RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W PPZ2P33329 710 aa4.53□□□□□ -1.68
RSM28YDR494W SPC29P33419 253 aa4.53□□□□□ -1.68
RSM28YDR494W PBP2P38151 413 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
RSM28YDR494W CBR1P38626 284 aaKnown RBP4.53□□□□□ -1.68
RSM28YDR494W HIR1P32479 840 aa4.52□□□□□ -1.69
RSM28YDR494W CHZ1P40019 153 aaPredicted RBP4.52□□□□□ -1.69
RSM28YDR494W MET6P05694 767 aaKnown RBP4.51□□□□□ -1.69
RSM28YDR494W TUB1P09733 447 aaKnown RBP4.51□□□□□ -1.69
RSM28YDR494W PER1P25625 357 aa4.51□□□□□ -1.69
RSM28YDR494W RIX1P38883 763 aaPredicted RBP4.51□□□□□ -1.69
RSM28YDR494W ECM1P39715 212 aa4.51□□□□□ -1.69
RSM28YDR494W OSW7P43611 510 aa4.51□□□□□ -1.69
RSM28YDR494W SMX3P54999 86 aaPredicted RBP4.51□□□□□ -1.69
RSM28YDR494W GAD1Q04792 585 aa4.51□□□□□ -1.69
RSM28YDR494W FPR4Q06205 392 aaPredicted RBP4.51□□□□□ -1.69
RSM28YDR494W YIL166CP40445 542 aa4.5□□□□□ -1.69
RSM28YDR494W BUD6P41697 788 aa4.5□□□□□ -1.69
RSM28YDR494W YAP1802P53309 568 aa4.5□□□□□ -1.69
RSM28YDR494W YDR338CQ05497 695 aa4.5□□□□□ -1.69
RSM28YDR494W SIR3P06701 978 aa4.49□□□□□ -1.69
RSM28YDR494W DMC1P25453 334 aa4.49□□□□□ -1.69
RSM28YDR494W ILV6P25605 309 aaKnown RBP4.49□□□□□ -1.69
RSM28YDR494W FLO10P36170 1169 aa4.49□□□□□ -1.69
RSM28YDR494W REV7P38927 245 aa4.49□□□□□ -1.69
RSM28YDR494W ALY2P47029 1046 aa4.49□□□□□ -1.69
RSM28YDR494W IMO32P53219 342 aa4.49□□□□□ -1.69
RSM28YDR494W TAF3Q12297 353 aa4.49□□□□□ -1.69
RSM28YDR494W CIT2P08679 460 aa4.48□□□□□ -1.69
RSM28YDR494W ERR1P0CX10 437 aa4.48□□□□□ -1.69
RSM28YDR494W ERR2P0CX11 437 aa4.48□□□□□ -1.69
RSM28YDR494W TIM23P32897 222 aa4.48□□□□□ -1.69
RSM28YDR494W CCT3P39077 534 aaKnown RBP4.48□□□□□ -1.69
RSM28YDR494W YJL206CP39529 758 aa4.48□□□□□ -1.69
RSM28YDR494W NUP82P40368 713 aa4.48□□□□□ -1.69
RSM28YDR494W CCT7P42943 550 aaKnown RBP4.48□□□□□ -1.69
RSM28YDR494W PRP31P49704 494 aaPredicted RBP4.48□□□□□ -1.69
RSM28YDR494W YBP2P53169 641 aa4.48□□□□□ -1.69
RSM28YDR494W ARO10Q06408 635 aa4.48□□□□□ -1.69
RSM28YDR494W ADY2P25613 283 aa4.47□□□□□ -1.69
RSM28YDR494W YHR112CP38716 378 aa4.47□□□□□ -1.69
RSM28YDR494W NDC80P40460 691 aa4.47□□□□□ -1.69
RSM28YDR494W MTL1P53214 551 aa4.47□□□□□ -1.69
RSM28YDR494W ORC1P54784 914 aaPredicted RBP4.47□□□□□ -1.69
RSM28YDR494W COQ11Q05892 277 aa4.47□□□□□ -1.69
RSM28YDR494W PYC1P11154 1178 aaKnown RBP4.46□□□□□ -1.7
RSM28YDR494W PHO8P11491 566 aa4.46□□□□□ -1.7
RSM28YDR494W ADE2P21264 571 aaKnown RBP4.46□□□□□ -1.7
RSM28YDR494W LYS9P38999 446 aa4.46□□□□□ -1.7
RSM28YDR494W SNM1P40993 198 aa4.46□□□□□ -1.7
RSM28YDR494W PAN2P53010 1115 aaPredicted RBP4.46□□□□□ -1.7
RSM28YDR494W CTK1Q03957 528 aaKnown RBP4.46□□□□□ -1.7
RSM28YDR494W YLR125WQ12138 136 aa4.46□□□□□ -1.7
RSM28YDR494W YKL033W-AQ86ZR7 236 aa4.46□□□□□ -1.7
RSM28YDR494W MTC2P34246 357 aa4.45□□□□□ -1.7
RSM28YDR494W APL2P36000 726 aaPredicted RBP4.45□□□□□ -1.7
RSM28YDR494W FMO1P38866 432 aa4.45□□□□□ -1.7
RSM28YDR494W GDH3P39708 457 aa4.45□□□□□ -1.7
RSM28YDR494W ARG5,6Q01217 863 aa4.45□□□□□ -1.7
RSM28YDR494W YNL162W-AQ3E7A8 72 aa4.45□□□□□ -1.7
RSM28YDR494W YLR149CQ99296 730 aa4.45□□□□□ -1.7
RSM28YDR494W THI4P32318 326 aa4.44□□□□□ -1.7
RSM28YDR494W MVD1P32377 396 aaKnown RBP4.44□□□□□ -1.7
RSM28YDR494W EMP70P32802 667 aa4.44□□□□□ -1.7
RSM28YDR494W PPG1P32838 368 aa4.44□□□□□ -1.7
RSM28YDR494W UBS1P38290 277 aa4.44□□□□□ -1.7
RSM28YDR494W SFB3P38810 929 aa4.44□□□□□ -1.7
RSM28YDR494W RNH70P53331 553 aa4.44□□□□□ -1.7
RSM28YDR494W APM1Q00776 475 aaPredicted RBP4.44□□□□□ -1.7
RSM28YDR494W MDM10P18409 493 aa4.43□□□□□ -1.7
RSM28YDR494W MCD4P36051 919 aa4.43□□□□□ -1.7
RSM28YDR494W TRZ1P36159 838 aaPredicted RBP4.43□□□□□ -1.7
RSM28YDR494W HRB1P38922 454 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
RSM28YDR494W NUP60P39705 539 aa4.43□□□□□ -1.7
RSM28YDR494W ARG2P40360 574 aa4.43□□□□□ -1.7
RSM28YDR494W BNA2P47125 453 aa4.43□□□□□ -1.7
RSM28YDR494W MAL11P53048 616 aa4.43□□□□□ -1.7
RSM28YDR494W ORC4P54791 529 aa4.43□□□□□ -1.7
RSM28YDR494W HRP1Q99383 534 aaKnown RBP4.43□□□□□ -1.7
RSM28YDR494W ERG6P25087 383 aaKnown RBP4.42□□□□□ -1.7
RSM28YDR494W GLG1P36143 616 aa4.42□□□□□ -1.7
RSM28YDR494W MIP6P38760 659 aaKnown RBP4.42□□□□□ -1.7
RSM28YDR494W BDH2P39713 417 aa4.42□□□□□ -1.7
RSM28YDR494W YFL052WP43551 465 aa4.42□□□□□ -1.7
RSM28YDR494W CTR1P49573 406 aa4.42□□□□□ -1.7
RSM28YDR494W FHN1P53279 174 aa4.42□□□□□ -1.7
RSM28YDR494W MCM21Q06675 368 aa4.42□□□□□ -1.7
RSM28YDR494W Q0142Q9ZZW4 58 aa4.42□□□□□ -1.7
RSM28YDR494W SPO11P23179 398 aa4.41□□□□□ -1.7
RSM28YDR494W PHO11P35842 467 aa4.41□□□□□ -1.7
RSM28YDR494W APT2P36973 181 aa4.41□□□□□ -1.7
RSM28YDR494W PHO12P38693 467 aa4.41□□□□□ -1.7
RSM28YDR494W YEL020CP39994 560 aa4.41□□□□□ -1.7
RSM28YDR494W RGC1Q06108 1083 aaKnown RBP4.41□□□□□ -1.7
RSM28YDR494W MLH3Q12083 715 aa4.41□□□□□ -1.7
RSM28YDR494W NPY1P53164 384 aa4.4□□□□□ -1.71
RSM28YDR494W ALG12P53730 551 aa4.4□□□□□ -1.71
RSM28YDR494W ATG4P53867 494 aa4.4□□□□□ -1.71
RSM28YDR494W POB3Q04636 552 aaKnown RBP4.4□□□□□ -1.71
RSM28YDR494W HOF1Q05080 669 aa4.4□□□□□ -1.71
RSM28YDR494W THI7Q05998 598 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms