RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene SPC25, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC25	YER018C	SRB4	P32569	687 aa		11.57	□□□□□ -0.56
SPC25	YER018C	SAH1	P39954	449 aa	Known RBP	11.57	□□□□□ -0.56
SPC25	YER018C	YFL040W	P43562	540 aa		11.57	□□□□□ -0.56
SPC25	YER018C	STB4	P50104	949 aa		11.57	□□□□□ -0.56
SPC25	YER018C	ALT1	P52893	592 aa		11.57	□□□□□ -0.56
SPC25	YER018C	SNU56	Q03782	492 aa	Known RBP	11.57	□□□□□ -0.56
SPC25	YER018C	DAS2	Q12084	232 aa		11.57	□□□□□ -0.56
SPC25	YER018C	LAA1	P39526	2014 aa		11.57	□□□□□ -0.56
SPC25	YER018C	RNR1	P21524	888 aa	Known RBP	11.56	□□□□□ -0.56
SPC25	YER018C	GRS1	P38088	690 aa	Known RBP	11.56	□□□□□ -0.56
SPC25	YER018C	BRL1	P38770	471 aa		11.56	□□□□□ -0.56
SPC25	YER018C	FIR1	P40020	876 aa		11.56	□□□□□ -0.56
SPC25	YER018C	SPO74	P45819	413 aa		11.56	□□□□□ -0.56
SPC25	YER018C	VAC14	Q06708	880 aa		11.56	□□□□□ -0.56
SPC25	YER018C	CTF3	Q12748	733 aa		11.56	□□□□□ -0.56
SPC25	YER018C	VMA4	P22203	233 aa	Known RBP	11.55	□□□□□ -0.56
SPC25	YER018C	RRN6	P32786	894 aa		11.55	□□□□□ -0.56
SPC25	YER018C	HEL1	P36113	551 aa		11.55	□□□□□ -0.56
SPC25	YER018C	TBS1	P38114	1094 aa		11.55	□□□□□ -0.56
SPC25	YER018C	TCD1	P38756	429 aa		11.55	□□□□□ -0.56
SPC25	YER018C	DYS1	P38791	387 aa		11.55	□□□□□ -0.56
SPC25	YER018C	YTA12	P40341	825 aa		11.55	□□□□□ -0.56
SPC25	YER018C	ESL1	P40456	1118 aa		11.55	□□□□□ -0.56
SPC25	YER018C	YGR021W	P53212	290 aa		11.55	□□□□□ -0.56
SPC25	YER018C	SIL1	Q08199	421 aa		11.55	□□□□□ -0.56
SPC25	YER018C	DNL4	Q08387	944 aa	Predicted RBP	11.55	□□□□□ -0.56
SPC25	YER018C	CAD1	P24813	409 aa	Known RBP	11.54	□□□□□ -0.56
SPC25	YER018C	SEC21	P32074	935 aa	Known RBP	11.54	□□□□□ -0.56
SPC25	YER018C	NDC80	P40460	691 aa		11.54	□□□□□ -0.56
SPC25	YER018C	FOL2	P51601	243 aa	Known RBP	11.54	□□□□□ -0.56
SPC25	YER018C	YGR035C	P53222	116 aa		11.54	□□□□□ -0.56
SPC25	YER018C	JJJ1	P53863	590 aa		11.54	□□□□□ -0.56
SPC25	YER018C	SML1	Q04964	104 aa		11.54	□□□□□ -0.56
SPC25	YER018C	YPR027C	Q12079	277 aa		11.54	□□□□□ -0.56
SPC25	YER018C	TIF1	P10081	395 aa	Known RBP	11.53	□□□□□ -0.56
SPC25	YER018C	SCJ1	P25303	377 aa		11.53	□□□□□ -0.56
SPC25	YER018C	HXT1	P32465	570 aa		11.53	□□□□□ -0.56
SPC25	YER018C	GYP6	P32806	458 aa		11.53	□□□□□ -0.56
SPC25	YER018C	GEM1	P39722	662 aa		11.53	□□□□□ -0.56
SPC25	YER018C	PSY2	P40164	858 aa		11.53	□□□□□ -0.56
SPC25	YER018C	YGR130C	P53278	816 aa		11.53	□□□□□ -0.56
SPC25	YER018C	SYH1	Q02875	849 aa	Known RBP	11.53	□□□□□ -0.56
SPC25	YER018C	EEB1	Q02891	456 aa		11.53	□□□□□ -0.56
SPC25	YER018C	YMR018W	Q04364	514 aa		11.53	□□□□□ -0.56
SPC25	YER018C	ESC8	Q08119	714 aa		11.53	□□□□□ -0.56
SPC25	YER018C	REC8	Q12188	680 aa		11.53	□□□□□ -0.56
SPC25	YER018C	MCM16	Q12262	181 aa		11.53	□□□□□ -0.56
SPC25	YER018C	ERG11	P10614	530 aa		11.52	□□□□□ -0.57
SPC25	YER018C	CKI1	P20485	582 aa		11.52	□□□□□ -0.57
SPC25	YER018C	AGP2	P38090	596 aa		11.52	□□□□□ -0.57
SPC25	YER018C	CBR1	P38626	284 aa	Known RBP	11.52	□□□□□ -0.57
