RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C ECM32P32644 1121 aaKnown RBP6.16□□□□□ -1.42
SEC20YDR498C GCG1P32656 232 aaKnown RBP6.16□□□□□ -1.42
SEC20YDR498C YKL050CP35736 922 aa6.16□□□□□ -1.42
SEC20YDR498C YKR018CP36114 725 aa6.16□□□□□ -1.42
SEC20YDR498C PAC1P39946 494 aaKnown RBP6.16□□□□□ -1.42
SEC20YDR498C HMF1P40037 129 aaKnown RBP6.16□□□□□ -1.42
SEC20YDR498C HXT8P40886 569 aa6.16□□□□□ -1.42
SEC20YDR498C BRO1P48582 844 aa6.16□□□□□ -1.42
SEC20YDR498C ASN1P49089 572 aaKnown RBP6.16□□□□□ -1.42
SEC20YDR498C KAP114P53067 1004 aa6.16□□□□□ -1.42
SEC20YDR498C YDR222WQ04925 415 aa6.16□□□□□ -1.42
SEC20YDR498C NOP6Q07623 225 aaKnown RBP6.16□□□□□ -1.42
SEC20YDR498C TRM11Q12463 433 aa6.16□□□□□ -1.42
SEC20YDR498C YEL077CQ3E7X8 1277 aa6.16□□□□□ -1.42
SEC20YDR498C YLR422WQ06409 1932 aa6.15□□□□□ -1.42
SEC20YDR498C CDC19P00549 500 aaKnown RBP6.15□□□□□ -1.42
SEC20YDR498C COX4P04037 155 aa6.15□□□□□ -1.42
SEC20YDR498C PRP9P19736 530 aaKnown RBP6.15□□□□□ -1.42
SEC20YDR498C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
SEC20YDR498C EFT1P32324 842 aaKnown RBP6.15□□□□□ -1.42
SEC20YDR498C MOT2P34909 587 aaKnown RBP6.15□□□□□ -1.42
SEC20YDR498C NCL1P38205 684 aaKnown RBP6.15□□□□□ -1.42
SEC20YDR498C KSP1P38691 1029 aaKnown RBP6.15□□□□□ -1.42
SEC20YDR498C SAP1P39955 897 aaKnown RBP6.15□□□□□ -1.42
SEC20YDR498C EAF5P39995 279 aa6.15□□□□□ -1.42
SEC20YDR498C NPP2P39997 493 aa6.15□□□□□ -1.42
SEC20YDR498C YNL320WP42840 284 aa6.15□□□□□ -1.42
SEC20YDR498C CTK3P46963 296 aaPredicted RBP6.15□□□□□ -1.42
SEC20YDR498C CPR7P47103 393 aa6.15□□□□□ -1.42
SEC20YDR498C HSH155P49955 971 aaKnown RBP6.15□□□□□ -1.42
SEC20YDR498C MNP1P53163 194 aaPredicted RBP6.15□□□□□ -1.42
SEC20YDR498C PUS2P53167 370 aa6.15□□□□□ -1.42
SEC20YDR498C RIM8P53179 542 aa6.15□□□□□ -1.42
SEC20YDR498C CWC22P53333 577 aaKnown RBP6.15□□□□□ -1.42
SEC20YDR498C AGE1Q04412 482 aa6.15□□□□□ -1.42
SEC20YDR498C OPY2Q06810 360 aa6.15□□□□□ -1.42
SEC20YDR498C OSH2Q12451 1283 aa6.15□□□□□ -1.42
SEC20YDR498C ZPS1Q12512 249 aa6.15□□□□□ -1.42
SEC20YDR498C RAS1P01119 309 aa6.14□□□□□ -1.43
SEC20YDR498C RPL4AP10664 362 aaKnown RBP6.14□□□□□ -1.43
SEC20YDR498C AMS1P22855 1083 aa6.14□□□□□ -1.43
SEC20YDR498C SEC8P32855 1065 aa6.14□□□□□ -1.43
SEC20YDR498C PIN4P34217 668 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
SEC20YDR498C RRP1P35178 278 aaPredicted RBP6.14□□□□□ -1.43
SEC20YDR498C ATG19P35193 415 aa6.14□□□□□ -1.43
SEC20YDR498C CAB3P36076 571 aa6.14□□□□□ -1.43
SEC20YDR498C LCP5P40079 357 aaPredicted RBP6.14□□□□□ -1.43
SEC20YDR498C ASG1P40467 964 aa6.14□□□□□ -1.43
SEC20YDR498C RPL4BP49626 362 aaKnown RBP6.14□□□□□ -1.43
