RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W SGT2Q12118 346 aaKnown RBP7.6□□□□□ -1.19
PDA1YER178W REC8Q12188 680 aa7.6□□□□□ -1.19
PDA1YER178W GAL80P04387 435 aa7.59□□□□□ -1.19
PDA1YER178W HAP2P06774 265 aa7.59□□□□□ -1.19
PDA1YER178W SPT2P06843 333 aaPredicted RBP7.59□□□□□ -1.19
PDA1YER178W RNR1P21524 888 aaKnown RBP7.59□□□□□ -1.19
PDA1YER178W CBF2P32504 956 aa7.59□□□□□ -1.19
PDA1YER178W HMT1P38074 348 aa7.59□□□□□ -1.19
PDA1YER178W SPT8P38915 602 aa7.59□□□□□ -1.19
PDA1YER178W SAH1P39954 449 aaKnown RBP7.59□□□□□ -1.19
PDA1YER178W YGR130CP53278 816 aa7.59□□□□□ -1.19
PDA1YER178W HEH2Q03281 663 aa7.59□□□□□ -1.19
PDA1YER178W GIR2Q03768 265 aaPredicted RBP7.59□□□□□ -1.19
PDA1YER178W PLP2Q12017 286 aa7.59□□□□□ -1.19
PDA1YER178W YPR027CQ12079 277 aa7.59□□□□□ -1.19
PDA1YER178W APM4Q99186 491 aa7.59□□□□□ -1.19
PDA1YER178W ECM3Q99252 613 aa7.59□□□□□ -1.19
PDA1YER178W YMR084WA2P2R3 262 aa7.58□□□□□ -1.2
PDA1YER178W NAT1P12945 854 aaKnown RBP7.58□□□□□ -1.2
PDA1YER178W SAT4P25333 603 aaKnown RBP7.58□□□□□ -1.2
PDA1YER178W OXP1P28273 1286 aa7.58□□□□□ -1.2
PDA1YER178W XRS2P33301 854 aa7.58□□□□□ -1.2
PDA1YER178W TRZ1P36159 838 aaPredicted RBP7.58□□□□□ -1.2
PDA1YER178W PCM1P38628 557 aaKnown RBP7.58□□□□□ -1.2
PDA1YER178W CCC2P38995 1004 aa7.58□□□□□ -1.2
PDA1YER178W VFA1P40080 203 aa7.58□□□□□ -1.2
PDA1YER178W ALT1P52893 592 aa7.58□□□□□ -1.2
PDA1YER178W NUT1P53114 1132 aa7.58□□□□□ -1.2
PDA1YER178W YNL011CP53980 444 aa7.58□□□□□ -1.2
PDA1YER178W SLG1P54867 378 aa7.58□□□□□ -1.2
PDA1YER178W RPA49Q01080 415 aaPredicted RBP7.58□□□□□ -1.2
PDA1YER178W MRI1Q06489 411 aaKnown RBP7.58□□□□□ -1.2
PDA1YER178W AI5_BETAQ9ZZX0 354 aa7.58□□□□□ -1.2
PDA1YER178W GAL10P04397 699 aa7.57□□□□□ -1.2
PDA1YER178W COX11P19516 300 aaKnown RBP7.57□□□□□ -1.2
PDA1YER178W PHO13P19881 312 aa7.57□□□□□ -1.2
PDA1YER178W MSH3P25336 1018 aa7.57□□□□□ -1.2
PDA1YER178W KIP1P28742 1111 aa7.57□□□□□ -1.2
PDA1YER178W SLA2P33338 968 aa7.57□□□□□ -1.2
PDA1YER178W MNR2P35724 969 aa7.57□□□□□ -1.2
PDA1YER178W YBR056WP38081 501 aa7.57□□□□□ -1.2
PDA1YER178W UME1Q03010 460 aa7.57□□□□□ -1.2
PDA1YER178W MRN1Q08925 612 aaKnown RBP RIP-Chip data7.57□□□□□ -1.2not detected
PDA1YER178W PPR1P07272 904 aaPredicted RBP7.56□□□□□ -1.2
PDA1YER178W POL3P15436 1097 aa7.56□□□□□ -1.2
PDA1YER178W IDI1P15496 288 aa7.56□□□□□ -1.2
PDA1YER178W SLX5P32828 619 aaKnown RBP7.56□□□□□ -1.2
PDA1YER178W CSG2P35206 410 aa7.56□□□□□ -1.2
PDA1YER178W TBS1P38114 1094 aa7.56□□□□□ -1.2