SPC25	YER018C	PHO86	P46956	311 aa		11.52	□□□□□ -0.57
SPC25	YER018C	ZAP1	P47043	880 aa		11.52	□□□□□ -0.57
SPC25	YER018C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	11.52	□□□□□ -0.57	not detected
SPC25	YER018C	BOP3	P53958	396 aa		11.52	□□□□□ -0.57
SPC25	YER018C	GPD1	Q00055	391 aa	Known RBP	11.52	□□□□□ -0.57
SPC25	YER018C	CHS1	P08004	1131 aa		11.51	□□□□□ -0.57
SPC25	YER018C	CIT2	P08679	460 aa		11.51	□□□□□ -0.57
SPC25	YER018C	YER152C	P10356	443 aa		11.51	□□□□□ -0.57
SPC25	YER018C	VPS3	P23643	1011 aa		11.51	□□□□□ -0.57
SPC25	YER018C	WHI3	P34761	661 aa	Known RBP	11.51	□□□□□ -0.57
SPC25	YER018C	POA1	P38218	177 aa		11.51	□□□□□ -0.57
SPC25	YER018C	VPS60	Q03390	229 aa		11.51	□□□□□ -0.57
SPC25	YER018C	RCR2	Q03446	210 aa	Known RBP	11.51	□□□□□ -0.57
SPC25	YER018C	YMR114C	Q04471	368 aa	Known RBP	11.51	□□□□□ -0.57
SPC25	YER018C	PKH2	Q12236	1081 aa	Known RBP	11.51	□□□□□ -0.57
SPC25	YER018C	RPS3	P05750	240 aa	Known RBP	11.5	□□□□□ -0.57
SPC25	YER018C	BLI1	P35727	113 aa		11.5	□□□□□ -0.57
SPC25	YER018C	NCL1	P38205	684 aa	Known RBP	11.5	□□□□□ -0.57
SPC25	YER018C	SLX1	P38324	304 aa		11.5	□□□□□ -0.57
SPC25	YER018C	XDJ1	P39102	459 aa		11.5	□□□□□ -0.57
SPC25	YER018C	YJR054W	P47114	497 aa		11.5	□□□□□ -0.57
SPC25	YER018C	KAP114	P53067	1004 aa		11.5	□□□□□ -0.57
SPC25	YER018C	YGL036W	P53185	909 aa	Predicted RBP	11.5	□□□□□ -0.57
SPC25	YER018C	YGR111W	P53265	400 aa		11.5	□□□□□ -0.57
SPC25	YER018C	NGL3	Q03210	505 aa		11.5	□□□□□ -0.57
SPC25	YER018C	MZM1	Q03429	123 aa	Predicted RBP	11.5	□□□□□ -0.57
SPC25	YER018C	SKY1	Q03656	742 aa		11.5	□□□□□ -0.57
SPC25	YER018C	TIF35	Q04067	274 aa	Known RBP	11.5	□□□□□ -0.57
SPC25	YER018C	CYS3	P31373	394 aa	Known RBP	11.49	□□□□□ -0.57
SPC25	YER018C	NOP4	P37838	685 aa	Known RBP	11.49	□□□□□ -0.57
SPC25	YER018C	REI1	P38344	393 aa	Predicted RBP	11.49	□□□□□ -0.57
SPC25	YER018C	MND1	P53102	219 aa		11.49	□□□□□ -0.57
SPC25	YER018C	BTN2	P53286	410 aa		11.49	□□□□□ -0.57
SPC25	YER018C	STP1	Q00947	519 aa		11.49	□□□□□ -0.57
SPC25	YER018C	HOS3	Q02959	697 aa	Known RBP	11.49	□□□□□ -0.57
SPC25	YER018C	DIG1	Q03063	452 aa	Known RBP	11.49	□□□□□ -0.57
SPC25	YER018C	YDR222W	Q04925	415 aa		11.49	□□□□□ -0.57
SPC25	YER018C	GFA1	P14742	717 aa	Known RBP	11.48	□□□□□ -0.57
SPC25	YER018C	VBA3	P25594	458 aa		11.48	□□□□□ -0.57
SPC25	YER018C	SPT5	P27692	1063 aa	Known RBP	11.48	□□□□□ -0.57
SPC25	YER018C	BCH2	P36122	765 aa		11.48	□□□□□ -0.57
SPC25	YER018C	VBA5	P36172	582 aa		11.48	□□□□□ -0.57
SPC25	YER018C	TDA3	P38758	523 aa		11.48	□□□□□ -0.57
SPC25	YER018C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	11.48	□□□□□ -0.57	not detected
SPC25	YER018C	MUB1	Q03162	620 aa		11.48	□□□□□ -0.57
SPC25	YER018C	GYL1	Q04322	720 aa		11.48	□□□□□ -0.57
SPC25	YER018C	SDH5	Q08230	162 aa		11.48	□□□□□ -0.57
SPC25	YER018C	YOR059C	Q08448	450 aa	Known RBP	11.48	□□□□□ -0.57
SPC25	YER018C	VPS13	Q07878	3144 aa		11.47	□□□□□ -0.57

Retrieved 100 of 5,963 RNA–protein pairs in 99 ms