SEC20YDR498C SYH1Q02875 849 aaKnown RBP6.14□□□□□ -1.43
SEC20YDR498C TRS130Q03660 1102 aa6.14□□□□□ -1.43
SEC20YDR498C VTI1Q04338 217 aa6.14□□□□□ -1.43
SEC20YDR498C TDA9Q04545 1251 aa6.14□□□□□ -1.43
SEC20YDR498C ECI1Q05871 280 aa6.14□□□□□ -1.43
SEC20YDR498C SMC5Q08204 1093 aa6.14□□□□□ -1.43
SEC20YDR498C NUR1Q12066 484 aa6.14□□□□□ -1.43
SEC20YDR498C VPS13Q07878 3144 aa6.14□□□□□ -1.43
SEC20YDR498C PYC1P11154 1178 aaKnown RBP6.13□□□□□ -1.43
SEC20YDR498C MAS2P11914 482 aa6.13□□□□□ -1.43
SEC20YDR498C POX1P13711 748 aa6.13□□□□□ -1.43
SEC20YDR498C EST1P17214 699 aaPredicted RBP6.13□□□□□ -1.43
SEC20YDR498C YJU3P28321 313 aa6.13□□□□□ -1.43
SEC20YDR498C TMT1P32643 299 aa6.13□□□□□ -1.43
SEC20YDR498C BCS1P32839 456 aa6.13□□□□□ -1.43
SEC20YDR498C CSG2P35206 410 aa6.13□□□□□ -1.43
SEC20YDR498C MUD2P36084 527 aaKnown RBP6.13□□□□□ -1.43
SEC20YDR498C BYE1P36106 594 aa6.13□□□□□ -1.43
SEC20YDR498C APE3P37302 537 aaKnown RBP6.13□□□□□ -1.43
SEC20YDR498C MRX3P38172 270 aa6.13□□□□□ -1.43
SEC20YDR498C VID24P38263 362 aa6.13□□□□□ -1.43
SEC20YDR498C GUA1P38625 525 aaKnown RBP6.13□□□□□ -1.43
SEC20YDR498C TDA3P38758 523 aa6.13□□□□□ -1.43
SEC20YDR498C PHO86P46956 311 aa6.13□□□□□ -1.43
SEC20YDR498C NMD5P46970 1048 aa6.13□□□□□ -1.43
SEC20YDR498C CUL3P53202 744 aa6.13□□□□□ -1.43
SEC20YDR498C TBF1Q02457 562 aa6.13□□□□□ -1.43
SEC20YDR498C YMR018WQ04364 514 aa6.13□□□□□ -1.43
SEC20YDR498C UTP13Q05946 817 aaKnown RBP6.13□□□□□ -1.43
SEC20YDR498C RGA2Q06407 1009 aa6.13□□□□□ -1.43
SEC20YDR498C MSC6Q08818 692 aaKnown RBP6.13□□□□□ -1.43
SEC20YDR498C SPO21Q12411 609 aa6.13□□□□□ -1.43
SEC20YDR498C AI5_BETAQ9ZZX0 354 aa6.13□□□□□ -1.43
SEC20YDR498C BI2P03873 423 aa6.12□□□□□ -1.43
SEC20YDR498C BI4P03879 638 aa6.12□□□□□ -1.43
SEC20YDR498C RAD10P06838 210 aa6.12□□□□□ -1.43
SEC20YDR498C CDC33P07260 213 aaKnown RBP6.12□□□□□ -1.43
SEC20YDR498C SWI6P09959 803 aa6.12□□□□□ -1.43
SEC20YDR498C PUF4P25339 888 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
SEC20YDR498C RRT12P25381 491 aa6.12□□□□□ -1.43
SEC20YDR498C GPI10P30777 616 aa6.12□□□□□ -1.43
SEC20YDR498C RME1P32338 300 aaKnown RBP6.12□□□□□ -1.43
SEC20YDR498C RRN6P32786 894 aa6.12□□□□□ -1.43
SEC20YDR498C PEX2P32800 271 aa6.12□□□□□ -1.43
SEC20YDR498C CNS1P33313 385 aa6.12□□□□□ -1.43
SEC20YDR498C RGD1P38339 666 aa6.12□□□□□ -1.43
SEC20YDR498C ETP1P38748 585 aaKnown RBP6.12□□□□□ -1.43
SEC20YDR498C ASG7P46993 209 aa6.12□□□□□ -1.43
SEC20YDR498C DAS1P47005 663 aa6.12□□□□□ -1.43
SEC20YDR498C COS5P47187 383 aa6.12□□□□□ -1.43
SEC20YDR498C HUL5P53119 910 aa6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 73.6 ms