PDA1YER178W SIP5P40210 489 aaKnown RBP7.56□□□□□ -1.2
PDA1YER178W SDS3P40505 327 aa7.56□□□□□ -1.2
PDA1YER178W MMM1P41800 426 aa7.56□□□□□ -1.2
PDA1YER178W IES1P43579 692 aa7.56□□□□□ -1.2
PDA1YER178W LCD1Q04377 747 aa7.56□□□□□ -1.2
PDA1YER178W APL4Q12028 832 aa7.56□□□□□ -1.2
PDA1YER178W SPO12P17123 173 aa7.55□□□□□ -1.2
PDA1YER178W MCM2P29469 868 aa7.55□□□□□ -1.2
PDA1YER178W LEO1P38439 464 aa7.55□□□□□ -1.2
PDA1YER178W SBE2P42223 864 aaKnown RBP7.55□□□□□ -1.2
PDA1YER178W SMC3P47037 1230 aa7.55□□□□□ -1.2
PDA1YER178W PUS2P53167 370 aa7.55□□□□□ -1.2
PDA1YER178W MUB1Q03162 620 aa7.55□□□□□ -1.2
PDA1YER178W SGO1Q08490 590 aa7.55□□□□□ -1.2
PDA1YER178W YOL098CQ12496 1037 aa7.55□□□□□ -1.2
PDA1YER178W TRP2P00899 507 aaKnown RBP7.54□□□□□ -1.2
PDA1YER178W VBA3P25594 458 aa7.54□□□□□ -1.2
PDA1YER178W FRE1P32791 686 aa7.54□□□□□ -1.2
PDA1YER178W SMC1P32908 1225 aa7.54□□□□□ -1.2
PDA1YER178W MPE1P35728 441 aaKnown RBP7.54□□□□□ -1.2
PDA1YER178W VBA5P36172 582 aa7.54□□□□□ -1.2
PDA1YER178W SAF1P38352 637 aa7.54□□□□□ -1.2
PDA1YER178W YEL075CP39972 122 aa7.54□□□□□ -1.2
PDA1YER178W FYV8P46949 817 aaKnown RBP7.54□□□□□ -1.2
PDA1YER178W VPS75P53853 264 aa7.54□□□□□ -1.2
PDA1YER178W ESBP6P53918 673 aa7.54□□□□□ -1.2
PDA1YER178W ADA2Q02336 434 aa7.54□□□□□ -1.2
PDA1YER178W STE20Q03497 939 aaKnown RBP7.54□□□□□ -1.2
PDA1YER178W YML082WQ04533 649 aaKnown RBP7.54□□□□□ -1.2
PDA1YER178W SAM3Q08986 587 aa7.54□□□□□ -1.2
PDA1YER178W ATP1P07251 545 aaKnown RBP7.53□□□□□ -1.2
PDA1YER178W SPE1P08432 466 aa7.53□□□□□ -1.2
PDA1YER178W PGS1P25578 521 aa7.53□□□□□ -1.2
PDA1YER178W RAD27P26793 382 aa7.53□□□□□ -1.2
PDA1YER178W EXO5P38289 585 aa7.53□□□□□ -1.2
PDA1YER178W DYS1P38791 387 aa7.53□□□□□ -1.2
PDA1YER178W KAP123P40069 1113 aaKnown RBP7.53□□□□□ -1.2
PDA1YER178W DSE1P40077 573 aa7.53□□□□□ -1.2
PDA1YER178W PHO86P46956 311 aa7.53□□□□□ -1.2
PDA1YER178W YJL045WP47052 634 aa7.53□□□□□ -1.2
PDA1YER178W COS5P47187 383 aa7.53□□□□□ -1.2
PDA1YER178W YGL036WP53185 909 aaPredicted RBP7.53□□□□□ -1.2
PDA1YER178W NOP13P53883 403 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
PDA1YER178W HER2Q03557 464 aa7.53□□□□□ -1.2
PDA1YER178W SPO71Q03868 1245 aa7.53□□□□□ -1.2
PDA1YER178W TIF35Q04067 274 aaKnown RBP7.53□□□□□ -1.2
PDA1YER178W YML083CQ04526 418 aa7.53□□□□□ -1.2
PDA1YER178W HMI1Q12039 706 aa7.53□□□□□ -1.2
PDA1YER178W DAP1Q12091 152 aa7.53□□□□□ -1.2
PDA1YER178W HRT3Q12347 344 aa7.53□□□□□ -1.2
PDA1YER178W VPS3P23643 1011 aa7.52□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms