□□□□ -1.88
NIC96YFR002W STU2P46675 888 aa3.3□□□□□ -1.88
NIC96YFR002W TEL2P53038 688 aa3.3□□□□□ -1.88
NIC96YFR002W ARP4P80428 489 aa3.3□□□□□ -1.88
NIC96YFR002W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
NIC96YFR002W HRP1Q99383 534 aaKnown RBP3.3□□□□□ -1.88
NIC96YFR002W SIR3P06701 978 aa3.29□□□□□ -1.88
NIC96YFR002W RAD18P10862 487 aa3.29□□□□□ -1.88
NIC96YFR002W PCL2P25693 308 aa3.29□□□□□ -1.88
NIC96YFR002W YKR018CP36114 725 aa3.29□□□□□ -1.88
NIC96YFR002W HSL7P38274 827 aa3.29□□□□□ -1.88
NIC96YFR002W FMO1P38866 432 aa3.29□□□□□ -1.88
NIC96YFR002W ORC4P54791 529 aa3.29□□□□□ -1.88
NIC96YFR002W RPN7Q06103 429 aaKnown RBP3.29□□□□□ -1.88
NIC96YFR002W MCM21Q06675 368 aa3.29□□□□□ -1.88
NIC96YFR002W MMS1Q06211 1407 aa3.29□□□□□ -1.88
NIC96YFR002W CCT3P39077 534 aaKnown RBP3.29□□□□□ -1.88
NIC96YFR002W UBC9P50623 157 aaPredicted RBP3.29□□□□□ -1.88
NIC96YFR002W HMO1Q03973 246 aaKnown RBP3.29□□□□□ -1.88
NIC96YFR002W SUT2Q12286 268 aa3.29□□□□□ -1.88
NIC96YFR002W GID8P40208 455 aa3.28□□□□□ -1.88
NIC96YFR002W OSW7P43611 510 aa3.28□□□□□ -1.88
NIC96YFR002W PCL10P53124 433 aa3.28□□□□□ -1.88
NIC96YFR002W LEE1Q02799 301 aaKnown RBP3.28□□□□□ -1.88
NIC96YFR002W HRB1P38922 454 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
NIC96YFR002W FPR4Q06205 392 aaPredicted RBP3.28□□□□□ -1.88
NIC96YFR002W ATG33Q06485 197 aa3.28□□□□□ -1.88
NIC96YFR002W YLR001CQ07895 862 aa3.28□□□□□ -1.88
NIC96YFR002W DNF2Q12675 1612 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms