RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W OXP1P28273 1286 aa8.03□□□□□ -1.12
YRF1-1YDR545W SPT16P32558 1035 aaKnown RBP8.03□□□□□ -1.12
YRF1-1YDR545W STT3P39007 718 aaKnown RBP8.03□□□□□ -1.12
YRF1-1YDR545W SSP120P39931 234 aaKnown RBP8.03□□□□□ -1.12
YRF1-1YDR545W SCM3Q12334 223 aa8.03□□□□□ -1.12
YRF1-1YDR545W ATG11Q12527 1178 aa8.03□□□□□ -1.12
YRF1-1YDR545W NPL4P33755 580 aa8.02□□□□□ -1.12
YRF1-1YDR545W TRZ1P36159 838 aaPredicted RBP8.02□□□□□ -1.12
YRF1-1YDR545W TGL4P36165 910 aa8.02□□□□□ -1.12
YRF1-1YDR545W CBK1P53894 756 aa8.02□□□□□ -1.12
YRF1-1YDR545W SYH1Q02875 849 aaKnown RBP8.02□□□□□ -1.12
YRF1-1YDR545W SXM1Q04175 944 aaKnown RBP8.02□□□□□ -1.12
YRF1-1YDR545W VAM6Q07468 1049 aa8.02□□□□□ -1.12
YRF1-1YDR545W PEX15Q08215 383 aa8.02□□□□□ -1.12
YRF1-1YDR545W ATR1P13090 542 aa8.02□□□□□ -1.13
YRF1-1YDR545W RET1P22276 1149 aaKnown RBP8.02□□□□□ -1.13
YRF1-1YDR545W MDL2P33311 773 aa8.02□□□□□ -1.13
YRF1-1YDR545W UBP13P38187 747 aa8.02□□□□□ -1.13
YRF1-1YDR545W BRL1P38770 471 aa8.02□□□□□ -1.13
YRF1-1YDR545W LCP5P40079 357 aaPredicted RBP8.02□□□□□ -1.13
YRF1-1YDR545W MUB1Q03162 620 aa8.02□□□□□ -1.13
YRF1-1YDR545W YPL191CQ08930 360 aa8.02□□□□□ -1.13
YRF1-1YDR545W RSF2P46974 1380 aa8.02□□□□□ -1.13
YRF1-1YDR545W MSS116P15424 664 aaKnown RBP8.02□□□□□ -1.13
YRF1-1YDR545W TPO5P36029 618 aa8.02□□□□□ -1.13
YRF1-1YDR545W ATG14P38270 344 aa8.02□□□□□ -1.13
YRF1-1YDR545W IES5P40060 125 aa8.02□□□□□ -1.13
YRF1-1YDR545W USE1P53146 245 aa8.02□□□□□ -1.13
YRF1-1YDR545W UTP22P53254 1237 aaPredicted RBP8.02□□□□□ -1.13
YRF1-1YDR545W PRP42Q03776 544 aaKnown RBP8.02□□□□□ -1.13
YRF1-1YDR545W ACM1Q08981 209 aa8.02□□□□□ -1.13
YRF1-1YDR545W REP1P03871 373 aa8.02□□□□□ -1.13
YRF1-1YDR545W CLN2P20438 545 aa8.02□□□□□ -1.13
YRF1-1YDR545W DGR2P32330 852 aa8.02□□□□□ -1.13
YRF1-1YDR545W PET112P33893 541 aa8.02□□□□□ -1.13
YRF1-1YDR545W MSB3P48566 633 aaPredicted RBP8.02□□□□□ -1.13
YRF1-1YDR545W RFX1P48743 811 aa8.02□□□□□ -1.13
YRF1-1YDR545W ATG1P53104 897 aa8.02□□□□□ -1.13
YRF1-1YDR545W YMR027WQ04371 470 aa8.02□□□□□ -1.13
YRF1-1YDR545W GYP6P32806 458 aa8.02□□□□□ -1.13
YRF1-1YDR545W DPH1P40487 425 aaKnown RBP8.02□□□□□ -1.13
YRF1-1YDR545W UIP4Q08926 304 aa8.02□□□□□ -1.13
YRF1-1YDR545W CLF1Q12309 687 aaPredicted RBP8.02□□□□□ -1.13
YRF1-1YDR545W KAR4P25583 335 aa8.01□□□□□ -1.13
YRF1-1YDR545W PEA2P40091 420 aa8.01□□□□□ -1.13
YRF1-1YDR545W PIP2P52960 996 aa8.01□□□□□ -1.13
YRF1-1YDR545W ATG26Q06321 1198 aa8.01□□□□□ -1.13
YRF1-1YDR545W STI1P15705 589 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13 RIP-Chip
YRF1-1YDR545W SRL3P36167 246 aa8.01□□□□□ -1.13
YRF1-1YDR545W STN1P38960 494 aa8.01□□□□□ -1.13
YRF1-1YDR545W PPM1Q04081 328 aa8.01□□□□□ -1.13
YRF1-1YDR545W MEU1Q07938 337 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
YRF1-1YDR545W PGK1P00560 416 aaKnown RBP8.01□□□□□ -1.13
YRF1-1YDR545W YAK1P14680 807 aa8.01□□□□□ -1.13
YRF1-1YDR545W POL30P15873 258 aaKnown RBP8.01□□□□□ -1.13
YRF1-1YDR545W NPP1P25353 742 aa8.01□□□□□ -1.13
YRF1-1YDR545W RPL8BP29453 256 aaKnown RBP8.01□□□□□ -1.13
YRF1-1YDR545W TBS1P38114 1094 aa8.01□□□□□ -1.13
YRF1-1YDR545W UBP16Q02863 499 aa8.01□□□□□ -1.13
YRF1-1YDR545W INM2Q05533 292 aa8.01□□□□□ -1.13
YRF1-1YDR545W MED1Q12321 566 aa8.01□□□□□ -1.13
YRF1-1YDR545W FOB1O13329 566 aa8.01□□□□□ -1.13
YRF1-1YDR545W ITR2P30606 609 aa8.01□□□□□ -1.13
YRF1-1YDR545W DCP2P53550 970 aaKnown RBP8.01□□□□□ -1.13
YRF1-1YDR545W YMR187CQ03236 431 aa8.01□□□□□ -1.13
YRF1-1YDR545W SPO71Q03868 1245 aa8.01□□□□□ -1.13
YRF1-1YDR545W LSO1Q3E827 93 aa8.01□□□□□ -1.13
YRF1-1YDR545W CLN3P13365 580 aa8□□□□□ -1.13
YRF1-1YDR545W SEC21P32074 935 aaKnown RBP8□□□□□ -1.13
YRF1-1YDR545W AST1P35183 429 aa8□□□□□ -1.13
YRF1-1YDR545W CUE2P36075 443 aaKnown RBP8□□□□□ -1.13
YRF1-1YDR545W YNL040WP53960 456 aaPredicted RBP8□□□□□ -1.13
YRF1-1YDR545W DIG1Q03063 452 aaKnown RBP8□□□□□ -1.13
YRF1-1YDR545W MTG1Q03151 367 aaPredicted RBP8□□□□□ -1.13
YRF1-1YDR545W LYS14P40971 790 aa8□□□□□ -1.13
YRF1-1YDR545W CNM67P53865 581 aaKnown RBP8□□□□□ -1.13
YRF1-1YDR545W YLR053CQ12026 108 aa8□□□□□ -1.13
YRF1-1YDR545W RGR1P19263 1082 aa8□□□□□ -1.13
YRF1-1YDR545W RAD16P31244 790 aa8□□□□□ -1.13
YRF1-1YDR545W DUR3P33413 735 aa8□□□□□ -1.13
YRF1-1YDR545W RRN3P36070 627 aa8□□□□□ -1.13
YRF1-1YDR545W GIP1P38229 639 aa8□□□□□ -1.13
YRF1-1YDR545W SBE2P42223 864 aaKnown RBP8□□□□□ -1.13
YRF1-1YDR545W AAD16Q02895 342 aa8□□□□□ -1.13
YRF1-1YDR545W ENT2Q05785 613 aa8□□□□□ -1.13
YRF1-1YDR545W PUF3Q07807 879 aaKnown RBP RIP-Chip data8□□□□□ -1.13not detected
YRF1-1YDR545W RPN8Q08723 338 aaKnown RBP8□□□□□ -1.13
YRF1-1YDR545W URB1P34241 1764 aaKnown RBP8□□□□□ -1.13
YRF1-1YDR545W CKA2P19454 339 aa8□□□□□ -1.13
YRF1-1YDR545W FAR1P21268 830 aa8□□□□□ -1.13
YRF1-1YDR545W MRM1P25270 412 aa8□□□□□ -1.13
YRF1-1YDR545W KTR2P33550 425 aa8□□□□□ -1.13
YRF1-1YDR545W LEM3P42838 414 aa8□□□□□ -1.13
YRF1-1YDR545W MSN5P52918 1224 aa8□□□□□ -1.13
YRF1-1YDR545W CYB2P00175 591 aa7.99□□□□□ -1.13
YRF1-1YDR545W SNF1P06782 633 aaKnown RBP7.99□□□□□ -1.13
YRF1-1YDR545W ERG11P10614 530 aa7.99□□□□□ -1.13
YRF1-1YDR545W YBR138CP38277 524 aa7.99□□□□□ -1.13
YRF1-1YDR545W YBP1P38315 674 aa7.99□□□□□ -1.13
YRF1-1YDR545W LIA1P47120 325 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms